Stanislaw Oldziej

15 papers B 1C 1Journal 12Unranked 1
YearRankTypeTitle / Venue / Authors
2018 J jnl
Correction to Maximum Likelihood Calibration of the UNRES Force Field for Simulation of Protein Structure and Dynamics.
J. Chem. Inf. Model.
Pawel Krupa, Anna Halabis, Wioletta Zmudzinska, Stanislaw Oldziej, Harold A. Scheraga, Adam Liwo
2017 J jnl
Maximum Likelihood Calibration of the UNRES Force Field for Simulation of Protein Structure and Dynamics.
J. Chem. Inf. Model.
Pawel Krupa, Anna Halabis, Wioletta Zmudzinska, Stanislaw Oldziej, Harold A. Scheraga, Adam Liwo
2015 J jnl
A Maximum-Likelihood Approach to Force-Field Calibration.
J. Chem. Inf. Model.
Bartlomiej Zaborowski, Dawid Jagiela, Cezary Czaplewski, Anna Halabis, Agnieszka Lewandowska, Wioletta Zmudzinska, Stanislaw Oldziej, Agnieszka S. Karczynska, Christian Omieczynski, Tomasz K. Wirecki, Adam Liwo
2010 C conf
Towards Temperature Dependent Coarse-grained Potential of Side-chain Interactions for Protein Folding Simulations.
BIBE
Stanislaw Oldziej, Cezary Czaplewski, Adam Liwo, Harold A. Scheraga
2006 J jnl
A Hierarchical Multiscale Approach to Protein Structure Prediction: Production of Low-Resolution Packing Arrangements of Helices and Refinement of the Best Models with a United-Residue Force Field.
Multiscale Model. Simul.
Maurizio Chinchio, Cezary Czaplewski, Stanislaw Oldziej, Harold A. Scheraga
2006 — conf
Meta-computations on the CLUSTERIX Grid.
PARA
Roman Wyrzykowski, Norbert Meyer, Tomasz Olas, Lukasz Kuczynski, Bogdan Ludwiczak, Cezary Czaplewski, Stanislaw Oldziej
2005 J jnl
Protein structure prediction with the UNRES force-field using Replica-Exchange Monte Carlo-with-Minimization; Comparison with MCM, CSA, and CFMC.
J. Comput. Chem.
Marian Nanias, Maurizio Chinchio, Stanislaw Oldziej, Cezary Czaplewski, Harold A. Scheraga
2002 J jnl
Ab initio study of the mechanism of singlet-dioxygen addition to hydroxyaromatic compounds: Negative evidence for the involvement of peroxa and endoperoxide intermediates.
J. Comput. Chem.
Maciej Bobrowski, Adam Liwo, Stanislaw Oldziej, Danuta Jeziorek, Tadeusz Ossowski
2000 J jnl
Molecular Modeling of the Catalytic Domain of Serine/threonine Phosphatase-1with the Zn2+ and Mn2+ Di-nuclear Ion Centers in the Active Site.
Comput. Chem.
Edyta Wozniak, Stanislaw Oldziej, Jerzy Ciarkowski
2000 B conf
UNRES: a united-residue force field for energy-based prediction of protein structure - orgin and significance of multibody terms.
RECOMB
Adam Liwo, Jaroslaw Pillardy, Cezary Czaplewski, Jooyoung Lee, Daniel R. Ripoll, Malgorzata Groth, Sylwia Rodziewicz-Motowidlo, Rajmund Kazmierkiewicz, Ryszard J. Wawak, Stanislaw Oldziej, Harold A. Scheraga
1998 J jnl
United-residue force field for off-lattice protein-structure simulations: III. Origin of backbone hydrogen-bonding cooperativity in united-residue potentials.
J. Comput. Chem.
Adam Liwo, Rajmund Kazmierkiewicz, Cezary Czaplewski, Malgorzata Groth, Stanislaw Oldziej, Ryszard J. Wawak, Shelly Rackovsky, Matthew R. Pincus, Harold A. Scheraga
1997 J jnl
A New Approach to the Resolution of the Excitation-emission Spectra of Multicomponent Systems.
Comput. Chem.
Adam Liwo, Piotr Skurski, Stanislaw Oldziej, Leszek Lankiewicz, Joanna Malicka, Wieslaw Wiczk
1997 J jnl
A united-residue force field for off-lattice protein-structure simulations. I. Functional forms and parameters of long-range side-chain interaction potentials from protein crystal data.
J. Comput. Chem.
Adam Liwo, Stanislaw Oldziej, Matthew R. Pincus, Ryszard J. Wawak, Shelly Rackovsky, Harold A. Scheraga
1997 J jnl
A united-residue force field for off-lattice protein-structure simulations. II. Parameterization of short-range interactions and determination of weights of energy terms by Z-score optimization.
J. Comput. Chem.
Adam Liwo, Matthew R. Pincus, Ryszard J. Wawak, Shelly Rackovsky, Stanislaw Oldziej, Harold A. Scheraga
1996 J jnl
Mechanism of action of aspartic proteinases: Application of transition-state analogue theory.
J. Comput. Aided Mol. Des.
Stanislaw Oldziej, Jerzy Ciarkowski