Simon R. Arridge

133 papers A 2B 1Journal 88Unranked 41

Year	Rank	Type	Title / Venue / Authors
2025	J	`jnl`	Learned Single-Pixel Fluorescence Microscopy. CoRR Serban Cristian Tudosie, Valerio Gandolfi, Shivaprasad Varakkoth, Andrea Farina, Cosimo D'Andrea, Simon R. Arridge
2025	J	`jnl`	Learning Binary Sampling Patterns for Single-Pixel Imaging using Bilevel Optimisation. CoRR Serban Cristian Tudosie, Alexander Denker, Zeljko Kereta, Simon R. Arridge
2025	—	`conf`	Plug-and-Play Half-Quadratic Splitting for Ptychography. SSVM (1) Alexander Denker, Johannes Hertrich, Zeljko Kereta, Silvia Cipiccia, Ecem Erin, Simon R. Arridge
2025	J	`jnl`	Steerable Conditional Diffusion for Out-of-Distribution Adaptation in Medical Image Reconstruction. IEEE Trans. Medical Imaging Riccardo Barbano, Alexander Denker, Hyungjin Chung, Tae-Hoon Roh, Simon R. Arridge, Peter Maass, Bangti Jin, Jong Chul Ye
2024	J	`jnl`	Data-driven approaches for electrical impedance tomography image segmentation from partial boundary data. CoRR Alexander Denker, Zeljko Kereta, Imraj RD Singh, Tom Freudenberg, Tobias Kluth, Peter Maass, Simon R. Arridge
2024	J	`jnl`	Equidistribution-based training of Free Knot Splines and ReLU Neural Networks. CoRR Simone Appella, Simon R. Arridge, Chris J. Budd, Teo Deveney, Lisa Maria Kreusser
2024	J	`jnl`	Learning Governing Equations of Unobserved States in Dynamical Systems. CoRR Gevik Grigorian, Sandip V. George, Simon R. Arridge
2024	J	`jnl`	Plug-and-Play Half-Quadratic Splitting for Ptychography. CoRR Alexander Denker, Johannes Hertrich, Zeljko Kereta, Silvia Cipiccia, Ecem Erin, Simon R. Arridge
2023	J	`jnl`	An Investigation of Stochastic Variance Reduction Algorithms for Relative Difference Penalized 3D PET Image Reconstruction. IEEE Trans. Medical Imaging Robert Twyman, Simon R. Arridge, Zeljko Kereta, Bangti Jin, Ludovica Brusaferri, Sangtae Ahn, Charles W. Stearns, Brian F. Hutton, Irene A. Burger, Fotis Kotasidis, Kris Thielemans
2023	J	`jnl`	Enhancement of instrumented ultrasonic tracking images using deep learning. Int. J. Comput. Assist. Radiol. Surg. Efthymios Maneas, Andreas Hauptmann, Erwin J. Alles, Wenfeng Xia, Sacha Noimark, Anna L. David, Simon R. Arridge, Adrien E. Desjardins
2023	J	`jnl`	HyperSLICE: HyperBand optimised Spiral for Low-latency Interactive Cardiac Examination. CoRR Olivier Jaubert, Javier Montalt-Tordera, Daniel Knight, Simon R. Arridge, Jennifer Anne Steeden, Vivek Muthurangu
2023	J	`jnl`	Inverse Problems with Learned Forward Operators. CoRR Simon R. Arridge, Andreas Hauptmann, Yury Korolev
2023	J	`jnl`	Investigating the use of publicly available natural videos to learn Dynamic MR image reconstruction. CoRR Olivier Jaubert, Michele Pascale, Javier Montalt-Tordera, Julius Akesson, Ruta Virsinskaite, Daniel Knight, Simon R. Arridge, Jennifer Anne Steeden, Vivek Muthurangu
2023	J	`jnl`	Score-Based Generative Models for PET Image Reconstruction. CoRR Imraj RD Singh, Alexander Denker, Riccardo Barbano, Zeljko Kereta, Bangti Jin, Kris Thielemans, Peter Maass, Simon R. Arridge
2023	J	`jnl`	j-Wave: An open-source differentiable wave simulator. SoftwareX Antonio Stanziola, Simon R. Arridge, Ben T. Cox, Bradley E. Treeby
2022	J	`jnl`	A Learned Born Series for Highly-Scattering Media. CoRR Antonio Stanziola, Simon R. Arridge, Ben T. Cox, Bradley E. Treeby
2022	J	`jnl`	A Model-Based Iterative Learning Approach for Diffuse Optical Tomography. IEEE Trans. Medical Imaging Meghdoot Mozumder, Andreas Hauptmann, Ilkka Nissilä, Simon R. Arridge, Tanja Tarvainen
2022	J	`jnl`	FReSCO: Flow Reconstruction and Segmentation for low latency Cardiac Output monitoring using deep artifact suppression and segmentation. CoRR Olivier Jaubert, Javier Montalt-Tordera, James Brown, Daniel Knight, Simon R. Arridge, Jennifer Anne Steeden, Vivek Muthurangu
2022	J	`jnl`	Unsupervised denoising for sparse multi-spectral computed tomography. CoRR Satu I. Inkinen, Mikael A. K. Brix, Miika T. Nieminen, Simon R. Arridge, Andreas Hauptmann
2022	J	`jnl`	j-Wave: An open-source differentiable wave simulator. CoRR Antonio Stanziola, Simon R. Arridge, Ben T. Cox, Bradley E. Treeby
2021	J	`jnl`	A Helmholtz equation solver using unsupervised learning: Application to transcranial ultrasound. J. Comput. Phys. Antonio Stanziola, Simon R. Arridge, Ben T. Cox, Bradley E. Treeby
2021	J	`jnl`	A research framework for writing differentiable PDE discretizations in JAX. CoRR Antonio Stanziola, Simon R. Arridge, Ben T. Cox, Bradley E. Treeby
2021	J	`jnl`	Material Decomposition in Spectral CT Using Deep Learning: A Sim2Real Transfer Approach. IEEE Access Juan F. P. J. Abascal, Nicolas Ducros, Valeriya Pronina, Simon Rit, Pierre-Antoine Rodesch, Thomas Broussaud, Suzanne Bussod, Philippe C. Douek, Andreas Hauptmann, Simon R. Arridge, Françoise Peyrin
2021	J	`jnl`	Neural Network Kalman filtering for 3D object tracking from linear array ultrasound data. CoRR Arttu Arjas, Erwin J. Alles, Efthymios Maneas, Simon R. Arridge, Adrien E. Desjardins, Mikko J. Sillanpää, Andreas Hauptmann
2021	J	`jnl`	On Learned Operator Correction in Inverse Problems. SIAM J. Imaging Sci. Sebastian Lunz, Andreas Hauptmann, Tanja Tarvainen, Carola-Bibiane Schönlieb, Simon R. Arridge
2021	J	`jnl`	Photoacoustic Reconstruction Using Sparsity in Curvelet Frame: Image Versus Data Domain. IEEE Trans. Computational Imaging Bolin Pan, Simon R. Arridge, Felix Lucka, Ben T. Cox, Nam Huynh, Paul C. Beard, Edward Z. Zhang, Marta M. Betcke
2021	J	`jnl`	Stochastic EM methods with Variance Reduction for Penalised PET Reconstructions. CoRR Zeljko Kereta, Robert Twyman, Simon R. Arridge, Kris Thielemans, Bangti Jin
2021	J	`jnl`	Unsupervised Knowledge-Transfer for Learned Image Reconstruction. CoRR Riccardo Barbano, Zeljko Kereta, Andreas Hauptmann, Simon R. Arridge, Bangti Jin
2020	J	`jnl`	A Helmholtz equation solver using unsupervised learning: Application to transcranial ultrasound. CoRR Antonio Stanziola, Simon R. Arridge, Ben T. Cox, Bradley E. Treeby
2020	J	`jnl`	Benefits of Using a Spatially-Variant Penalty Strength With Anatomical Priors in PET Reconstruction. IEEE Trans. Medical Imaging Yu-Jung Tsai, Georg Schramm, Sangtae Ahn, Alexandre Bousse, Simon R. Arridge, Johan Nuyts, Brian F. Hutton, Charles W. Stearns, Kris Thielemans
2020	—	`conf`	Convolutional Neural Network for Material Decomposition in Spectral CT Scans. EUSIPCO Suzanne Bussod, Juan F. P. J. Abascal, Simon R. Arridge, Andreas Hauptmann, Christine Chappard, Nicolas Ducros, Françoise Peyrin
2020	—	`conf`	Material Decomposition Problem in Spectral CT: A Transfer Deep Learning Approach. ISBI Workshops Juan F. P. J. Abascal, Nicolas Ducros, Valeriya Pronina, Suzanne Bussod, Andreas Hauptmann, Simon R. Arridge, Philippe Douek, Françoise Peyrin
2020	J	`jnl`	Multi-Scale Learned Iterative Reconstruction. IEEE Trans. Computational Imaging Andreas Hauptmann, Jonas Adler, Simon R. Arridge, Ozan Öktem
2020	J	`jnl`	Networks for Nonlinear Diffusion Problems in Imaging. J. Math. Imaging Vis. Simon R. Arridge, Andreas Hauptmann
2020	J	`jnl`	On Learned Operator Correction. CoRR Sebastian Lunz, Andreas Hauptmann, Tanja Tarvainen, Carola-Bibiane Schönlieb, Simon R. Arridge
2020	J	`jnl`	Photoacoustic Reconstruction Using Sparsity in Curvelet Frame. CoRR Bolin Pan, Simon R. Arridge, Felix Lucka, Ben T. Cox, Nam Huynh, Paul C. Beard, Edward Z. Zhang, Marta M. Betcke
2020	B	`conf`	Quantifying Model Uncertainty in Inverse Problems via Bayesian Deep Gradient Descent. ICPR Riccardo Barbano, Chen Zhang, Simon R. Arridge, Bangti Jin
2020	J	`jnl`	Quantifying Model Uncertainty in Inverse Problems via Bayesian Deep Gradient Descent. CoRR Riccardo Barbano, Chen Zhang, Simon R. Arridge, Bangti Jin
2020	J	`jnl`	Quantifying Sources of Uncertainty in Deep Learning-Based Image Reconstruction. CoRR Riccardo Barbano, Zeljko Kereta, Chen Zhang, Andreas Hauptmann, Simon R. Arridge, Bangti Jin
2019	J	`jnl`	A pseudospectral method for solution of the radiative transport equation. J. Comput. Phys. Samuel Powell, Ben T. Cox, Simon R. Arridge
2019	J	`jnl`	Multi-Scale Learned Iterative Reconstruction. CoRR Andreas Hauptmann, Jonas Adler, Simon R. Arridge, Ozan Öktem
2019	J	`jnl`	Rapid Whole-Heart CMR with Single Volume Super-resolution. CoRR Jennifer Anne Steeden, Michael Quail, Alexander Gotschy, Andreas Hauptmann, Simon R. Arridge, Rodney Jones, Vivek Muthurangu
2019	J	`jnl`	Solving inverse problems using data-driven models. Acta Numer. Simon R. Arridge, Peter Maass, Ozan Öktem, Carola-Bibiane Schönlieb
2019	—	`conf`	Tomosynthesis method for depth resolution of beta emitters. Biomedical Applications in Molecular, Structural, and Functional Imaging Thomy Mertzanidou, Nick Calvert, David S. Tuch, Danail Stoyanov, Simon R. Arridge
2018	—	`conf`	Approximate k-Space Models and Deep Learning for Fast Photoacoustic Reconstruction. MLMIR@MICCAI Andreas Hauptmann, Ben T. Cox, Felix Lucka, Nam Huynh, Marta M. Betcke, Paul C. Beard, Simon R. Arridge
2018	J	`jnl`	Approximate k-space models and Deep Learning for fast photoacoustic reconstruction. CoRR Andreas Hauptmann, Ben T. Cox, Felix Lucka, Nam Huynh, Marta M. Betcke, Paul C. Beard, Simon R. Arridge
2018	J	`jnl`	DAGAN: Deep De-Aliasing Generative Adversarial Networks for Fast Compressed Sensing MRI Reconstruction. IEEE Trans. Medical Imaging Guang Yang, Simiao Yu, Hao Dong, Gregory G. Slabaugh, Pier Luigi Dragotti, Xujiong Ye, Fangde Liu, Simon R. Arridge, Jennifer Keegan, Yike Guo, David N. Firmin
2018	J	`jnl`	Dynamic causal modelling on infant fNIRS data: A validation study on a simultaneously recorded fNIRS-fMRI dataset. NeuroImage Chiara Bulgarelli, Anna Blasi, Simon R. Arridge, Samuel Powell, Carina C. J. M. de Klerk, Victoria Southgate, Sabrina Brigadoi, William D. Penny, Sungho Tak, Antonia F. de C. Hamilton
2018	J	`jnl`	Enhancing Compressed Sensing 4D Photoacoustic Tomography by Simultaneous Motion Estimation. SIAM J. Imaging Sci. Felix Lucka, Nam Huynh, Marta M. Betcke, Edward Zhang, Paul C. Beard, Ben T. Cox, Simon R. Arridge
2018	J	`jnl`	Fast Quasi-Newton Algorithms for Penalized Reconstruction in Emission Tomography and Further Improvements via Preconditioning. IEEE Trans. Medical Imaging Yu-Jung Tsai, Alexandre Bousse, Matthias J. Ehrhardt, Charles W. Stearns, Sangtae Ahn, Brian F. Hutton, Simon R. Arridge, Kris Thielemans
2018	J	`jnl`	Model-Based Learning for Accelerated, Limited-View 3-D Photoacoustic Tomography. IEEE Trans. Medical Imaging Andreas Hauptmann, Felix Lucka, Marta M. Betcke, Nam Huynh, Jonas Adler, Ben T. Cox, Paul C. Beard, Sébastien Ourselin, Simon R. Arridge
2018	J	`jnl`	Networks for Nonlinear Diffusion Problems in Imaging. CoRR Simon R. Arridge, Andreas Hauptmann
2018	J	`jnl`	NiftyPET: a High-throughput Software Platform for High Quantitative Accuracy and Precision PET Imaging and Analysis. Neuroinformatics Pawel J. Markiewicz, Matthias J. Ehrhardt, Kjell Erlandsson, Philip J. Noonan, Anna Barnes, Jonathan M. Schott, David Atkinson, Simon R. Arridge, Brian F. Hutton, Sébastien Ourselin
2018	J	`jnl`	Real-time Cardiovascular MR with Spatio-temporal De-aliasing using Deep Learning - Proof of Concept in Congenital Heart Disease. CoRR Andreas Hauptmann, Simon R. Arridge, Felix Lucka, Vivek Muthurangu, Jennifer Anne Steeden
2017	—	`conf`	A simulation study of spectral Čerenkov luminescence imaging for tumour margin estimation. Biomedical Applications in Molecular, Structural, and Functional Imaging Nick Calvert, Yusuf Helo, Thomy Mertzanidou, David S. Tuch, Simon R. Arridge, Danail Stoyanov
2017	J	`jnl`	Acoustic Wave Field Reconstruction From Compressed Measurements With Application in Photoacoustic Tomography. IEEE Trans. Computational Imaging Marta M. Betcke, Ben T. Cox, Nam Huynh, Edward Z. Zhang, Paul C. Beard, Simon R. Arridge
2017	J	`jnl`	Bayesian Estimation of Intrinsic Tissue Oxygenation and Perfusion From RGB Images. IEEE Trans. Medical Imaging Geoffrey Jones, Neil T. Clancy, Yusuf Helo, Simon R. Arridge, Daniel S. Elson, Danail Stoyanov
2017	J	`jnl`	Deep De-Aliasing for Fast Compressive Sensing MRI. CoRR Simiao Yu, Hao Dong, Guang Yang, Greg G. Slabaugh, Pier Luigi Dragotti, Xujiong Ye, Fangde Liu, Simon R. Arridge, Jennifer Keegan, David N. Firmin, Yike Guo
2017	J	`jnl`	Direct Parametric Reconstruction With Joint Motion Estimation/Correction for Dynamic Brain PET Data. IEEE Trans. Medical Imaging Jieqing Jiao, Alexandre Bousse, Kris Thielemans, Ninon Burgos, Philip S. J. Weston, Jonathan M. Schott, David Atkinson, Simon R. Arridge, Brian F. Hutton, Pawel Markiewicz, Sébastien Ourselin
2017	—	`conf`	Fast Estimation of Haemoglobin Concentration in Tissue Via Wavelet Decomposition. MICCAI (2) Geoffrey Jones, Neil T. Clancy, Xiaofei Du, Maria Robu, Simon R. Arridge, Daniel S. Elson, Danail Stoyanov
2017	J	`jnl`	Fast Estimation of Haemoglobin Concentration in Tissue Via Wavelet Decomposition. CoRR Geoffrey Jones, Neil T. Clancy, Xiaofei Du, Maria Robu, Simon R. Arridge, Daniel S. Elson, Danail Stoyanov
2017	J	`jnl`	Model based learning for accelerated, limited-view 3D photoacoustic tomography. CoRR Andreas Hauptmann, Felix Lucka, Marta M. Betcke, Nam Huynh, Ben T. Cox, Paul C. Beard, Sébastien Ourselin, Simon R. Arridge
2016	J	`jnl`	Direct Estimation of Optical Parameters From Photoacoustic Time Series in Quantitative Photoacoustic Tomography. IEEE Trans. Medical Imaging Aki Pulkkinen, Ben T. Cox, Simon R. Arridge, Hwan Goh, Jari P. Kaipio, Tanja Tarvainen
2016	J	`jnl`	Gradient-Based Quantitative Image Reconstruction in Ultrasound-Modulated Optical Tomography: First Harmonic Measurement Type in a Linearised Diffusion Formulation. IEEE Trans. Medical Imaging Samuel Powell, Simon R. Arridge, Terence S. Leung
2016	J	`jnl`	Inference of Haemoglobin Concentration From Stereo RGB. CoRR Geoffrey Jones, Neil T. Clancy, Simon R. Arridge, Daniel S. Elson, Danail Stoyanov
2016	—	`conf`	Inference of Tissue Haemoglobin Concentration from Stereo RGB. MIAR Geoffrey Jones, Neil T. Clancy, Simon R. Arridge, Daniel S. Elson, Danail Stoyanov
2016	J	`jnl`	Maximum-Likelihood Joint Image Reconstruction/Motion Estimation in Attenuation-Corrected Respiratory Gated PET/CT Using a Single Attenuation Map. IEEE Trans. Medical Imaging Alexandre Bousse, Ottavia Bertolli, David Atkinson, Simon R. Arridge, Sébastien Ourselin, Brian F. Hutton, Kris Thielemans
2016	J	`jnl`	PET Reconstruction With an Anatomical MRI Prior Using Parallel Level Sets. IEEE Trans. Medical Imaging Matthias J. Ehrhardt, Pawel Markiewicz, Maria Liljeroth, Anna Barnes, Ville Kolehmainen, John S. Duncan, Luis Pizarro, David Atkinson, Brian F. Hutton, Sébastien Ourselin, Kris Thielemans, Simon R. Arridge
2015	J	`jnl`	A Reconstruction-Classification Method for Multifrequency Electrical Impedance Tomography. IEEE Trans. Medical Imaging Emma Malone, Gustavo Sato dos Santos, David S. Holder, Simon R. Arridge
2015	—	`conf`	Detail-Preserving PET Reconstruction with Sparse Image Representation and Anatomical Priors. IPMI Jieqing Jiao, Pawel Markiewicz, Ninon Burgos, David Atkinson, Brian F. Hutton, Simon R. Arridge, Sébastien Ourselin
2015	J	`jnl`	Finite element approximation of the radiative transport equation in a medium with piece-wise constant refractive index. J. Comput. Phys. Ossi Lehtikangas, Tanja Tarvainen, Arnold D. Kim, Simon R. Arridge
2015	—	`ch.`	Optical Imaging. Handbook of Mathematical Methods in Imaging Simon R. Arridge, Jari P. Kaipio, Ville Kolehmainen, Tanja Tarvainen
2015	—	`conf`	Practical PET respiratory motion correction in clinical simultaneous PET/MR. ISBI Richard Manber, David Atkinson, Kris Thielemans, Brian F. Hutton, Anna Barnes, Celia O'Meara, Simon Wan, Sébastien Ourselin, Simon R. Arridge
2015	—	`conf`	Robust CT Synthesis for Radiotherapy Planning: Application to the Head and Neck Region. MICCAI (2) Ninon Burgos, Manuel Jorge Cardoso, Filipa Guerreiro, Catarina Veiga, Marc Modat, Jamie McClelland, Antje-Christin Knopf, Shonit Punwani, David Atkinson, Simon R. Arridge, Brian F. Hutton, Sébastien Ourselin
2015	J	`jnl`	Solving Boundary Integral Problems with BEM++. ACM Trans. Math. Softw. Wojciech Smigaj, Timo Betcke, Simon R. Arridge, Joel Phillips, Martin Schweiger
2015	—	`conf`	Subject-specific Models for the Analysis of Pathological FDG PET Data. MICCAI (2) Ninon Burgos, Manuel Jorge Cardoso, Alex F. Mendelson, Jonathan M. Schott, David Atkinson, Simon R. Arridge, Brian F. Hutton, Sébastien Ourselin
2014	J	`jnl`	A 4D neonatal head model for diffuse optical imaging of pre-term to term infants. NeuroImage Sabrina Brigadoi, Paul Aljabar, Maria Kuklisova-Murgasova, Simon R. Arridge, Robert J. Cooper
2014	J	`jnl`	Attenuation Correction Synthesis for Hybrid PET-MR Scanners: Application to Brain Studies. IEEE Trans. Medical Imaging Ninon Burgos, Manuel Jorge Cardoso, Kris Thielemans, Marc Modat, Stefano Pedemonte, John C. Dickson, Anna Barnes, Rebekah Ahmed, Colin J. Mahoney, Jonathan M. Schott, John S. Duncan, David Atkinson, Simon R. Arridge, Brian F. Hutton, Sébastien Ourselin
2014	—	`conf`	Deblurring Multispectral Laparoscopic Images. IPCAI Geoffrey Jones, Neil Clancy, Simon R. Arridge, Daniel S. Elson, Danail Stoyanov
2014	J	`jnl`	Direct parametric reconstruction from undersampled (k, t)-space data in dynamic contrast enhanced MRI. Medical Image Anal. Nikolaos Dikaios, Simon R. Arridge, Valentin Hamy, Shonit Punwani, David Atkinson
2014	J	`jnl`	Dynamic MR Image Reconstruction-Separation From Undersampled (${\bf k}, t$)-Space via Low-Rank Plus Sparse Prior. IEEE Trans. Medical Imaging Benjamin Trémoulhéac, Nikolaos Dikaios, David Atkinson, Simon R. Arridge
2014	J	`jnl`	Efficient Determination of the Uncertainty for the Optimization of SPECT System Design: A Subsampled Fisher Information Matrix. IEEE Trans. Medical Imaging Niccolo Fuin, Stefano Pedemonte, Simon R. Arridge, Sébastien Ourselin, Brian F. Hutton
2014	—	`conf`	Joint Parametric Reconstruction and Motion Correction Framework for Dynamic PET Data. MICCAI (1) Jieqing Jiao, Alexandre Bousse, Kris Thielemans, Pawel Markiewicz, Ninon Burgos, David Atkinson, Simon R. Arridge, Brian F. Hutton, Sébastien Ourselin
2014	—	`conf`	Low-rank and (X-F)-space sparsity via fast composite splitting for accelerated dynamic MR imaging. ISBI Benjamin Trémoulhéac, David Atkinson, Simon R. Arridge
2014	J	`jnl`	Multifrequency Electrical Impedance Tomography Using Spectral Constraints. IEEE Trans. Medical Imaging Emma Malone, Gustavo Sato dos Santos, David S. Holder, Simon R. Arridge
2014	J	`jnl`	Vector-Valued Image Processing by Parallel Level Sets. IEEE Trans. Image Process. Matthias Joachim Ehrhardt, Simon R. Arridge
2013	—	`conf`	Attenuation Correction Synthesis for Hybrid PET-MR Scanners. MICCAI (1) Ninon Burgos, Manuel Jorge Cardoso, Marc Modat, Stefano Pedemonte, John C. Dickson, Anna Barnes, John S. Duncan, David Atkinson, Simon R. Arridge, Brian F. Hutton, Sébastien Ourselin
2013	J	`jnl`	Bayesian Image Reconstruction in Quantitative Photoacoustic Tomography. IEEE Trans. Medical Imaging Tanja Tarvainen, Aki Pulkkinen, Ben T. Cox, Jari P. Kaipio, Simon R. Arridge
2013	—	`conf`	Fast dynamic MRI via nuclear norm minimization and accelerated proximal gradient. ISBI Benjamin Trémoulhéac, David Atkinson, Simon R. Arridge
2013	J	`jnl`	Numerical Methods for Coupled Reconstruction and Registration in Digital Breast Tomosynthesis. CoRR Guang Yang, John H. Hipwell, David J. Hawkes, Simon R. Arridge
2012	—	`conf`	Joint Registration and Limited-Angle Reconstruction of Digital Breast Tomosynthesis. Digital Mammography / IWDM Guang Yang, John H. Hipwell, Christine Tanner, David J. Hawkes, Simon R. Arridge
2012	—	`conf`	Steady-State Model of the Radio-Pharmaceutical Uptake for MR-PET. MICCAI (1) Stefano Pedemonte, Manuel Jorge Cardoso, Simon R. Arridge, Brian F. Hutton, Sébastien Ourselin
2012	—	`conf`	Virtual source patterns for fluorescence tomography. ISBI Nicolas Ducros, Andrea Bassi, Cosimo D'Andrea, Gianluca Valentini, Martin Schweiger, Simon R. Arridge
2011	—	`conf`	4-D Generative Model for PET/MRI Reconstruction. MICCAI (1) Stefano Pedemonte, Alexandre Bousse, Brian F. Hutton, Simon R. Arridge, Sébastien Ourselin
2011	J	`jnl`	A Nonrigid Registration Framework Using Spatially Encoded Mutual Information and Free-Form Deformations. IEEE Trans. Medical Imaging Xiahai Zhuang, Simon R. Arridge, David J. Hawkes, Sébastien Ourselin
2011	—	`conf`	Edge preserving bowsher prior with nonlocal weighting for 3D spect reconstruction. ISBI Daniil Kazantsev, Alexandre Bousse, Stefano Pedemonte, Simon R. Arridge, Brian F. Hutton, Sébastien Ourselin
2011	J	`jnl`	PET Image Reconstruction Using Information Theoretic Anatomical Priors. IEEE Trans. Medical Imaging Sangeetha Somayajula, Christos Panagiotou, Anand Rangarajan, Quanzheng Li, Simon R. Arridge, Richard M. Leahy
2011	—	`conf`	Probabilistic Graphical Model of SPECT/MRI. MLMI Stefano Pedemonte, Alexandre Bousse, Brian F. Hutton, Simon R. Arridge, Sébastien Ourselin
2011	J	`jnl`	Variable order spherical harmonic expansion scheme for the radiative transport equation using finite elements. J. Comput. Phys. P. Surya Mohan, Tanja Tarvainen, Martin Schweiger, Aki Pulkkinen, Simon R. Arridge
2010	J	`jnl`	Combination of Boundary Element Method and Finite Element Method in Diffuse Optical Tomography. IEEE Trans. Biomed. Eng. Josias P. Elisee, Adam P. Gibson, Simon R. Arridge
2010	—	`conf`	Combined Reconstruction and Registration of Digital Breast Tomosynthesis. Digital Mammography / IWDM Guang Yang, John H. Hipwell, Matthew J. Clarkson, Christine Tanner, Thomy Mertzanidou, Spencer Gunn, Sébastien Ourselin, David J. Hawkes, Simon R. Arridge
2009	—	`conf`	Diffusion Optical Tomography Using Entropic Priors. ISBI Christos Panagiotou, Sangeetha Somayajula, Adam P. Gibson, Martin Schweiger, Richard M. Leahy, Simon R. Arridge
2009	—	`conf`	Personalised Electromechanical Model of the Heart for the Prediction of the Acute Effects of Cardiac Resynchronisation Therapy. FIMH Maxime Sermesant, Florence Billet, Radomír Chabiniok, Tommaso Mansi, Phani Chinchapatnam, Philippe Moireau, Jean-Marc Peyrat, Kawal S. Rhode, Matthew Ginks, Pier Lambiase, Simon R. Arridge, Hervé Delingette, Michel Sorine, C. Aldo Rinaldi, Dominique Chapelle, Reza Razavi, Nicholas Ayache
2009	—	`conf`	Voxel Based Adaptive Meshless Method for Cardiac Electrophysiology Simulation. FIMH Phani Chinchapatnam, Kawal S. Rhode, Matthew Ginks, Prasanth B. Nair, Reza Razavi, Simon R. Arridge, Maxime Sermesant
2008	—	`conf`	3D Digital Breast Tomosynthesis Using Total Variation Regularization. Digital Mammography / IWDM Iason Kastanis, Simon R. Arridge, Alex Stewart, Spencer Gunn, Christer Ullberg, Tom Francke
2008	—	`conf`	An Atlas-Based Segmentation Propagation Framework Using Locally Affine Registration - Application to Automatic Whole Heart Segmentation. MICCAI (2) Xiahai Zhuang, Kawal S. Rhode, Simon R. Arridge, Reza Razavi, Derek L. G. Hill, David J. Hawkes, Sébastien Ourselin
2008	J	`jnl`	Model-Based Imaging of Cardiac Apparent Conductivity and Local Conduction Velocity for Diagnosis and Planning of Therapy. IEEE Trans. Medical Imaging Phani Chinchapatnam, Kawal S. Rhode, Matthew Ginks, C. Aldo Rinaldi, Pier Lambiase, Reza Razavi, Simon R. Arridge, Maxime Sermesant
2008	J	`jnl`	Use of anisotropic modelling in electrical impedance tomography; Description of method and preliminary assessment of utility in imaging brain function in the adult human head. NeuroImage Juan-Felipe P. J. Abascal, Simon R. Arridge, David Atkinson, Raya Horesh, Lorenzo Fabrizi, Marzia De Lucia, Lior Horesh, Richard H. Bayford, David S. Holder
2007	—	`conf`	Anisotropic Wave Propagation and Apparent Conductivity Estimation in a Fast Electrophysiological Model: Application to XMR Interventional Imaging. MICCAI (1) Phani Chinchapatnam, Kawal S. Rhode, Andrew P. King, Gang Gao, YingLiang Ma, Tobias Schaeffter, David J. Hawkes, Reza Razavi, Derek L. G. Hill, Simon R. Arridge, Maxime Sermesant
2006	—	`conf`	Approximation Errors and Model Reduction in Optical Tomography. EMBC Ville Kolehmainen, Simon R. Arridge, Jari P. Kaipio, Martin Schweiger, Erkki Somersalo, Tanja Tarvainen, Marko Vauhkonen
2006	J	`jnl`	Dynamic physiological modeling for functional diffuse optical tomography. NeuroImage Solomon Gilbert Diamond, Theodore J. Huppert, Ville Kolehmainen, Maria Angela Franceschini, Jari P. Kaipio, Simon R. Arridge, David A. Boas
2006	J	`jnl`	Three dimensional optical imaging of blood volume and oxygenation in the neonatal brain. NeuroImage Topun Austin, Adam P. Gibson, Gilberto Branco, Roza Md. Yusof, Simon R. Arridge, Judith Meek, John S. Wyatt, David T. Delpy, Jeremy C. Hebden
2006	J	`jnl`	Three-dimensional whole-head optical tomography of passive motor evoked responses in the neonate. NeuroImage Adam P. Gibson, Topun Austin, Nick Everdell, Martin Schweiger, Simon R. Arridge, Judith Meek, John S. Wyatt, David T. Delpy, Jeremy C. Hebden
2005	—	`conf`	An Inverse Problem Approach to the Estimation of Volume Change. MICCAI (2) Martin Schweiger, Oscar Camara-Rey, William R. Crum, Emma Lewis, Julia A. Schnabel, Simon R. Arridge, Derek L. G. Hill, Nick C. Fox
2005	—	`conf`	Physiological System Identification with the Kalman Filter in Diffuse Optical Tomography. MICCAI (2) Solomon Gilbert Diamond, Theodore J. Huppert, Ville Kolehmainen, Maria Angela Franceschini, Jari P. Kaipio, Simon R. Arridge, David A. Boas
2004	J	`jnl`	Diffusion tensor magnetic resonance image regularization. Medical Image Anal. Olivier Coulon, Daniel C. Alexander, Simon R. Arridge
2004	—	`conf`	Reconstruction of the Heart Boundary from Undersampled Cardiac MRI using Fourier Shape Descriptors and Local Basis Functions. ISBI Simon R. Arridge, Iason Kastanis, Avi Silver, Derek L. G. Hill, Reza Razavi
2004	—	`conf`	Time Domain Optical Tomography. ISBI Simon R. Arridge
2003	J	`jnl`	Computational aspects of diffuse optical tomography. Comput. Sci. Eng. Martin Schweiger, Adam P. Gibson, Simon R. Arridge
2003	J	`jnl`	Image reconstruction in optical tomography using local basis functions. J. Electronic Imaging Martin Schweiger, Simon R. Arridge
2001	—	`conf`	A Regularization Scheme for Diffusion Tensor Magnetic Resonance Images. IPMI Olivier Coulon, Daniel C. Alexander, Simon R. Arridge
2000	J	`jnl`	A method for three-dimensional time-resolved optical tomography. Int. J. Imaging Syst. Technol. Simon R. Arridge, Jeremy C. Hebden, Martin Schweiger, Florian E. W. Schmidt, Martin E. Fry, Elizabeth M. C. Hillman, Hamid Dehghani, David T. Delpy
1999	J	`jnl`	A survey of hierarchical non-linear medical image registration. Pattern Recognit. Hava Lester, Simon R. Arridge
1999	J	`jnl`	Active shape focusing. Image Vis. Comput. Julia A. Schnabel, Simon R. Arridge
1999	A	`conf`	Non-linear Registration using a Finite Element Method. BMVC Manlio Valdivieso Casique, Simon R. Arridge
1999	—	`conf`	Non-linear Registration with the Variable Viscosity Fluid Algorithm. IPMI Hava Lester, Simon R. Arridge, Kalvis M. Jansons, Louis Lemieux, Joseph V. Hajnal, Anjela Oatridge
1998	J	`jnl`	Application of the Extremum Stack to Neurological MRI. IEEE Trans. Medical Imaging Andrew Simmons, Simon R. Arridge, Paul S. Tofts, Gareth J. Barker
1997	—	`conf`	Multi-Scale Active Shape Description. Scale-Space Julia A. Schnabel, Simon R. Arridge
1997	—	`conf`	Multi-Spectral Probabilistic Diffusion Using Bayesian Classification. Scale-Space Simon R. Arridge, Andrew Simmons
1997	—	`conf`	Optimal Data Types in Optical Tomography. IPMI Martin Schweiger, Simon R. Arridge
1995	A	`conf`	Active Contour Models for Shape Description using Multiscale Differential Invariants. BMVC Julia A. Schnabel, Simon R. Arridge
1993	J	`jnl`	Application of the finite-element method for the forward and inverse models in optical tomography. J. Math. Imaging Vis. Martin Schweiger, Simon R. Arridge, David T. Delpy
1993	—	`conf`	Inverse Methods for Optical Tomography. IPMI Simon R. Arridge, Martin Schweiger