Sonika Tyagi

16 papers Journal 15Unranked 1
YearRankTypeTitle / Venue / Authors
2026 J jnl
A comparative evaluation of handling missing data points and modalities in electronic health records.
Int. J. Medical Informatics
Aashish Bhandari, Sonika Tyagi
2025 J jnl
EHR-ML: A data-driven framework for designing machine learning applications with electronic health records.
Int. J. Medical Informatics
Yashpal Ramakrishnaiah, Nenad Macesic, Geoffrey I. Webb, Anton Y. Peleg, Sonika Tyagi
2025 J jnl
Refined Causal Graph Structure Learning via Curvature for Brain Disease Classification.
CoRR
Falih Gozi Febrinanto, Adonia Simango, Chengpei Xu, Jingjing Zhou, Jiangang Ma, Sonika Tyagi, Feng Xia
2025 J jnl
Refined causal graph structure learning via curvature for brain disease classification.
Artif. Intell. Rev.
Falih Gozi Febrinanto, Adonia Simango, Chengpei Xu, Jingjing Zhou, Jiangang Ma, Sonika Tyagi, Feng Xia
2025 — conf
Semantic Encoding in Medical LLMs for Vocabulary Standardisation.
HIKM
Samuel Thomas Mainwood, Aashish Bhandari, Sonika Tyagi
2024 J jnl
Uncovering co-regulatory modules and gene regulatory networks in the heart through machine learning-based analysis of large-scale epigenomic data.
Comput. Biol. Medicine
Naima Vahab, Tarun Bonu, Levin Kuhlmann, Mirana Ramialison, Sonika Tyagi
2023 J jnl
EHR-QC: A streamlined pipeline for automated electronic health records standardisation and preprocessing to predict clinical outcomes.
J. Biomed. Informatics
Yashpal Ramakrishnaiah, Nenad Macesic, Geoffrey I. Webb, Anton Y. Peleg, Sonika Tyagi
2021 J jnl
A multi-modal data harmonisation approach for discovery of COVID-19 drug targets.
Briefings Bioinform.
Tyrone Chen, Melcy Philip, Kim-Anh Lê Cao, Sonika Tyagi
2021 J jnl
multiomics: A user-friendly multi-omics data harmonisation R pipeline.
F1000Research
Tyrone Chen, Al J. Abadi, Kim-Anh Lê Cao, Sonika Tyagi
2020 J jnl
Towards a comprehensive pipeline to identify and functionally annotate long noncoding RNA (lncRNA).
Comput. Biol. Medicine
Yashpal Ramakrishnaiah, Levin Kuhlmann, Sonika Tyagi
2019 J jnl
Advancing the international data science workforce through shared training and education.
F1000Research
John D. Van Horn, Sumiko Abe, José Luis Ambite, Teresa K. Attwood, Niall Beard, Louisa Bellis, Avnish Bhattrai, Alex A. T. Bui, Gully Burns, Lily Fierro, Jonathan Gordon, Jeffrey S. Grethe, Jeana Kamdar, Xiaoyu Lei, Kristina Lerman, Annette McGrath, Nicola J. Mulder, Caroline O'Driscoll, Crystal Stewart, Sonika Tyagi
2019 J jnl
Establishing a distributed national research infrastructure providing bioinformatics support to life science researchers in Australia.
Briefings Bioinform.
Maria Victoria Schneider, Philippa C. Griffin, Sonika Tyagi, Madison Flannery, Saravanan Dayalan, Simon Gladman, Nathan S. Watson-Haigh, Philipp E. Bayer, Michael A. Charleston, Ira Cooke, Rob Cook, Richard J. Edwards, David Edwards, Dominique Gorse, Malcolm J. McConville, David Powell, Marc R. Wilkins, Andrew Lonie
2017 J jnl
Best practice data life cycle approaches for the life sciences.
F1000Research
Philippa C. Griffin, Jyoti Khadake, Kate S. LeMay, Suzanna E. Lewis, Sandra E. Orchard, Andrew Pask, Bernard J. Pope, Ute Roessner, Keith Russell, Torsten Seemann, Andrew E. Treloar, Sonika Tyagi, Jeffrey H. Christiansen, Saravanan Dayalan, Simon Gladman, Sandra B. Hangartner, Helen L. Hayden, William W. H. Ho, Gabriel Keeble-Gagnère, Pasi K. Korhonen, Peter Neish, Priscilla R. Prestes, Mark F. Richardson, Nathan S. Watson-Haigh, Kelly L. Wyres, Neil D. Young, Maria Victoria Schneider
2017 J jnl
Four simple recommendations to encourage best practices in research software.
F1000Research
Rafael C. Jiménez, Mateusz Kuzak, Monther Alhamdoosh, Michelle Barker, Bérénice Batut, Mikael Borg, Salvador Capella-Gutiérrez, Neil P. Chue Hong, Martin Cook, Manuel Corpas, Madison Flannery, Leyla J. García, Josep Lluís Gelpí, Simon L. Gladman, Carole A. Goble, Montserrat González Ferreiro, Alejandra N. González-Beltrán, Philippa C. Griffin, Björn A. Grüning, Jonas Hagberg, Petr Holub, Rob W. W. Hooft, Jon C. Ison, Daniel S. Katz, Brane Leskosek, Federico López-Gómez, Luis J. Oliveira, David Mellor, Rowland Mosbergen, Nicola J. Mulder, Yasset Pérez-Riverol, Robert Pergl, Horst Pichler, Bernard J. Pope, Ferran Sanz, Maria Victoria Schneider, Victoria Stodden, Radoslaw Suchecki, Radka Svobodová Vareková, Harry-Anton Talvik, Ilian T. Todorov, Andrew E. Treloar, Sonika Tyagi, Maarten van Gompel, Daniel Vaughan, Allegra Via, Xiaochuan Wang, Nathan S. Watson-Haigh, Steve Crouch
2017 J jnl
Towards an open, collaborative, reusable framework for sharing hands-on bioinformatics training workshops.
Briefings Bioinform.
Nathan S. Watson-Haigh, Jerico Nico De Leon Revote, Radoslaw Suchecki, Sonika Tyagi, Susan M. Corley, Catherine A. Shang, Annette McGrath
2013 J jnl
Next-generation sequencing: a challenge to meet the increasing demand for training workshops in Australia.
Briefings Bioinform.
Nathan S. Watson-Haigh, Catherine A. Shang, Matthias Haimel, Myrto Kostadima, Remco Loos, Nandan Deshpande, Konsta Duesing, Xi Li, Annette McGrath, Sean McWilliam, Simon Michnowicz, Paula Moolhuijzen, Steve Quenette, Jerico Nico De Leon Revote, Sonika Tyagi, Maria Victoria Schneider