Sumanta Ray

27 papers B 1Journal 18Unranked 7
YearRankTypeTitle / Venue / Authors
2025 J jnl
Enhancing Single-Cell RNA-Seq Data Completeness With a Graph Learning Framework.
IEEE Trans. Comput. Biol. Bioinform.
Snehalika Lall, Sumanta Ray, Sanghamitra Bandyopadhyay
2025 J jnl
Two-stage copula-driven, structure-aware gene selection for single-cell analysis.
Array
Sumanta Ray, Snehalika Lall, Sanghamitra Bandyopadhyay
2024 — book
Multiobjective Optimization Algorithms for Bioinformatics
Anirban Mukhopadhyay, Sumanta Ray, Ujjwal Maulik, Sanghamitra Bandyopadhyay
2023 — conf
An Autoencoder-based Deep Learning Approach for Classifying Colon and Rectum Adenocarcinoma.
ICCCNT
Lutfunnesa Khatun, Sk Md Mosaddek Hossain, Sumanta Ray, Anirban Mukhopadhyay
2023 — conf
Predicting Disease-Associated Genes Through Interaction and Ontology-Based Inference Technique.
CICBA (2)
Syed Alberuni, Sumanta Ray
2022 J jnl
A Deep Integrated Framework for Predicting SARS-CoV2-Human Protein-Protein Interaction.
IEEE Trans. Emerg. Top. Comput. Intell.
Sumanta Ray, Snehalika Lall, Sanghamitra Bandyopadhyay
2022 J jnl
A copula based topology preserving graph convolution network for clustering of single-cell RNA-seq data.
PLoS Comput. Biol.
Snehalika Lall, Sumanta Ray, Sanghamitra Bandyopadhyay
2022 J jnl
Deep variational graph autoencoders for novel host-directed therapy options against COVID-19.
Artif. Intell. Medicine
Sumanta Ray, Snehalika Lall, Anirban Mukhopadhyay, Sanghamitra Bandyopadhyay, Alexander Schönhuth
2022 J jnl
Systematic mining of patterns of polysubstance use in a nationwide population survey.
Comput. Biol. Medicine
Sumanta Ray, Meghana Desai, Saumyadipta Pyne
2022 J jnl
sc-REnF: An entropy guided robust feature selection for single-cell RNA-seq data.
Briefings Bioinform.
Snehalika Lall, Abhik Ghosh, Sumanta Ray, Sanghamitra Bandyopadhyay
2021 J jnl
Colored Network Motif Analysis by Dynamic Programming Approach: An Application in Host Pathogen Interaction Network.
IEEE ACM Trans. Comput. Biol. Bioinform.
Sourav Biswas, Sumanta Ray, Sanghamitra Bandyopadhyay
2021 J jnl
RgCop-A regularized copula based method for gene selection in single-cell RNA-seq data.
PLoS Comput. Biol.
Snehalika Lall, Sumanta Ray, Sanghamitra Bandyopadhyay
2020 J jnl
DTI-SNNFRA: Drug-Target interaction prediction by shared nearest neighbors and fuzzy-rough approximation.
CoRR
Seikh Mazharul Islam, Sk Md Mosaddek Hossain, Sumanta Ray
2019 — conf
Identification of Hub Genes and Key Modules in Stomach Adenocarcinoma Using nsNMF-Based Data Integration Technique.
ICIT
Sk Md Mosaddek Hossain, Sumanta Ray, Anirban Mukhopadhyay
2018 J jnl
Discovering Perturbation of Modular Structure in HIV Progression by Integrating Multiple Data Sources Through Non-Negative Matrix Factorization.
IEEE ACM Trans. Comput. Biol. Bioinform.
Sumanta Ray, Ujjwal Maulik
2017 J jnl
A comprehensive analysis on preservation patterns of gene co-expression networks during Alzheimer's disease progression.
BMC Bioinform.
Sumanta Ray, Sk Md Mosaddek Hossain, Lutfunnesa Khatun, Anirban Mukhopadhyay
2017 — conf
Integrating Multi-view Data: A Hypergraph Based Approach.
CICBA (2)
Saif Ayan Khan, Sumanta Ray
2017 J jnl
Preservation affinity in consensus modules among stages of HIV-1 progression.
BMC Bioinform.
Sk Md Mosaddek Hossain, Sumanta Ray, Anirban Mukhopadhyay
2017 — conf
Topological Inquisition into the PPI Networks Associated with Human Diseases Through Graphlet Frequency Distribution.
PReMI
Debjani Bhattacharjee, Sk Md Mosaddek Hossain, Raziya Sultana, Sumanta Ray
2016 J jnl
A NMF based approach for integrating multiple data sources to predict HIV-1-human PPIs.
BMC Bioinform.
Sumanta Ray, Sanghamitra Bandyopadhyay
2016 J jnl
Discovering Condition Specific Topological Pattern Changes in Coexpression Network: An Application to HIV-1 Progression.
IEEE ACM Trans. Comput. Biol. Bioinform.
Sumanta Ray, Sanghamitra Bandyopadhyay
2016 — conf
Discovering preservation pattern from co-expression modules in progression of HIV-1 disease: An eigengene based approach.
ICACCI
Sumanta Ray, Sk Md Mosaddek Hossain, Lutfunnesa Khatun
2015 J jnl
A multiobjective approach for identifying protein complexes and studying their association in multiple disorders.
Algorithms Mol. Biol.
Sanghamitra Bandyopadhyay, Sumanta Ray, Anirban Mukhopadhyay, Ujjwal Maulik
2015 J jnl
A review of
Briefings Bioinform.
Sanghamitra Bandyopadhyay, Sumanta Ray, Anirban Mukhopadhyay, Ujjwal Maulik
2015 — conf
DCoSpect: A Novel Differentially Coexpressed Gene Module Detection Algorithm Using Spectral Clustering.
FICTA
Sumanta Ray, Sinchani Chakraborty, Anirban Mukhopadhyay
2014 J jnl
Incorporating the type and direction information in predicting novel regulatory interactions between HIV-1 and human proteins using a biclustering approach.
BMC Bioinform.
Anirban Mukhopadhyay, Sumanta Ray, Ujjwal Maulik
2013 B conf
Incorporating fuzzy semantic similarity measure in detecting human protein complexes in PPI network: A multiobjective approach.
FUZZ-IEEE
Sumanta Ray, Sanghamitra Bandyopadhyay, Anirban Mukhopadhyay, Ujjwal Maulik