| 2026 |
A* |
conf |
AAAI
Kazi Ashik Islam, Zakaria Mehrab, Mahantesh M. Halappanavar, Henning S. Mortveit, Sridhar Katragadda, Jon Derek Loftis, Stefan Hoops, Madhav V. Marathe
|
| 2025 |
A |
conf |
IPDPS
Joy Kitson, Ian J. Costello, Jiangzhuo Chen, Diego Jiménez, Stefan Hoops, Henning S. Mortveit, Esteban Meneses, Jae-Seung Yeom, Madhav V. Marathe, Abhinav Bhatele
|
| 2024 |
J |
jnl |
CoRR
Joy Kitson, Ian J. Costello, Jiangzhuo Chen, Diego Jiménez, Stefan Hoops, Henning S. Mortveit, Esteban Meneses, Jae-Seung Yeom, Madhav V. Marathe, Abhinav Bhatele
|
| 2024 |
J |
jnl |
J. Parallel Distributed Comput.
Parantapa Bhattacharya, Dustin Machi, Jiangzhuo Chen, Stefan Hoops, Bryan Lewis, Henning S. Mortveit, Srinivasan Venkatramanan, Mandy L. Wilson, Achla Marathe, Przemyslaw J. Porebski, Brian Klahn, Joseph Outten, Anil Vullikanti, Dawen Xie, Abhijin Adiga, Shawn Brown, Christopher L. Barrett, Madhav V. Marathe
|
| 2023 |
C |
conf |
MABS
Sami Saliba, Faraz Dadgostari, Stefan Hoops, Henning S. Mortveit, Samarth Swarup
|
| 2023 |
J |
jnl |
Comput. Environ. Urban Syst.
Anna E. Brower, Balaji Ramesh, Kazi Ashik Islam, Henning S. Mortveit, Stefan Hoops, Anil Vullikanti, Madhav V. Marathe, Benjamin F. Zaitchik, Julia M. Gohlke, Samarth Swarup
|
| 2023 |
J |
jnl |
Int. J. High Perform. Comput. Appl.
Parantapa Bhattacharya, Jiangzhuo Chen, Stefan Hoops, Dustin Machi, Bryan L. Lewis, Srinivasan Venkatramanan, Mandy L. Wilson, Brian Klahn, Aniruddha Adiga, Benjamin Hurt, Joseph Outten, Abhijin Adiga, Andrew S. Warren, Young Yun Baek, Przemyslaw J. Porebski, Achla Marathe, Dawen Xie, Samarth Swarup, Anil Vullikanti, Henning S. Mortveit, Stephen G. Eubank, Christopher L. Barrett, Madhav Vinayak Marathe
|
| 2023 |
— |
conf |
TPS-ISA
Galen Harrison, Przemyslaw J. Porebski, Jiangzhuo Chen, Mandy L. Wilson, Henning S. Mortveit, Parantapa Bhattacharya, Dawen Xie, Stefan Hoops, Anil Vullikanti, Li Xiong, James Joshi, Madhav V. Marathe
|
| 2022 |
J |
jnl |
CoRR
Bilal Shaikh, Lucian P. Smith, Dan Vasilescu, Gnaneswara Marupilla, Michael Wilson, Eran Agmon, Henry Agnew, Steven S. Andrews, Azraf Anwar, Moritz E. Beber, Frank T. Bergmann, David Brooks, Lutz Brusch, Laurence Calzone, Kiri Choi, Joshua Cooper, John Detloff, Brian Drawert, Michel Dumontier, G. Bard Ermentrout, James R. Faeder, Andrew P. Freiburger, Fabian Fröhlich, Akira Funahashi, Alan Garny, John H. Gennari, Padraig Gleeson, Anne Goelzer, Zachary B. Haiman, Joseph L. Hellerstein, Stefan Hoops, Jon C. Ison, Diego Jahn, Henry V. Jakubowski, Ryann Jordan, Matús Kalas, Matthias König, Wolfram Liebermeister, Synchon Mandal, Robert A. McDougal, J. Kyle Medley, Pedro Mendes, Robert Müller, Chris J. Myers, Aurélien Naldi, Tung V. N. Nguyen, David P. Nickerson, Brett G. Olivier, Drashti Patoliya, Loïc Paulevé, Linda R. Petzold, Ankita Priya, Anand K. Rampadarath, Johann M. Rohwer, Ali Sinan Saglam, Dilawar Singh, Ankur Sinha, Jacky L. Snoep, Hugh Sorby, Ryan K. Spangler, Jörn Starruß, Payton J. Thomas, David D. van Niekerk, Daniel Weindl, Fengkai Zhang, Anna Zhukova, Arthur P. Goldberg, Michael L. Blinov, Herbert M. Sauro, Ion I. Moraru, Jonathan R. Karr
|
| 2022 |
J |
jnl |
Nucleic Acids Res.
Bilal Shaikh, Lucian P. Smith, Dan Vasilescu, Gnaneswara Marupilla, Michael Wilson, Eran Agmon, Henry Agnew, Steven S. Andrews, Azraf Anwar, Moritz E. Beber, Frank T. Bergmann, David Brooks, Lutz Brusch, Laurence Calzone, Kiri Choi, Joshua Cooper, John Detloff, Brian Drawert, Michel Dumontier, G. Bard Ermentrout, James R. Faeder, Andrew P. Freiburger, Fabian Fröhlich, Akira Funahashi, Alan Garny, John H. Gennari, Padraig Gleeson, Anne Goelzer, Zachary B. Haiman, Jan Hasenauer, Joseph L. Hellerstein, Henning Hermjakob, Stefan Hoops, Jon C. Ison, Diego Jahn, Henry V. Jakubowski, Ryann Jordan, Matús Kalas, Matthias König, Wolfram Liebermeister, Rahuman S. Malik-Sheriff, Synchon Mandal, Robert A. McDougal, J. Kyle Medley, Pedro Mendes, Robert Müller, Chris J. Myers, Aurélien Naldi, Tung V. N. Nguyen, David P. Nickerson, Brett G. Olivier, Drashti Patoliya, Loïc Paulevé, Linda R. Petzold, Ankita Priya, Anand K. Rampadarath, Johann M. Rohwer, Ali Sinan Saglam, Dilawar Singh, Ankur Sinha, Jacky L. Snoep, Hugh Sorby, Ryan K. Spangler, Jörn Starruß, Payton J. Thomas, David D. van Niekerk, Daniel Weindl, Fengkai Zhang, Anna Zhukova, Arthur P. Goldberg, James C. Schaff, Michael L. Blinov, Herbert M. Sauro, Ion I. Moraru, Jonathan R. Karr
|
| 2022 |
A* |
conf |
KDD
Jiangzhuo Chen, Stefan Hoops, Achla Marathe, Henning S. Mortveit, Bryan L. Lewis, Srinivasan Venkatramanan, Arash Haddadan, Parantapa Bhattacharya, Abhijin Adiga, Anil Vullikanti, Aravind Srinivasan, Mandy L. Wilson, Gal Ehrlich, Maier Fenster, Stephen G. Eubank, Christopher L. Barrett, Madhav V. Marathe
|
| 2021 |
— |
conf |
IEEE BigData
Parantapa Bhattacharya, Dustin Machi, Jiangzhuo Chen, Stefan Hoops, Bryan L. Lewis, Henning S. Mortveit, Srinivasan Venkatramanan, Mandy L. Wilson, Achla Marathe, Przemyslaw J. Porebski, Brian Klahn, Joseph Outten, Anil Vullikanti, Dawen Xie, Abhijin Adiga, Shawn Brown, Christopher L. Barrett, Madhav V. Marathe
|
| 2021 |
J |
jnl |
Briefings Bioinform.
Franziska Hufsky, Kevin Lamkiewicz, Alexandre Almeida, Abdel Aouacheria, Cecilia N. Arighi, Alex Bateman, Jan Baumbach, Niko Beerenwinkel, Christian Brandt, Marco Cacciabue, Sara Chuguransky, Oliver Drechsel, Robert D. Finn, Adrian Fritz, Stephan Fuchs, Georges Hattab, Anne-Christin Hauschild, Dominik Heider, Marie Hoffmann, Martin Hölzer, Stefan Hoops, Lars Kaderali, Ioanna Kalvari, Max von Kleist, Renó Kmiecinski, Denise Kühnert, Gorka Lasso, Pieter Libin, Markus List, Hannah F. Löchel, Maria Jesus Martin, Roman Martin, Julian O. Matschinske, Alice C. McHardy, Pedro Mendes, Jaina Mistry, Vincent Navratil, Eric P. Nawrocki, Áine Niamh O'toole, Nancy Ontiveros-Palacios, Anton I. Petrov, Guillermo Rangel-Pineros, Nicole Redaschi, Susanne Reimering, Knut Reinert, Alejandro Reyes, Lorna J. Richardson, David L. Robertson, Sepideh Sadegh, Joshua B. Singer, Kristof Theys, Chris Upton, Marius Welzel, Lowri Williams, Manja Marz
|
| 2021 |
Misc |
conf |
WSC
Stefan Hoops, Jiangzhuo Chen, Abhijin Adiga, Bryan L. Lewis, Henning S. Mortveit, Hannah Baek, Mandy L. Wilson, Dawen Xie, Samarth Swarup, Srinivasan Venkatramanan, Justin Crow, Elena Diskin, Seth Levine, Helen Tazelaar, Brooke Rossheim, Chris Ghaemmaghami, Rebecca Early, Chris Barrett, Madhav V. Marathe, Carter Price
|
| 2021 |
A |
conf |
IPDPS
Dustin Machi, Parantapa Bhattacharya, Stefan Hoops, Jiangzhuo Chen, Henning S. Mortveit, Srinivasan Venkatramanan, Bryan L. Lewis, Mandy L. Wilson, Arindam Fadikar, Tom Maiden, Christopher L. Barrett, Madhav V. Marathe
|
| 2019 |
J |
jnl |
BMC Bioinform.
S. Ha, Elena S. Dimitrova, Stefan Hoops, Doaa Altarawy, Mitra Ansariola, D. Deb, Jane Glazebrook, R. Hillmer, Hossameldin Shahin, Fumiaki Katagiri, John McDowell, Molly Megraw, João C. Setubal, B. M. Tyler, Reinhard C. Laubenbacher
|
| 2019 |
J |
jnl |
J. Integr. Bioinform.
Michael Hucka, Frank T. Bergmann, Claudine Chaouiya, Andreas Dräger, Stefan Hoops, Sarah M. Keating, Matthias König, Nicolas Le Novère, Chris J. Myers, Brett G. Olivier, Sven Sahle, James C. Schaff, Rahuman S. Malik-Sheriff, Lucian P. Smith, Dagmar Waltemath, Darren J. Wilkinson, Fengkai Zhang
|
| 2018 |
J |
jnl |
Simul.
Thomas C. Jones Jr, Stefan Hoops, Layne T. Watson, Alida Palmisano, John J. Tyson, Clifford A. Shaffer
|
| 2018 |
J |
jnl |
J. Integr. Bioinform.
Michael Hucka, Frank T. Bergmann, Andreas Dräger, Stefan Hoops, Sarah M. Keating, Nicolas Le Novère, Chris J. Myers, Brett G. Olivier, Sven Sahle, James C. Schaff, Lucian P. Smith, Dagmar Waltemath, Darren J. Wilkinson
|
| 2018 |
J |
jnl |
J. Integr. Bioinform.
Michael Hucka, Frank T. Bergmann, Andreas Dräger, Stefan Hoops, Sarah M. Keating, Nicolas Le Novère, Chris J. Myers, Brett G. Olivier, Sven Sahle, James C. Schaff, Lucian P. Smith, Dagmar Waltemath, Darren J. Wilkinson
|
| 2015 |
J |
jnl |
IEEE ACM Trans. Comput. Biol. Bioinform.
Yongguo Mei, Adria Carbo, Stefan Hoops, Raquel Hontecillas, Josep Bassaganya-Riera
|
| 2015 |
— |
conf |
BIBM
Vida Abedi, Raquel Hontecillas, Stefan Hoops, Nathan Liles, Adria Carbo, Pinyi Lu, Casandra W. Philipson, Josep Bassaganya-Riera
|
| 2015 |
J |
jnl |
BMC Syst. Biol.
Alida Palmisano, Stefan Hoops, Layne T. Watson, Thomas C. Jones Jr, John J. Tyson, Clifford A. Shaffer
|
| 2015 |
J |
jnl |
BMC Bioinform.
Yongguo Mei, Vida Abedi, Adria Carbo, Xiaoying Zhang, Pinyi Lu, Casandra W. Philipson, Raquel Hontecillas, Stefan Hoops, Nathan Liles, Josep Bassaganya-Riera
|
| 2015 |
J |
jnl |
J. Integr. Bioinform.
Lucian Paul Smith, Michael Hucka, Stefan Hoops, Andrew Finney, Martin Ginkel, Chris J. Myers, Ion I. Moraru, Wolfram Liebermeister
|
| 2015 |
J |
jnl |
BioData Min.
Pinyi Lu, Vida Abedi, Yongguo Mei, Raquel Hontecillas, Stefan Hoops, Adria Carbo, Josep Bassaganya-Riera
|
| 2015 |
J |
jnl |
J. Integr. Bioinform.
Michael Hucka, Frank T. Bergmann, Andreas Dräger, Stefan Hoops, Sarah M. Keating, Nicolas Le Novère, Chris J. Myers, Brett G. Olivier, Sven Sahle, James C. Schaff, Lucian P. Smith, Dagmar Waltemath, Darren J. Wilkinson
|
| 2015 |
J |
jnl |
J. Integr. Bioinform.
Michael Hucka, Frank T. Bergmann, Stefan Hoops, Sarah M. Keating, Sven Sahle, James C. Schaff, Lucian P. Smith, Darren J. Wilkinson
|
| 2014 |
— |
conf |
BIBM
Yongguo Mei, Adria Carbo, Raquel Hontecillas, Stefan Hoops, Nathan Liles, Pinyi Lu, Casandra W. Philipson, Josep Bassaganya-Riera
|
| 2014 |
J |
jnl |
BMC Syst. Biol.
Alida Palmisano, Stefan Hoops, Layne T. Watson, Thomas C. Jones Jr, John J. Tyson, Clifford A. Shaffer
|
| 2013 |
J |
jnl |
PLoS Comput. Biol.
Adria Carbo, Raquel Hontecillas, Barbara Kronsteiner, Monica Viladomiu, Mireia Pedragosa, Pinyi Lu, Casandra W. Philipson, Stefan Hoops, Madhav V. Marathe, Stephen G. Eubank, Keith R. Bisset, Katherine V. Wendelsdorf, Abdul Salam Jarrah, Yongguo Mei, Josep Bassaganya-Riera
|
| 2012 |
J |
jnl |
BMC Syst. Biol.
Edward Kent, Stefan Hoops, Pedro Mendes
|
| 2012 |
— |
conf |
BIBM
Yongguo Mei, Raquel Hontecillas, Xiaoying Zhang, Keith R. Bisset, Stephen G. Eubank, Stefan Hoops, Madhav V. Marathe, Josep Bassaganya-Riera
|
| 2012 |
A |
conf |
IPDPS
Keith R. Bisset, Md. Maksudul Alam, Josep Bassaganya-Riera, Adria Carbo, Stephen G. Eubank, Raquel Hontecillas, Stefan Hoops, Yongguo Mei, Katherine V. Wendelsdorf, Dawen Xie, Jae-Seung Yeom, Madhav V. Marathe
|
| 2011 |
J |
jnl |
PLoS Comput. Biol.
Dagmar Waltemath, Richard R. Adams, Daniel A. Beard, Frank T. Bergmann, Upinder S. Bhalla, Randall Britten, Vijayalakshmi Chelliah, Mike T. Cooling, Jonathan Cooper, Edmund J. Crampin, Alan Garny, Stefan Hoops, Michael Hucka, Peter J. Hunter, Edda Klipp, Camille Laibe, Andrew K. Miller, Ion I. Moraru, David P. Nickerson, Poul M. F. Nielsen, Macha Nikolski, Sven Sahle, Herbert M. Sauro, Henning Schmidt, Jacky L. Snoep, Dominic P. Tolle, Olaf Wolkenhauer, Nicolas Le Novère
|
| 2006 |
J |
jnl |
Bioinform.
Stefan Hoops, Sven Sahle, Ralph Gauges, Christine Lee, Jürgen Pahle, Natalia Simus, Mudita Singhal, Liang Xu, Pedro Mendes, Ursula Kummer
|
| 2006 |
Misc |
conf |
WSC
Sven Sahle, Ralph Gauges, Jürgen Pahle, Natalia Simus, Ursula Kummer, Stefan Hoops, Christine Lee, Mudita Singhal, Liang Xu, Pedro Mendes
|