Shura Hayryan

11 papers Misc 1Journal 10
YearRankTypeTitle / Venue / Authors
2020 J jnl
PBCAVE: Program for exact classification of the mesh points of a protein with possible internal cavities and its application to Poisson-Boltzmann equation solution.
Comput. Phys. Commun.
Ján Busa Jr., Ján Busa, Edik A. Ayryan, Shura Hayryan, Chin-Kun Hu, Imrich Pokorný, Jaroslav Skrivánek
2015 J jnl
CAVE-CL: An OpenCL version of the package for detection and quantitative analysis of internal cavities in a system of overlapping balls: Application to proteins.
Comput. Phys. Commun.
Ján Busa Jr., Ján Busa, Shura Hayryan, Chin-Kun Hu, Ming-Chya Wu
2012 J jnl
ARVO-CL: The OpenCL version of the ARVO package - An efficient tool for computing the accessible surface area and the excluded volume of proteins via analytical equations.
Comput. Phys. Commun.
Ján Busa Jr., Shura Hayryan, Ming-Chya Wu, Ján Busa, Chin-Kun Hu
2010 J jnl
CAVE: A package for detection and quantitative analysis of internal cavities in a system of overlapping balls: Application to proteins.
Comput. Phys. Commun.
Ján Busa, Shura Hayryan, Chin-Kun Hu, Jaroslav Skrivánek, Ming-Chya Wu
2009 J jnl
Enveloping triangulation method for detecting internal cavities in proteins and algorithm for computing their surface areas and volumes.
J. Comput. Chem.
Ján Busa, Shura Hayryan, Chin-Kun Hu, Jaroslav Skrivánek, Ming-Chya Wu
2007 J jnl
Efficient combination of Wang-Landau and transition matrix Monte Carlo methods for protein simulations.
J. Comput. Chem.
Ruben Ghulghazaryan, Shura Hayryan, Chin-Kun Hu
2006 J jnl
An enhanced version of SMMP - open-source software package for simulation of proteins.
Comput. Phys. Commun.
Frank Eisenmenger, Ulrich H. E. Hansmann, Shura Hayryan, Chin-Kun Hu
2005 J jnl
A new analytical method for computing solvent-accessible surface area of macromolecules and its gradients.
J. Comput. Chem.
Shura Hayryan, Chin-Kun Hu, Jaroslav Skrivánek, Edik Hayryan, Imrich Pokorný
2005 J jnl
ARVO: A Fortran package for computing the solvent accessible surface area and the excluded volume of overlapping spheres via analytic equations.
Comput. Phys. Commun.
Ján Busa, Jozef Dzurina, Edik Hayryan, Shura Hayryan, Chin-Kun Hu, Ján Plávka, Imrich Pokorný, Jaroslav Skrivánek, Ming-Chya Wu
2003 Misc conf
Parallel Solution of the Poisson-Boltzmann Equation for Proteins.
International Conference on Computational Science
Shura Hayryan, Chin-Kun Hu, Edik Hayryan, Imrich Pokorný
2001 J jnl
Multicanonical parallel simulations of proteins with continuous potentials.
J. Comput. Chem.
Shura Hayryan, Chin-Kun Hu, Shun-Yun Hu, Rung-Ji Shang