Simon Olsson

16 papers A* 3A 1Journal 11Unranked 1
YearRankTypeTitle / Venue / Authors
2026 J jnl
Protein Language Model Embeddings Improve Generalization of Implicit Transfer Operators.
CoRR
Panagiotis Antoniadis, Beatrice Pavesi, Simon Olsson, Ole Winther
2025 A* conf
Boltzmann priors for Implicit Transfer Operators.
ICLR
Juan Viguera Diez, Mathias Jacob Schreiner, Ola Engkvist, Simon Olsson
2025 A* conf
Compositional Flows for 3D Molecule and Synthesis Pathway Co-design.
ICML
Tony Shen, Seonghwan Seo, Ross Irwin, Kieran Didi, Simon Olsson, Woo Youn Kim, Martin Ester
2025 J jnl
Compositional Flows for 3D Molecule and Synthesis Pathway Co-design.
CoRR
Tony Shen, Seonghwan Seo, Ross Irwin, Kieran Didi, Simon Olsson, Woo Youn Kim, Martin Ester
2025 J jnl
Consistent Projection of Langevin Dynamics: Preserving Thermodynamics and Kinetics in Coarse-Grained Models.
CoRR
Vahid Nateghi, Lara Neureither, Selma Moqvist, Carsten Hartmann, Simon Olsson, Feliks Nüske
2025 J jnl
FLOWR: Flow Matching for Structure-Aware De Novo, Interaction- and Fragment-Based Ligand Generation.
CoRR
Julian Cremer, Ross Irwin, Alessandro Tibo, Jon Paul Janet, Simon Olsson, Djork-Arné Clevert
2025 J jnl
HollowFlow: Efficient Sample Likelihood Evaluation using Hollow Message Passing.
CoRR
Johann Flemming Gloy, Simon Olsson
2025 J jnl
Minimum-Excess-Work Guidance.
CoRR
Christopher Kolloff, Tobias Höppe, Emmanouil Angelis, Mathias Jacob Schreiner, Stefan Bauer, Andrea Dittadi, Simon Olsson
2025 A conf
SemlaFlow - Efficient 3D Molecular Generation with Latent Attention and Equivariant Flow Matching.
AISTATS
Ross Irwin, Alessandro Tibo, Jon Paul Janet, Simon Olsson
2024 J jnl
Efficient 3D Molecular Generation with Flow Matching and Scale Optimal Transport.
CoRR
Ross Irwin, Alessandro Tibo, Jon Paul Janet, Simon Olsson
2024 J jnl
Generation of conformational ensembles of small molecules via surrogate model-assisted molecular dynamics.
Mach. Learn. Sci. Technol.
Juan Viguera Diez, Sara Romeo Atance, Ola Engkvist, Simon Olsson
2023 J jnl
Exploring local effects of economic activities using agent-based ecosystem models.
CoRR
Claes Strannegård, Niklas Engsner, Rasmus Lindgren, Simon Olsson, John A. Endler
2023 A* conf
Implicit Transfer Operator Learning: Multiple Time-Resolution Models for Molecular Dynamics.
NeurIPS
Mathias Schreiner, Ole Winther, Simon Olsson
2023 J jnl
Rescuing off-equilibrium simulation data through dynamic experimental data with dynAMMo.
Mach. Learn. Sci. Technol.
Christopher Kolloff, Simon Olsson
2022 — conf
Ecosystem Models Based on Artificial Intelligence.
SAIS
Claes Strannegård, Niklas Engsner, Jesper Eisfeldt, John A. Endler, Amanda Hansson, Rasmus Lindgren, Petter Mostad, Simon Olsson, Irene Perini, Heather Reese, Fulya Taylan, Simon Ulfsbäcker, Ann Nordgren
2013 J jnl
PHAISTOS: A framework for Markov chain Monte Carlo simulation and inference of protein structure.
J. Comput. Chem.
Wouter Boomsma, Jes Frellsen, Tim Harder, Sandro Bottaro, Kristoffer E. Johansson, Pengfei Tian, Kasper Stovgaard, Christian Andreetta, Simon Olsson, Jan B. Valentin, Lubomir D. Antonov, Anders S. Christensen, Mikael Borg, Jan H. Jensen, Kresten Lindorff-Larsen, Jesper Ferkinghoff-Borg, Thomas Hamelryck