Stephen M. Smith

149 papers A* 2A 3B 3Misc 1Journal 124Unranked 16

Year	Rank	Type	Title / Venue / Authors
2023	—	`conf`	A Transfer Learning Approach to Localising a Deep Brain Stimulation Target. MICCAI (9) Ying-Qiu Zheng, Harith Akram, Stephen M. Smith, Saâd Jbabdi
2023	J	`jnl`	Amplitudes of resting-state functional networks - investigation into their correlates and biophysical properties. NeuroImage Soojin Lee, Janine D. Bijsterbosch, Fidel Alfaro-Almagro, Lloyd T. Elliott, Paul McCarthy, Bernd Taschler, Roser Sala-Llonch, Christian F. Beckmann, Eugene P. Duff, Stephen M. Smith, Gwenaëlle Douaud
2023	—	`conf`	Brain Ages Derived from Different MRI Modalities are Associated with Distinct Biological Phenotypes. SDS Andrei Claudiu Roibu, Stanislaw Adaszewski, Torsten Schindler, Stephen M. Smith, Ana I. L. Namburete, Frederik J. Lange
2023	J	`jnl`	ICAM-Reg: Interpretable Classification and Regression With Feature Attribution for Mapping Neurological Phenotypes in Individual Scans. IEEE Trans. Medical Imaging Cher Bass, Mariana da Silva, Carole H. Sudre, Logan Z. J. Williams, Helena S. Sousa, Petru-Daniel Tudosiu, Fidel Alfaro-Almagro, Sean P. Fitzgibbon, Matthew F. Glasser, Stephen M. Smith, Emma C. Robinson
2023	J	`jnl`	Supervised Phenotype Discovery From Multimodal Brain Imaging. IEEE Trans. Medical Imaging Weikang Gong, Song Bai, Ying-Qiu Zheng, Stephen M. Smith, Christian F. Beckmann
2022	J	`jnl`	Accurate predictions of individual differences in task-evoked brain activity from resting-state fMRI using a sparse ensemble learner. NeuroImage Ying-Qiu Zheng, Seyedeh-Rezvan Farahibozorg, Weikang Gong, Hossein Rafipoor, Saâd Jbabdi, Stephen M. Smith
2022	J	`jnl`	Causal inference on neuroimaging data with Mendelian randomisation. NeuroImage Bernd Taschler, Stephen M. Smith, Thomas E. Nichols
2022	J	`jnl`	Deep neural networks learn general and clinically relevant representations of the ageing brain. NeuroImage Esten H. Leonardsen, Han Peng, Tobias Kaufmann, Ingrid Agartz, Ole A. Andreassen, Elisabeth Gulowsen Celius, Thomas Espeseth, Hanne F. Harbo, Einar A. Høgestøl, Ann-Marie G. de Lange, Andre F. Marquand, Dídac Vidal-Piñeiro, James M. Roe, Geir Selbæk, Øystein Sørensen, Stephen M. Smith, Lars T. Westlye, Thomas Wolfers, Yunpeng Wang
2022	J	`jnl`	Multi-dynamic modelling reveals strongly time-varying resting fMRI correlations. Medical Image Anal. Usama Pervaiz, Diego Vidaurre, Chetan Gohil, Stephen M. Smith, Mark W. Woolrich
2021	J	`jnl`	Accurate brain age prediction with lightweight deep neural networks. Medical Image Anal. Han Peng, Weikang Gong, Christian F. Beckmann, Andrea Vedaldi, Stephen M. Smith
2021	J	`jnl`	Behavioural relevance of spontaneous, transient brain network interactions in fMRI. NeuroImage Diego Vidaurre, Alberto Llera, Stephen M. Smith, Mark W. Woolrich
2021	J	`jnl`	Challenges for machine learning in clinical translation of big data imaging studies. CoRR Nicola K. Dinsdale, Emma Bluemke, Vaanathi Sundaresan, Mark Jenkinson, Stephen M. Smith, Ana I. L. Namburete
2021	J	`jnl`	Confound modelling in UK Biobank brain imaging. NeuroImage Fidel Alfaro-Almagro, Paul McCarthy, Soroosh Afyouni, Jesper L. R. Andersson, Matteo Bastiani, Karla L. Miller, Thomas E. Nichols, Stephen M. Smith
2021	J	`jnl`	Hierarchical modelling of functional brain networks in population and individuals from big fMRI data. NeuroImage Seyedeh-Rezvan Farahibozorg, Janine D. Bijsterbosch, Weikang Gong, Saâd Jbabdi, Stephen M. Smith, Samuel J. Harrison, Mark W. Woolrich
2021	J	`jnl`	ICAM-reg: Interpretable Classification and Regression with Feature Attribution for Mapping Neurological Phenotypes in Individual Scans. CoRR Cher Bass, Mariana da Silva, Carole H. Sudre, Logan Z. J. Williams, Petru-Daniel Tudosiu, Fidel Alfaro-Almagro, Sean P. Fitzgibbon, Matthew F. Glasser, Stephen M. Smith, Emma C. Robinson
2021	J	`jnl`	Learning patterns of the ageing brain in MRI using deep convolutional networks. NeuroImage Nicola K. Dinsdale, Emma Bluemke, Stephen M. Smith, Zobair Arya, Diego Vidaurre, Mark Jenkinson, Ana I. L. Namburete
2021	J	`jnl`	Phenotype discovery from population brain imaging. Medical Image Anal. Weikang Gong, Christian F. Beckmann, Stephen M. Smith
2021	J	`jnl`	The Human Connectome Project: A retrospective. NeuroImage Jennifer Stine Elam, Matthew F. Glasser, Michael P. Harms, Stamatios N. Sotiropoulos, Jesper L. R. Andersson, Gregory C. Burgess, Sandra W. Curtiss, Robert Oostenveld, Linda J. Larson-Prior, Jan-Mathijs Schoffelen, Michael R. Hodge, Eileen A. Cler, Daniel M. Marcus, Deanna M. Barch, Essa Yacoub, Stephen M. Smith, Kâmil Ugurbil, David C. Van Essen
2021	J	`jnl`	The nonhuman primate neuroimaging and neuroanatomy project. NeuroImage Takuya Hayashi, Yujie Hou, Matthew F. Glasser, Joonas A. A. Autio, Kenneth Knoblauch, Miho Inoue-Murayama, Timothy S. Coalson, Essa Yacoub, Stephen M. Smith, Henry Kennedy, David C. Van Essen
2020	J	`jnl`	A Symmetric Prior for the Regularisation of Elastic Deformations: Improved anatomical plausibility in nonlinear image registration. NeuroImage Frederik J. Lange, John Ashburner, Stephen M. Smith, Jesper L. R. Andersson
2020	J	`jnl`	Denoising scanner effects from multimodal MRI data using linked independent component analysis. NeuroImage Huanjie Li, Stephen M. Smith, Staci Gruber, Scott E. Lukas, Marisa M. Silveri, Kevin P. Hill, William D. S. Killgore, Lisa D. H. Nickerson
2020	A*	`conf`	ICAM: Interpretable Classification via Disentangled Representations and Feature Attribution Mapping. NeurIPS Cher Bass, Mariana da Silva, Carole H. Sudre, Petru-Daniel Tudosiu, Stephen M. Smith, Emma C. Robinson
2020	J	`jnl`	ICAM: Interpretable Classification via Disentangled Representations and Feature Attribution Mapping. CoRR Cher Bass, Mariana da Silva, Carole H. Sudre, Petru-Daniel Tudosiu, Stephen M. Smith, Emma C. Robinson
2020	J	`jnl`	Modelling subject variability in the spatial and temporal characteristics of functional modes. NeuroImage Samuel J. Harrison, Janine D. Bijsterbosch, Andrew R. Segerdahl, Sean P. Fitzgibbon, Seyedeh-Rezvan Farahibozorg, Eugene P. Duff, Stephen M. Smith, Mark W. Woolrich
2020	—	`conf`	Multimodal MRI Template Creation in the Ring-Tailed Lemur and Rhesus Macaque. WBIR Frederik J. Lange, Stephen M. Smith, Mads F. Bertelsen, Alexandre A. Khrapitchev, Paul R. Manger, Rogier B. Mars, Jesper L. R. Andersson
2020	J	`jnl`	Optimising network modelling methods for fMRI. NeuroImage Usama Pervaiz, Diego Vidaurre, Mark W. Woolrich, Stephen M. Smith
2020	J	`jnl`	Permutation inference for canonical correlation analysis. NeuroImage Anderson M. Winkler, Olivier Renaud, Stephen M. Smith, Thomas E. Nichols
2019	J	`jnl`	Automated processing pipeline for neonatal diffusion MRI in the developing Human Connectome Project. NeuroImage Matteo Bastiani, Jesper L. R. Andersson, Lucilio Cordero-Grande, Maria Murgasova, Jana Hutter, Anthony N. Price, Antonios Makropoulos, Sean P. Fitzgibbon, Emer J. Hughes, Daniel Rueckert, Suresh Victor, Mary A. Rutherford, A. David Edwards, Stephen M. Smith, Jacques-Donald Tournier, Joseph V. Hajnal, Saâd Jbabdi, Stamatios N. Sotiropoulos
2019	J	`jnl`	Classification of temporal ICA components for separating global noise from fMRI data: Reply to Power. NeuroImage Matthew F. Glasser, Timothy S. Coalson, Janine D. Bijsterbosch, Samuel J. Harrison, Michael P. Harms, Alan Anticevic, David C. Van Essen, Stephen M. Smith
2019	J	`jnl`	Effective degrees of freedom of the Pearson's correlation coefficient under autocorrelation. NeuroImage Soroosh Afyouni, Stephen M. Smith, Thomas E. Nichols
2019	J	`jnl`	Estimation of brain age delta from brain imaging. NeuroImage Stephen M. Smith, Diego Vidaurre, Fidel Alfaro-Almagro, Thomas E. Nichols, Karla L. Miller
2019	J	`jnl`	Optimising neonatal fMRI data analysis: Design and validation of an extended dHCP preprocessing pipeline to characterise noxious-evoked brain activity in infants. NeuroImage Luke Baxter, Sean P. Fitzgibbon, Fiona Moultrie, Sezgi Goksan, Mark Jenkinson, Stephen M. Smith, Jesper L. R. Andersson, Eugene P. Duff, Rebeccah Slater
2019	J	`jnl`	Probabilistic TFCE: A generalized combination of cluster size and voxel intensity to increase statistical power. NeuroImage Tamás Spisák, Zsófia Spisák, Matthias Zunhammer, Ulrike Bingel, Stephen M. Smith, Thomas E. Nichols, Zsigmond Tamás Kincses
2019	J	`jnl`	Towards algorithmic analytics for large-scale datasets. Nat. Mach. Intell. Danilo Bzdok, Thomas E. Nichols, Stephen M. Smith
2019	J	`jnl`	Using GPUs to accelerate computational diffusion MRI: From microstructure estimation to tractography and connectomes. NeuroImage Moisés Hernández-Fernández, István Zoltan Reguly, Saâd Jbabdi, Michael B. Giles, Stephen M. Smith, Stamatios N. Sotiropoulos
2018	—	`conf`	A Machine Learning Approach to Diffusion MRI Partial Volume Estimation. SASHIMI@MICCAI Emmanuel Vallée, Wenchuan Wu, Francesca Galassi, Saâd Jbabdi, Stephen M. Smith
2018	J	`jnl`	Directed functional connectivity using dynamic graphical models. NeuroImage Simon Schwab, Ruth Harbord, Valerio Zerbi, Lloyd T. Elliott, Soroosh Afyouni, Jim Q. Smith, Mark W. Woolrich, Stephen M. Smith, Thomas E. Nichols
2018	J	`jnl`	Disambiguating brain functional connectivity. NeuroImage Eugene P. Duff, Tamar R. Makin, Michiel Cottaar, Stephen M. Smith, Mark W. Woolrich
2018	J	`jnl`	Discovering dynamic brain networks from big data in rest and task. NeuroImage Diego Vidaurre, Romesh G. Abeysuriya, Robert Becker, Andrew J. Quinn, Fidel Alfaro-Almagro, Stephen M. Smith, Mark W. Woolrich
2018	J	`jnl`	Image processing and Quality Control for the first 10, 000 brain imaging datasets from UK Biobank. NeuroImage Fidel Alfaro-Almagro, Mark Jenkinson, Neal K. Bangerter, Jesper L. R. Andersson, Ludovica Griffanti, Gwenaëlle Douaud, Stamatios N. Sotiropoulos, Saâd Jbabdi, Moisés Hernández-Fernández, Emmanuel Vallée, Diego Vidaurre, Matthew A. Webster, Paul McCarthy, Christopher Rorden, Alessandro Daducci, Daniel C. Alexander, Hui Zhang, Iulius Dragonu, Paul M. Matthews, Karla L. Miller, Stephen M. Smith
2018	J	`jnl`	Multi-subject hierarchical inverse covariance modelling improves estimation of functional brain networks. NeuroImage Giles L. Colclough, Mark W. Woolrich, Samuel J. Harrison, Pedro A. Rojas-Lopez, Pedro A. Valdés-Sosa, Stephen M. Smith
2018	J	`jnl`	Multimodal surface matching with higher-order smoothness constraints. NeuroImage Emma C. Robinson, Kara Garcia, Matthew F. Glasser, Zhengdao Chen, Timothy S. Coalson, Antonios Makropoulos, Jelena Bozek, Robert Wright, Andreas Schuh, Matthew A. Webster, Jana Hutter, Anthony Price, Lucilio Cordero-Grande, Emer J. Hughes, Nora Tusor, Philip V. Bayly, David C. Van Essen, Stephen M. Smith, Daniel Rueckert
2018	J	`jnl`	The Lifespan Human Connectome Project in Development: A large-scale study of brain connectivity development in 5-21 year olds. NeuroImage Leah H. Somerville, Susan Y. Bookheimer, Randy L. Buckner, Gregory C. Burgess, Sandra W. Curtiss, Mirella Dapretto, Jennifer Stine Elam, Michael S. Gaffrey, Michael P. Harms, Cynthia Hodge, Sridhar Kandala, Erik K. Kastman, Thomas E. Nichols, Bradley L. Schlaggar, Stephen M. Smith, Kathleen M. Thomas, Essa Yacoub, David C. Van Essen, Deanna M. Barch
2018	J	`jnl`	Using temporal ICA to selectively remove global noise while preserving global signal in functional MRI data. NeuroImage Matthew F. Glasser, Timothy S. Coalson, Janine D. Bijsterbosch, Samuel J. Harrison, Michael P. Harms, Alan Anticevic, David C. Van Essen, Stephen M. Smith
2017	J	`jnl`	Distinct resting-state functional connections associated with episodic and visuospatial memory in older adults. NeuroImage Sana Suri, Anya Topiwala, Nicola Filippini, Eniko Zsoldos, Abda Mahmood, Claire E. Sexton, Archana Singh-Manoux, Mika Kivimäki, Clare E. Mackay, Stephen M. Smith, Klaus P. Ebmeier
2017	J	`jnl`	Hand classification of fMRI ICA noise components. NeuroImage Ludovica Griffanti, Gwenaëlle Douaud, Janine D. Bijsterbosch, Stefania Evangelisti, Fidel Alfaro-Almagro, Matthew F. Glasser, Eugene P. Duff, Sean P. Fitzgibbon, Robert Westphal, Davide Carone, Christian F. Beckmann, Stephen M. Smith
2017	J	`jnl`	Heterogeneous fractionation profiles of meta-analytic coactivation networks. NeuroImage Angela R. Laird, Michael C. Riedel, Mershack Okoe, Radu Jianu, Kimberly L. Ray, Simon B. Eickhoff, Stephen M. Smith, Peter T. Fox, Matthew T. Sutherland
2017	J	`jnl`	Investigations into within- and between-subject resting-state amplitude variations. NeuroImage Janine Bijsterbosch, Samuel J. Harrison, Eugene P. Duff, Fidel Alfaro-Almagro, Mark W. Woolrich, Stephen M. Smith
2017	J	`jnl`	Tradeoffs in pushing the spatial resolution of fMRI for the 7T Human Connectome Project. NeuroImage An T. Vu, Keith Jamison, Matthew F. Glasser, Stephen M. Smith, Timothy S. Coalson, Steen Moeller, Edward J. Auerbach, Kâmil Ugurbil, Essa Yacoub
2016	J	`jnl`	A multi-modal parcellation of human cerebral cortex. Nat. Matthew F. Glasser, Timothy S. Coalson, Emma C. Robinson, Carl D. Hacker, John W. Harwell, Essa Yacoub, Kâmil Ugurbil, Jesper L. R. Andersson, Christian F. Beckmann, Mark Jenkinson, Stephen M. Smith, David C. Van Essen
2016	J	`jnl`	Faster permutation inference in brain imaging. NeuroImage Anderson M. Winkler, Gerard R. Ridgway, Gwenaëlle Douaud, Thomas E. Nichols, Stephen M. Smith
2016	J	`jnl`	How reliable are MEG resting-state connectivity metrics? NeuroImage Giles L. Colclough, Mark W. Woolrich, Prejaas Tewarie, Matthew J. Brookes, Andrew J. Quinn, Stephen M. Smith
2016	J	`jnl`	The brain functional connectome is robustly altered by lack of sleep. NeuroImage Tobias Kaufmann, Torbjørn Elvsåshagen, Dag Alnæs, Nathalia Zak, Per Ø. Pedersen, Linn B. Norbom, Sophia H. Quraishi, Enzo Tagliazucchi, Helmut Laufs, Atle Bjørnerud, Ulrik F. Malt, Ole A. Andreassen, Evangelos Roussos, Eugene P. Duff, Stephen M. Smith, Inge R. Groote, Lars T. Westlye
2015	J	`jnl`	A symmetric multivariate leakage correction for MEG connectomes. NeuroImage Giles L. Colclough, Matthew J. Brookes, Stephen M. Smith, Mark W. Woolrich
2015	J	`jnl`	Attentional load modulates large-scale functional brain connectivity beyond the core attention networks. NeuroImage Dag Alnæs, Tobias Kaufmann, Geneviève Richard, Eugene P. Duff, Markus H. Sneve, Tor Endestad, Jan Egil Nordvik, Ole A. Andreassen, Stephen M. Smith, Lars T. Westlye
2015	J	`jnl`	Functional Connectivity under Anticipation of Shock: Correlates of Trait Anxious Affect versus Induced Anxiety. J. Cogn. Neurosci. Janine Bijsterbosch, Stephen M. Smith, Sonia J. Bishop
2015	J	`jnl`	Large-scale Probabilistic Functional Modes from resting state fMRI. NeuroImage Samuel J. Harrison, Mark W. Woolrich, Emma C. Robinson, Matthew F. Glasser, Christian F. Beckmann, Mark Jenkinson, Stephen M. Smith
2015	J	`jnl`	Multi-level block permutation. NeuroImage Anderson M. Winkler, Matthew A. Webster, Diego Vidaurre, Thomas E. Nichols, Stephen M. Smith
2014	J	`jnl`	Automatic denoising of functional MRI data: Combining independent component analysis and hierarchical fusion of classifiers. NeuroImage Gholamreza Salimi Khorshidi, Gwenaëlle Douaud, Christian F. Beckmann, Matthew F. Glasser, Ludovica Griffanti, Stephen M. Smith
2014	J	`jnl`	Group-PCA for very large fMRI datasets. NeuroImage Stephen M. Smith, Aapo Hyvärinen, Gaël Varoquaux, Karla L. Miller, Christian F. Beckmann
2014	J	`jnl`	ICA-based artefact removal and accelerated fMRI acquisition for improved resting state network imaging. NeuroImage Ludovica Griffanti, Gholamreza Salimi Khorshidi, Christian F. Beckmann, Edward J. Auerbach, Gwenaëlle Douaud, Claire E. Sexton, Eniko Zsoldos, Klaus P. Ebmeier, Nicola Filippini, Clare E. Mackay, Steen Moeller, Junqian Xu, Essa Yacoub, Giuseppe Baselli, Kâmil Ugurbil, Karla L. Miller, Stephen M. Smith
2014	J	`jnl`	MSM: A new flexible framework for Multimodal Surface Matching. NeuroImage Emma C. Robinson, Saâd Jbabdi, Matthew F. Glasser, Jesper L. R. Andersson, Gregory C. Burgess, Michael P. Harms, Stephen M. Smith, David C. Van Essen, Mark Jenkinson
2014	—	`conf`	MVPA to enhance the study of rare cognitive events: An investigation of experimental PTSD. PRNI Katherine E. Niehaus, Ian A. Clark, Corin Bourne, Clare E. Mackay, Emily A. Holmes, Stephen M. Smith, Mark William Woolrich, Eugene P. Duff
2014	J	`jnl`	Optimizing full-brain coverage in human brain MRI through population distributions of brain size. NeuroImage Maarten Mennes, Mark Jenkinson, Romain Valabrègue, Jan K. Buitelaar, Christian F. Beckmann, Stephen M. Smith
2014	J	`jnl`	Permutation inference for the general linear model. NeuroImage Anderson M. Winkler, Gerard R. Ridgway, Matthew A. Webster, Stephen M. Smith, Thomas E. Nichols
2014	J	`jnl`	Resting State Correlates of Subdimensions of Anxious Affect. J. Cogn. Neurosci. Janine Bijsterbosch, Stephen M. Smith, Sophie Forster, Oliver P. John, Sonia J. Bishop
2013	J	`jnl`	Evaluation of slice accelerations using multiband echo planar imaging at 3 T. NeuroImage Junqian Xu, Steen Moeller, Edward J. Auerbach, John P. Strupp, Stephen M. Smith, David A. Feinberg, Essa Yacoub, Kâmil Ugurbil
2013	J	`jnl`	Improving alignment in Tract-based spatial statistics: Evaluation and optimization of image registration. NeuroImage Marius de Groot, Meike W. Vernooij, Stefan Klein, Mohammad Arfan Ikram, Frans M. Vos, Stephen M. Smith, Wiro J. Niessen, Jesper L. R. Andersson
2013	—	`conf`	Multimodal Surface Matching: Fast and Generalisable Cortical Registration Using Discrete Optimisation. IPMI Emma C. Robinson, Saâd Jbabdi, Jesper L. R. Andersson, Stephen M. Smith, Matthew F. Glasser, David C. Van Essen, Gregory C. Burgess, Michael P. Harms, Deanna M. Barch, Mark Jenkinson
2013	J	`jnl`	Pairwise likelihood ratios for estimation of non-Gaussian structural equation models. J. Mach. Learn. Res. Aapo Hyvärinen, Stephen M. Smith
2013	J	`jnl`	Pushing spatial and temporal resolution for functional and diffusion MRI in the Human Connectome Project. NeuroImage Kâmil Ugurbil, Junqian Xu, Edward J. Auerbach, Steen Moeller, An T. Vu, Julio Martin Duarte-Carvajalino, Christophe Lenglet, Xiaoping Wu, Sebastian Schmitter, Pierre-François van de Moortele, John P. Strupp, Guillermo Sapiro, Federico De Martino, Dingxin Wang, Noam Harel, Michael Garwood, Liyong Chen, David A. Feinberg, Stephen M. Smith, Karla L. Miller, Stamatios N. Sotiropoulos, Saâd Jbabdi, Jesper L. R. Andersson, Timothy Edward John Behrens, Matthew F. Glasser, David C. Van Essen, Essa Yacoub
2013	J	`jnl`	Resting-state fMRI in the Human Connectome Project. NeuroImage Stephen M. Smith, Christian F. Beckmann, Jesper L. R. Andersson, Edward J. Auerbach, Janine D. Bijsterbosch, Gwenaëlle Douaud, Eugene P. Duff, David A. Feinberg, Ludovica Griffanti, Michael P. Harms, Michael Kelly, Timothy O. Laumann, Karla L. Miller, Steen Moeller, Steven E. Petersen, Jonathan D. Power, Gholamreza Salimi Khorshidi, Abraham Z. Snyder, An T. Vu, Mark William Woolrich, Junqian Xu, Essa Yacoub, Kâmil Ugurbil, David C. Van Essen, Matthew F. Glasser
2013	J	`jnl`	Spatially constrained hierarchical parcellation of the brain with resting-state fMRI. NeuroImage Thomas Blumensath, Saâd Jbabdi, Matthew F. Glasser, David C. Van Essen, Kâmil Ugurbil, Timothy Edward John Behrens, Stephen M. Smith
2013	J	`jnl`	The WU-Minn Human Connectome Project: An overview. NeuroImage David C. Van Essen, Stephen M. Smith, Deanna M. Barch, Timothy Edward John Behrens, Essa Yacoub, Kâmil Ugurbil
2013	—	`conf`	Utility of Partial Correlation for Characterising Brain Dynamics: MVPA-based Assessment of Regularisation and Network Selection. PRNI Eugene P. Duff, Tamar R. Makin, Sasidhar Madugula, Stephen M. Smith, Mark William Woolrich
2012	J	`jnl`	Benefits of multi-modal fusion analysis on a large-scale dataset: Life-span patterns of inter-subject variability in cortical morphometry and white matter microstructure. NeuroImage Adrian R. Groves, Stephen M. Smith, Anders M. Fjell, Christian K. Tamnes, Kristine B. Walhovd, Gwenaëlle Douaud, Mark William Woolrich, Lars T. Westlye
2012	J	`jnl`	FSL. NeuroImage Mark Jenkinson, Christian F. Beckmann, Timothy Edward John Behrens, Mark William Woolrich, Stephen M. Smith
2012	—	`conf`	Resting-State FMRI Single Subject Cortical Parcellation Based on Region Growing. MICCAI (2) Thomas Blumensath, Timothy Edward John Behrens, Stephen M. Smith
2012	J	`jnl`	Task-driven ICA feature generation for accurate and interpretable prediction using fMRI. NeuroImage Eugene P. Duff, Aaron J. Trachtenberg, Clare E. Mackay, Matthew Alexander Howard, Frederick Wilson, Stephen M. Smith, Mark William Woolrich
2012	J	`jnl`	The Human Connectome Project: A data acquisition perspective. NeuroImage David C. Van Essen, Kâmil Ugurbil, Edward J. Auerbach, Deanna M. Barch, T. E. J. Behrens, R. Bucholz, Acer Chang, Liyong Chen, Maurizio Corbetta, Sandra W. Curtiss, Stefania Della Penna, David A. Feinberg, Matthew F. Glasser, Noam Harel, A. C. Heath, Linda J. Larson-Prior, Daniel S. Marcus, Georgios Michalareas, Steen Moeller, Robert Oostenveld, Steven E. Petersen, Fred W. Prior, Bradley L. Schlaggar, Stephen M. Smith, Abraham Z. Snyder, Junqian Xu, Essa Yacoub
2012	J	`jnl`	The danger of systematic bias in group-level FMRI-lag-based causality estimation. NeuroImage Stephen M. Smith, Peter A. Bandettini, Karla L. Miller, T. E. J. Behrens, Karl J. Friston, Olivier David, Thomas T. Liu, Mark William Woolrich, Thomas E. Nichols
2012	J	`jnl`	The future of FMRI connectivity. NeuroImage Stephen M. Smith
2011	J	`jnl`	A Bayesian model of shape and appearance for subcortical brain segmentation. NeuroImage Brian Patenaude, Stephen M. Smith, David N. Kennedy, Mark Jenkinson
2011	J	`jnl`	Adjusting the effect of nonstationarity in cluster-based and TFCE inference. NeuroImage Gholamreza Salimi Khorshidi, Stephen M. Smith, Thomas E. Nichols
2011	J	`jnl`	Behavioral Interpretations of Intrinsic Connectivity Networks. J. Cogn. Neurosci. Angela R. Laird, P. Mickle Fox, Simon B. Eickhoff, Jessica A. Turner, Kimberly L. Ray, D. Reese McKay, David C. Glahn, Christian F. Beckmann, Stephen M. Smith, Peter T. Fox
2011	J	`jnl`	DTI measures in crossing-fibre areas: Increased diffusion anisotropy reveals early white matter alteration in MCI and mild Alzheimer's disease. NeuroImage Gwenaëlle Douaud, Saâd Jbabdi, Timothy Edward John Behrens, Ricarda A. Menke, Achim Gass, Andreas U. Monsch, Anil Rao, Brandon J. Whitcher, Gordon L. Kindlmann, Paul M. Matthews, Stephen M. Smith
2011	J	`jnl`	Diffusion imaging of whole, post-mortem human brains on a clinical MRI scanner. NeuroImage Karla L. Miller, Charlotte J. Stagg, Gwenaëlle Douaud, Saâd Jbabdi, Stephen M. Smith, Timothy Edward John Behrens, Mark Jenkinson, Steven A. Chance, Margaret M. Esiri, Natalie L. Voets, Ned Jenkinson, Tipu Z. Aziz, Martin R. Turner, Heidi Johansen-Berg, Jennifer A. McNab
2011	J	`jnl`	Network modelling methods for FMRI. NeuroImage Stephen M. Smith, Karla L. Miller, Gholamreza Salimi Khorshidi, Matthew A. Webster, Christian F. Beckmann, Thomas E. Nichols, Joseph D. Ramsey, Mark William Woolrich
2011	J	`jnl`	Using Gaussian-Process Regression for Meta-Analytic Neuroimaging Inference Based on Sparse Observations. IEEE Trans. Medical Imaging Gholamreza Salimi Khorshidi, Thomas E. Nichols, Stephen M. Smith, Mark William Woolrich
2010	J	`jnl`	Age-related changes in grey and white matter structure throughout adulthood. NeuroImage Antonio Giorgio, Luca Santelli, Valentina Tomassini, Rose Bosnell, Stephen M. Smith, Nicola De Stefano, Heidi Johansen-Berg
2010	J	`jnl`	Corrigendum to "An evaluation of four automatic methods of segmenting the subcortical structures in the brain" [NeuroImage 47 (2009) 1435-1447]. NeuroImage Kolawole Oluwole Babalola, Brian Patenaude, Paul Aljabar, Julia A. Schnabel, David N. Kennedy, William R. Crum, Stephen M. Smith, Timothy F. Cootes, Mark Jenkinson, Daniel Rueckert
2010	J	`jnl`	Crossing fibres in tract-based spatial statistics. NeuroImage Saâd Jbabdi, Timothy Edward John Behrens, Stephen M. Smith
2010	J	`jnl`	Genetics of microstructure of cerebral white matter using diffusion tensor imaging. NeuroImage Peter V. Kochunov, David C. Glahn, Jack L. Lancaster, Anderson M. Winkler, Stephen M. Smith, Paul M. Thompson, Laura Almasy, Ravindranath Duggirala, Peter T. Fox, John Blangero
2009	—	`conf`	Adjusting the Neuroimaging Statistical Inferences for Nonstationarity. MICCAI (1) Gholamreza Salimi Khorshidi, Stephen M. Smith, Thomas E. Nichols
2009	J	`jnl`	An evaluation of four automatic methods of segmenting the subcortical structures in the brain. NeuroImage Kolawole Oluwole Babalola, Brian Patenaude, Paul Aljabar, Julia A. Schnabel, David N. Kennedy, William R. Crum, Stephen M. Smith, Timothy F. Cootes, Mark Jenkinson, Daniel Rueckert
2009	J	`jnl`	Bayesian analysis of neuroimaging data in FSL. NeuroImage Mark William Woolrich, Saâd Jbabdi, Brian Patenaude, Michael A. Chappell, Salima Makni, Timothy Behrens, Christian F. Beckmann, Mark Jenkinson, Stephen M. Smith
2009	J	`jnl`	Meta-analysis of neuroimaging data: A comparison of image-based and coordinate-based pooling of studies. NeuroImage Gholamreza Salimi Khorshidi, Stephen M. Smith, John Keltner, Tor D. Wager, Thomas E. Nichols
2009	—	`conf`	Methods for Tractography-Driven Surface Registration of Brain Structures. MICCAI (1) Aleksandar Petrovic, Stephen M. Smith, Ricarda A. Menke, Mark Jenkinson
2009	J	`jnl`	Performance Evaluation of Ensemble Empirical Mode Decomposition. Adv. Data Sci. Adapt. Anal. Rami K. Niazy, Christian F. Beckmann, J. Michael Brady, Stephen M. Smith
2009	J	`jnl`	Sampling and Visualizing Creases with Scale-Space Particles. IEEE Trans. Vis. Comput. Graph. Gordon L. Kindlmann, Raúl San José Estépar, Stephen M. Smith, Carl-Fredrik Westin
2009	J	`jnl`	Threshold-free cluster enhancement: Addressing problems of smoothing, threshold dependence and localisation in cluster inference. NeuroImage Stephen M. Smith, Thomas E. Nichols
2008	—	`conf`	Comparison and Evaluation of Segmentation Techniques for Subcortical Structures in Brain MRI. MICCAI (1) Kolawole O. Babalola, Brian Patenaude, Paul Aljabar, Julia A. Schnabel, David N. Kennedy, William R. Crum, Stephen M. Smith, Timothy F. Cootes, Mark Jenkinson, Daniel Rueckert
2008	J	`jnl`	Enhanced brain extraction improves the accuracy of brain atrophy estimation. NeuroImage Marco Battaglini, Stephen M. Smith, Susanna Brogi, Nicola De Stefano
2008	J	`jnl`	Evidence for abnormalities of cortical development in adolescent-onset schizophrenia. NeuroImage Natalie L. Voets, Morgan G. Hough, Gwenaëlle Douaud, Paul M. Matthews, Anthony James, Louise Winmill, Paula Webster, Stephen M. Smith
2008	J	`jnl`	Reproducibility of fMRI in the clinical setting: Implications for trial designs. NeuroImage Rose Bosnell, C. Wegner, Zsigmond Tamás Kincses, T. Korteweg, Federica Agosta, Olga Ciccarelli, Nicola De Stefano, Achim Gass, Jochen G. Hirsch, Heidi Johansen-Berg, Ludwig Kappos, Frederik Barkhof, Laura Mancini, F. Manfredonia, Silvia Marino, David H. Miller, Xavier Montalban, Jackie Palace, Maria Assunta Rocca, Christian Enzinger, Stefan Ropele, Alex Rovira, Stephen M. Smith, Alan J. Thompson, John S. Thornton, Tarek A. Yousry, Brandon J. Whitcher, Massimo Filippi, Paul M. Matthews
2007	J	`jnl`	Discordant white matter N-acetylasparate and diffusion MRI measures suggest that chronic metabolic dysfunction contributes to axonal pathology in multiple sclerosis. NeuroImage S. Cader, Heidi Johansen-Berg, M. Wylezinska, Jackie Palace, Tim E. J. Behrens, Stephen M. Smith, Paul M. Matthews
2007	—	`conf`	Independent Component Analysis of Functional Magnetic Resonance Imaging Data Using Wavelet Dictionaries. ICA Robert Johnson, Jonathan Marchini, Stephen M. Smith, Christian F. Beckmann
2007	J	`jnl`	Longitudinal and cross-sectional analysis of atrophy in Alzheimer's disease: Cross-validation of BSI, SIENA and SIENAX. NeuroImage Stephen M. Smith, Anil Rao, Nicola De Stefano, Mark Jenkinson, Jonathan M. Schott, Paul M. Matthews, Nick C. Fox
2007	J	`jnl`	Meaningful design and contrast estimability in FMRI. NeuroImage Stephen M. Smith, Mark Jenkinson, Christian F. Beckmann, Karla L. Miller, Mark W. Woolrich
2007	J	`jnl`	Regional brain atrophy development is related to specific aspects of clinical dysfunction in multiple sclerosis. NeuroImage Bas Jasperse, Hugo Vrenken, Ernesto Sanz-Arigita, Vincent de Groot, Stephen M. Smith, Chris H. Polman, Frederik Barkhof
2007	J	`jnl`	Relationship between white matter fractional anisotropy and other indices of cerebral health in normal aging: Tract-based spatial statistics study of aging. NeuroImage Peter V. Kochunov, Paul M. Thompson, Jack L. Lancaster, George Bartzokis, Stephen M. Smith, Thomas R. Coyle, Donald Royall, Angela R. Laird, Peter T. Fox
2007	J	`jnl`	Signal and noise characteristics of SSFP FMRI: A comparison with GRE at multiple field strengths. NeuroImage Karla L. Miller, Stephen M. Smith, Peter Jezzard, Graham C. Wiggins, Christopher J. Wiggins
2006	—	`conf`	A Bayesian Cost Function Applied to Model-Based Registration of Sub-cortical Brain Structures. WBIR Brian Patenaude, Stephen M. Smith, Mark Jenkinson
2006	J	`jnl`	A consistent relationship between local white matter architecture and functional specialisation in medial frontal cortex. NeuroImage T. E. J. Behrens, Mark Jenkinson, Matthew D. Robson, Stephen M. Smith, Heidi Johansen-Berg
2006	J	`jnl`	Concurrent numerical simulation of flow and blood clotting using the lattice Boltzmann technique. Int. J. Bioinform. Res. Appl. Jörg Bernsdorf, Sarah E. Harrison, Stephen M. Smith, Patricia V. Lawford, D. Rodney Hose
2006	J	`jnl`	Tract-based spatial statistics: Voxelwise analysis of multi-subject diffusion data. NeuroImage Stephen M. Smith, Mark Jenkinson, Heidi Johansen-Berg, Daniel Rueckert, Thomas E. Nichols, Clare E. Mackay, Kate E. Watkins, Olga Ciccarelli, M. Zaheer Cader, Paul M. Matthews, Timothy Edward John Behrens
2006	J	`jnl`	fMRI resting state networks define distinct modes of long-distance interactions in the human brain. NeuroImage Marilena De Luca, Christian F. Beckmann, Nicola De Stefano, Paul M. Matthews, Stephen M. Smith
2005	B	`conf`	A comparison of the tissue classification and the segmentation propagation techniques in MRI brain image segmentation. Image Processing Jinsong Ren, Beatrix I. Sneller, Daniel Rueckert, Joseph V. Hajnal, Rolf A. Heckemann, Stephen M. Smith, John Vickers, Derek L. G. Hill
2005	—	`conf`	Concurrent Numerical Simulation of Flow and Blood Clotting using the Lattice Boltzmann Technique. ICPADS (2) Jörg Bernsdorf, Sarah E. Harrison, Stephen M. Smith, Patricia V. Lawford, D. Rodney Hose
2005	J	`jnl`	Mixture models with adaptive spatial regularization for segmentation with an application to FMRI data. IEEE Trans. Medical Imaging Mark William Woolrich, Timothy Edward John Behrens, Christian F. Beckmann, Stephen M. Smith
2005	J	`jnl`	Removal of FMRI environment artifacts from EEG data using optimal basis sets. NeuroImage Rami K. Niazy, Christian F. Beckmann, Gian Domenico Iannetti, J. Michael Brady, Stephen M. Smith
2005	J	`jnl`	Tensorial extensions of independent component analysis for multisubject FMRI analysis. NeuroImage Christian F. Beckmann, Stephen M. Smith
2004	—	`conf`	A Framework for Detailed Objective Comparison of Non-rigid Registration Algorithms in Neuroimaging. MICCAI (1) William R. Crum, Daniel Rueckert, Mark Jenkinson, David N. Kennedy, Stephen M. Smith
2004	J	`jnl`	Constrained linear basis sets for HRF modelling using Variational Bayes. NeuroImage Mark W. Woolrich, Timothy Edward John Behrens, Stephen M. Smith
2004	J	`jnl`	Fully Bayesian spatio-temporal modeling of FMRI data. IEEE Trans. Medical Imaging Mark William Woolrich, Mark Jenkinson, J. Michael Brady, Stephen M. Smith
2004	J	`jnl`	Multilevel linear modelling for FMRI group analysis using Bayesian inference. NeuroImage Mark W. Woolrich, Timothy Edward John Behrens, Christian F. Beckmann, Mark Jenkinson, Stephen M. Smith
2004	J	`jnl`	Probabilistic independent component analysis for functional magnetic resonance imaging. IEEE Trans. Medical Imaging Christian F. Beckmann, Stephen M. Smith
2003	Misc	`conf`	CT Reconstruction Using FBP with Sinusoidal Amendment for Metal Artefact Reduction. DICTA Julian J. Liu, Stephen R. Watt-Smith, Stephen M. Smith
2003	J	`jnl`	General multilevel linear modeling for group analysis in FMRI. NeuroImage Christian F. Beckmann, Mark Jenkinson, Stephen M. Smith
2003	J	`jnl`	On Bias in the Estimation of Autocorrelations for fMRI Voxel Time-Series Analysis. NeuroImage Jonathan Marchini, Stephen M. Smith
2002	—	`conf`	A Dynamic Brain Atlas. MICCAI (1) Derek L. G. Hill, Joseph V. Hajnal, Daniel Rueckert, Stephen M. Smith, Thomas Hartkens, Kate McLeish
2002	J	`jnl`	Accurate, Robust, and Automated Longitudinal and Cross-Sectional Brain Change Analysis. NeuroImage Stephen M. Smith, Yongyue Zhang, Mark Jenkinson, Jacqueline Chen, Paul M. Matthews, Antonio Federico, Nicola De Stefano
2002	J	`jnl`	Effects of Word Form on Brain Processing of Written Chinese. NeuroImage Shimin Fu, Yiping Chen, Stephen M. Smith, Susan Iversen, Paul M. Matthews
2002	J	`jnl`	Improved Optimization for the Robust and Accurate Linear Registration and Motion Correction of Brain Images. NeuroImage Mark Jenkinson, Peter R. Bannister, Michael Brady, Stephen M. Smith
2001	J	`jnl`	A global optimisation method for robust affine registration of brain images. Medical Image Anal. Mark Jenkinson, Stephen M. Smith
2001	J	`jnl`	Segmentation of Brain MR Images through a Hidden Markov Random Field Model and the Expectation Maximization Algorithm. IEEE Trans. Medical Imaging Yongyue Zhang, Michael Brady, Stephen M. Smith
2001	J	`jnl`	Temporal Autocorrelation in Univariate Linear Modeling of FMRI Data. NeuroImage Mark W. Woolrich, Brian D. Ripley, J. Michael Brady, Stephen M. Smith
2000	B	`conf`	Hidden Markov random field model for segmentation of brain MR image. Image Processing Yongyue Zhang, J. Michael Brady, Stephen M. Smith
1999	J	`jnl`	A Non-Rigid Registration Algorithm for Dynamic Breast MR Images. Artif. Intell. Paul M. Hayton, Michael Brady, Stephen M. Smith, Niall Moore
1999	A	`conf`	Accurate Robust Symmetry Estimation. MICCAI Stephen M. Smith, Mark Jenkinson
1998	J	`jnl`	ASSET-2: Real-Time Motion Segmentation and Object Tracking. Real Time Imaging Stephen M. Smith
1997	J	`jnl`	SUSAN - A New Approach to Low Level Image Processing. Int. J. Comput. Vis. Stephen M. Smith, J. Michael Brady
1996	B	`conf`	Integrated real-time motion segmentation and 3D interpretation. ICPR Stephen M. Smith
1995	A*	`conf`	ASSET-2: Real-Time Motion Segmentation and Shape Tracking. ICCV Stephen M. Smith
1995	J	`jnl`	ASSET-2: Real-Time Motion Segmentation and Shape Tracking. IEEE Trans. Pattern Anal. Mach. Intell. Stephen M. Smith, Michael Brady
1993	J	`jnl`	Note on small angle approximations for stereo disparity. Image Vis. Comput. Stephen M. Smith
1993	J	`jnl`	Planar region detection and motion recovery. Image Vis. Comput. David Sinclair, Andrew Blake, Stephen M. Smith, Charlie Rothwell
1992	A	`conf`	A New Class of Corner Finder. BMVC Stephen M. Smith
1992	A	`conf`	Planar Region Detection and Motion Recovery. BMVC David Sinclair, Andrew Blake, Stephen M. Smith, Charlie Rothwell