Sofie Van Landeghem

18 papers Journal 10Unranked 8
YearRankTypeTitle / Venue / Authors
2022 J jnl
Multi hash embeddings in spaCy.
CoRR
Lester James V. Miranda, Ákos Kádár, Adriane Boyd, Sofie Van Landeghem, Anders Søgaard, Matthew Honnibal
2016 J jnl
Cell line name recognition in support of the identification of synthetic lethality in cancer from text.
Bioinform.
Suwisa Kaewphan, Sofie Van Landeghem, Tomoko Ohta, Yves Van de Peer, Filip Ginter, Sampo Pyysalo
2016 J jnl
Diffany: an ontology-driven framework to infer, visualise and analyse differential molecular networks.
BMC Bioinform.
Sofie Van Landeghem, Thomas Van Parys, Marieke Dubois, Dirk Inzé, Yves Van de Peer
2015 J jnl
Application of the EVEX resource to event extraction and network construction: Shared Task entry and result analysis.
BMC Bioinform.
Kai Hakala, Sofie Van Landeghem, Tapio Salakoski, Yves Van de Peer, Filip Ginter
2013 — conf
EVEX in ST'13: Application of a large-scale text mining resource to event extraction and network construction.
BioNLP@ACL (Shared Task)
Kai Hakala, Sofie Van Landeghem, Tapio Salakoski, Yves Van de Peer, Filip Ginter
2013 — conf
Evaluating Large-scale Text Mining Applications Beyond the Traditional Numeric Performance Measures.
BioNLP@ACL
Sofie Van Landeghem, Suwisa Kaewphan, Filip Ginter, Yves Van de Peer
2012 J jnl
Exploring Biomolecular Literature with EVEX: Connecting Genes through Events, Homology, and Indirect Associations.
Adv. Bioinformatics
Sofie Van Landeghem, Kai Hakala, Samuel Rönnqvist, Tapio Salakoski, Yves Van de Peer, Filip Ginter
2012 — conf
PubMed-Scale Event Extraction for Post-Translational Modifications, Epigenetics and Protein Structural Relations.
BioNLP@HLT-NAACL
Jari Björne, Sofie Van Landeghem, Sampo Pyysalo, Tomoko Ohta, Filip Ginter, Yves Van de Peer, Sophia Ananiadou, Tapio Salakoski
2012 J jnl
Semantically linking molecular entities in literature through entity relationships.
BMC Bioinform.
Sofie Van Landeghem, Jari Björne, Thomas Abeel, Bernard De Baets, Tapio Salakoski, Yves Van de Peer
2011 — conf
Detecting Entity Relations as a Supporting Task for Bio-Molecular Event Extraction.
BioNLP@ACL (Shared Task)
Sofie Van Landeghem, Thomas Abeel, Bernard De Baets, Yves Van de Peer
2011 — conf
EVEX: A PubMed-Scale Resource for Homology-Based Generalization of Text Mining Predictions.
BioNLP@ACL
Sofie Van Landeghem, Filip Ginter, Yves Van de Peer, Tapio Salakoski
2011 J jnl
High-Precision Bio-molecular Event Extraction from Text Using Parallel Binary Classifiers.
Comput. Intell.
Sofie Van Landeghem, Bernard De Baets, Yves Van de Peer, Yvan Saeys
2011 J jnl
U-Compare bio-event meta-service: compatible BioNLP event extraction services.
BMC Bioinform.
Yoshinobu Kano, Jari Björne, Filip Ginter, Tapio Salakoski, Ekaterina Buyko, Udo Hahn, K. Bretonnel Cohen, Karin Verspoor, Christophe Roeder, Lawrence E. Hunter, Halil Kilicoglu, Sabine Bergler, Sofie Van Landeghem, Thomas Van Parys, Yves Van de Peer, Makoto Miwa, Sophia Ananiadou, Mariana L. Neves, Alberto D. Pascual-Montano, Arzucan Özgür, Dragomir R. Radev, Sebastian Riedel, Rune Sætre, Hong-Woo Chun, Jin-Dong Kim, Sampo Pyysalo, Tomoko Ohta, Jun'ichi Tsujii
2010 J jnl
Discriminative and informative features for biomolecular text mining with ensemble feature selection.
Bioinform.
Sofie Van Landeghem, Thomas Abeel, Yvan Saeys, Yves Van de Peer
2010 — conf
Event based text mining for integrated network construction.
MLSB
Yvan Saeys, Sofie Van Landeghem, Yves Van de Peer
2010 J jnl
Highlights of the BioTM 2010 workshop on advances in bio text mining.
BMC Bioinform.
Thomas Abeel, Sofie Van Landeghem, Roser Morante, Vincent Van Asch, Yves Van de Peer, Walter Daelemans, Yvan Saeys
2010 — conf
Integration of Static Relations to Enhance Event Extraction from Text.
BioNLP@ACL
Sofie Van Landeghem, Sampo Pyysalo, Tomoko Ohta, Yves Van de Peer
2009 — conf
Analyzing text in search of bio-molecular events: a high-precision machine learning framework.
BioNLP@HLT-NAACL (Shared Task)
Sofie Van Landeghem, Yvan Saeys, Bernard De Baets, Yves Van de Peer