Siwei Xu

13 papers A* 1A 3C 1Journal 7Unranked 1
YearRankTypeTitle / Venue / Authors
2026 A* conf
OX-MABSR: A Benchmark for Open-domain Explainable Multimodal Aspect-Based Sentiment Reasoning.
AAAI
Xinjing Liu, Zixin Xue, Pengyue Lin, Xinyu Tu, Siwei Xu, Ruifan Li
2026 J jnl
Towards balancing the efficiency and effectiveness: a unified edit-based framework for automatic image captioning.
Multim. Syst.
Ruifan Li, Siwei Xu, Pengyue Lin, Fangxiang Feng, Zhangyu Ma
2025 — conf
A Generative Method with Elements Enhancement for Comparative Opinion Quintuple Extraction.
ICDM (Workshops)
Shuqin Ye, Xinjing Liu, Siwei Xu, Yongjun Huang, Xiaojie Wang, Ruifan Li
2025 J jnl
Single-cell omics arena: evaluation of large language models for automatic cell-type annotations on single-cell omics data via RNA-seq bridging.
Briefings Bioinform.
Junhao Liu, Siwei Xu, Yongxian Wu, Jing Zhang
2024 J jnl
Single-Cell Omics Arena: A Benchmark Study for Large Language Models on Cell Type Annotation Using Single-Cell Data.
CoRR
Junhao Liu, Siwei Xu, Lei Zhang, Jing Zhang
2024 C conf
Understanding Transcriptional Regulatory Redundancy by Learnable Global Subset Perturbations.
ACML
Junhao Liu, Siwei Xu, Dylan Riffle, Ziheng Duan, Martin Renqiang Min, Jing Zhang
2024 A conf
iHAST: Integrating Hybrid Attention for Super-Resolution in Spatial Transcriptomics.
BMVC
Xi Li, Jing Zhang, Ziheng Duan, Yi Dai, Siwei Xu
2024 A conf
iMIRACLE: An Iterative Multi-View Graph Neural Network to Model Intercellular Gene Regulation From Spatial Transcriptomic Data.
CIKM
Ziheng Duan, Siwei Xu, Cheyu Lee, Dylan Riffle, Jing Zhang
2024 A conf
scACT: Accurate Cross-modality Translation via Cycle-consistent Training from Unpaired Single-cell Data.
CIKM
Siwei Xu, Junhao Liu, Jing Zhang
2024 J jnl
scENCORE: leveraging single-cell epigenetic data to predict chromatin conformation using graph embedding.
Briefings Bioinform.
Ziheng Duan, Siwei Xu, Shushrruth Sai Srinivasan, Ahyeon Hwang, Cheyu Lee, Feng Yue, Mark Gerstein, Yu Luan, Matthew J. Girgenti, Jing Zhang
2022 J jnl
Expediting knowledge acquisition by a web framework for Knowledge Graph Exploration and Visualization (KGEV): case studies on COVID-19 and Human Phenotype Ontology.
BMC Medical Informatics Decis. Mak.
Jacqueline Peng, David Xu, Ryan Lee, Siwei Xu, Yunyun Zhou, Kai Wang
2022 J jnl
Integrating longitudinal clinical and microbiome data to predict growth faltering in preterm infants.
J. Biomed. Informatics
Jose Lugo-Martinez, Siwei Xu, Justine Levesque, Daniel Gallagher, Leslie A. Parker, Josef Neu, Christopher J. Stewart, Janet E. Berrington, Nicholas D. Embleton, Gregory Young, Katherine E. Gregory, Misty Good, Arti Tandon, David Genetti, Tracy Warren, Ziv Bar-Joseph
2022 J jnl
Translator: A
J. Comput. Biol.
Siwei Xu, Mario Skarica, Ahyeon Hwang, Yi Dai, Cheyu Lee, Matthew J. Girgenti, Jing Zhang