Simone G. Riva

12 papers B 2C 6Journal 3Unranked 1

Year	Rank	Type	Title / Venue / Authors
2025	C	`conf`	GENESIS: Generating scRNA-Seq data from Multiome Gene Expression. CIBCB Simone G. Riva, Brynelle Myers, Francesca M. Buffa, Andrea Tangherloni
2025	B	`conf`	Modelling constant and cell-type specific CTCF sites by using Convolutional Neural Networks. IJCNN Edward Sanders, Simone G. Riva, Emily Georgiades, Matthew Baxter, Jim R. Hughes
2025	C	`conf`	REnformer, a single-cell ATAC-seq predicting model to investigate open chromatin sites. CIBCB Simone G. Riva, Edward Sanders, Tom Wilson, Nicolò Stranieri, E. Ravza Gür, Matthew Baxter, Jim R. Hughes
2023	C	`conf`	Consensus Clustering Strategy for Cell Type Assignments of scRNA-seq Data. CIBCB Simone G. Riva, Brynelle Myers, Paolo Cazzaniga, Francesca M. Buffa, Andrea Tangherloni
2023	J	`jnl`	MAGNETO: Cell type marker panel generator from single-cell transcriptomic data. J. Biomed. Informatics Andrea Tangherloni, Simone G. Riva, Brynelle Myers, Francesca M. Buffa, Paolo Cazzaniga
2022	C	`conf`	A Deep Learning Pipeline for the Automatic cell type Assignment of scRNA-seq Data. CIBCB Simone G. Riva, Brynelle Myers, Paolo Cazzaniga, Andrea Tangherloni
2022	C	`conf`	Multi-objective Optimization for Marker Panel Identification in Single-cell Data. CIBCB Andrea Tangherloni, Simone G. Riva, Brynelle Myers, Paolo Cazzaniga
2022	C	`conf`	Predicting and Characterizing Legal Claims of Hospitals with Computational Intelligence: the Legal and Ethical Implications. CIBCB Chiara Gallese, Caro Fuchs, Simone G. Riva, Emanuela Foglia, Fabrizio Schettini, Lucrezia Ferrario, Elena Falletti, Marco S. Nobile
2022	J	`jnl`	SMGen: A Generator of Synthetic Models of Biochemical Reaction Networks. Symmetry Simone G. Riva, Paolo Cazzaniga, Marco S. Nobile, Simone Spolaor, Leonardo Rundo, Daniela Besozzi, Andrea Tangherloni
2022	J	`jnl`	SMaSH: a scalable, general marker gene identification framework for single-cell RNA-sequencing. BMC Bioinform. M. E. Nelson, Simone G. Riva, Ana Cvejic
2021	—	`conf`	Integration of Multiple scRNA-Seq Datasets on the Autoencoder Latent Space. BIBM Simone G. Riva, Paolo Cazzaniga, Andrea Tangherloni
2021	B	`conf`	The Impact of Representation on the Optimization of Marker Panels for Single-cell RNA Data. CEC Andrea Tangherloni, Simone G. Riva, Simone Spolaor, Daniela Besozzi, Marco S. Nobile, Paolo Cazzaniga