Stefania Bortoluzzi

16 papers Misc 1Journal 15
YearRankTypeTitle / Venue / Authors
2023 J jnl
Discovery of fusion circular RNAs in leukemia with
Briefings Bioinform.
Anna Dal Molin, Caterina Tretti Parenzan, Enrico Gaffo, Cristina Borin, Elena Boldrin, Lueder H. Meyer, Geertruij te Kronnie, Silvia Bresolin, Stefania Bortoluzzi
2023 J jnl
Systematic benchmarking of statistical methods to assess differential expression of circular RNAs.
Briefings Bioinform.
Alessia Buratin, Stefania Bortoluzzi, Enrico Gaffo
2022 J jnl
CRAFT: a bioinformatics software for custom prediction of circular RNA functions.
Briefings Bioinform.
Anna Dal Molin, Enrico Gaffo, Valeria Difilippo, Alessia Buratin, Caterina Tretti Parenzan, Silvia Bresolin, Stefania Bortoluzzi
2022 J jnl
Correction to: CRAFT a bioinformatics software for custom prediction of circular RNA functions.
Briefings Bioinform.
Anna Dal Molin, Enrico Gaffo, Valeria Difilippo, Alessia Buratin, Caterina Tretti Parenzan, Silvia Bresolin, Stefania Bortoluzzi
2022 J jnl
Sensitive, reliable and robust circRNA detection from RNA-seq with CirComPara2.
Briefings Bioinform.
Enrico Gaffo, Alessia Buratin, Anna Dal Molin, Stefania Bortoluzzi
2021 J jnl
iWhale: a computational pipeline based on Docker and SCons for detection and annotation of somatic variants in cancer WES data.
Briefings Bioinform.
Andrea Binatti, Silvia Bresolin, Stefania Bortoluzzi, Alessandro Coppe
2019 J jnl
A survey of software tools for microRNA discovery and characterization using RNA-seq.
Briefings Bioinform.
Michele Bortolomeazzi, Enrico Gaffo, Stefania Bortoluzzi
2012 J jnl
MAGIA
Nucleic Acids Res.
Andrea Bisognin, Gabriele Sales, Alessandro Coppe, Stefania Bortoluzzi, Chiara Romualdi
2010 Misc conf
Critical Analysis of Transcriptional and Post-Transcriptional Regulatory Networks in Multiple Myeloma.
Pacific Symposium on Biocomputing
Marta Biasiolo, Mattia Forcato, Lino Possamai, Francesco Ferrari, Luca Agnelli, Marta Lionetti, Katia Todoerti, Antonino Neri, Massimo Marchiori, Stefania Bortoluzzi, Silvio Bicciato
2010 J jnl
MAGIA, a web-based tool for miRNA and Genes Integrated Analysis.
Nucleic Acids Res.
Gabriele Sales, Alessandro Coppe, Andrea Bisognin, Marta Biasiolo, Stefania Bortoluzzi, Chiara Romualdi
2009 J jnl
A-MADMAN: Annotation-based microarray data meta-analysis tool.
BMC Bioinform.
Andrea Bisognin, Alessandro Coppe, Francesco Ferrari, Davide Risso, Chiara Romualdi, Silvio Bicciato, Stefania Bortoluzzi
2007 J jnl
Novel definition files for human GeneChips based on GeneAnnot.
BMC Bioinform.
Francesco Ferrari, Stefania Bortoluzzi, Alessandro Coppe, Alexandra Sirota, Marilyn Safran, Michael Shmoish, Sergio Ferrari, Doron Lancet, Gian Antonio Danieli, Silvio Bicciato
2006 J jnl
REEF: searching REgionally Enriched Features in genomes.
BMC Bioinform.
Alessandro Coppe, Gian Antonio Danieli, Stefania Bortoluzzi
2005 J jnl
A multistep bioinformatic approach detects putative regulatory elements in gene promoters.
BMC Bioinform.
Stefania Bortoluzzi, Alessandro Coppe, Andrea Bisognin, Cinzia Pizzi, Gian Antonio Danieli
2004 J jnl
Detection of chromosomal regions showing differential gene expression in human skeletal muscle and in alveolar rhabdomyosarcoma.
BMC Bioinform.
Andrea Bisognin, Stefania Bortoluzzi, Gian Antonio Danieli
2001 J jnl
Differential expression of genes coding for ribosomal proteins in different human tissues.
Bioinform.
Stefania Bortoluzzi, Fabio d'Alessi, Chiara Romualdi, Gian Antonio Danieli