Shuangge Ma - RankMe

86 papers Misc 1Journal 85

Year	Rank	Type	Title / Venue / Authors
2026	J	`jnl`	Conditional Graphical Models With A Hierarchical Sparse Estimation. Stat. Comput. Rong Li, Qingzhao Zhang, Shuangge Ma
2026	J	`jnl`	Hierarchical structure-guided high-dimensional multi-view clustering. J. Multivar. Anal. Jiajia Jiang, Kuangnan Fang, Shuangge Ma, Qingzhao Zhang
2026	J	`jnl`	Sparse Bayesian Deep Functional Learning with Structured Region Selection. CoRR Xiaoxian Zhu, Yingmeng Li, Shuangge Ma, Mengyun Wu
2025	J	`jnl`	ContinualFlow: Learning and Unlearning with Neural Flow Matching. CoRR Lorenzo Simone, Davide Bacciu, Shuangge Ma
2025	J	`jnl`	Federated Online Learning for Heterogeneous Multisource Streaming Data. CoRR Jingmao Li, Yuanxing Chen, Shuangge Ma, Kuangnan Fang
2025	J	`jnl`	GE-IA-NAM: gene-environment interaction analysis via imaging-assisted neural additive model. Bioinform. Jingmao Li, Yaqing Xu, Shuangge Ma, Kuangnan Fang
2025	J	`jnl`	Joint modeling of mixed outcomes using a rank-based sparse neural network. J. Biomed. Informatics Jiajing Xue, Yaqing Xu, Jingmao Li, Shuangge Ma, Kuangnan Fang
2025	J	`jnl`	Local Clustering for Functional Data. J. Comput. Graph. Stat. Yuanxing Chen, Qingzhao Zhang, Shuangge Ma
2025	J	`jnl`	Subgroup Analysis of Differential Networks with Latent Variables. Stat. Comput. Linxi Li, Shuangge Ma, Qingzhao Zhang
2024	J	`jnl`	A penalized integrative deep neural network for variable selection among multiple omics datasets. Quant. Biol. Yang Li, Xiaonan Ren, Haochen Yu, Tao Sun, Shuangge Ma
2024	J	`jnl`	Editorial. Briefings Bioinform. Shuangge Ma
2024	J	`jnl`	Estimation of multiple networks with common structures in heterogeneous subgroups. J. Multivar. Anal. Xing Qin, Jianhua Hu, Shuangge Ma, Mengyun Wu
2024	J	`jnl`	Heterogeneity-aware Clustered Distributed Learning for Multi-source Data Analysis. J. Mach. Learn. Res. Yuanxing Chen, Qingzhao Zhang, Shuangge Ma, Kuangnan Fang
2024	J	`jnl`	Hierarchical false discovery rate control for high-dimensional survival analysis with interactions. Comput. Stat. Data Anal. Weijuan Liang, Qingzhao Zhang, Shuangge Ma
2024	J	`jnl`	Penalized Generative Variable Selection. CoRR Tong Wang, Jian Huang, Shuangge Ma
2024	J	`jnl`	Prediction Consistency Regularization for Learning with Noise Labels Based on Contrastive Clustering. Entropy XinKai Sun, Sanguo Zhang, Shuangge Ma
2023	J	`jnl`	2 Comput. Stat. Data Anal. Shuangge Ma, Martina Mittlböck, F. Javier Rubio, Catherine C. Liu
2023	J	`jnl`	A General Framework for Identifying Hierarchical Interactions and Its Application to Genomics Data. J. Comput. Graph. Stat. Xiao Zhang, Xingjie Shi, Yiming Liu, Xu Liu, Shuangge Ma
2023	J	`jnl`	Aligned deep neural network for integrative analysis with high-dimensional input. J. Biomed. Informatics Shunqin Zhang, Sanguo Zhang, Huangdi Yi, Shuangge Ma
2023	J	`jnl`	Editorial. Briefings Bioinform. Shuangge Ma
2023	J	`jnl`	FunctanSNP: an R package for functional analysis of dense SNP data (with interactions). Bioinform. Rui Ren, Kuangnan Fang, Qingzhao Zhang, Shuangge Ma
2023	J	`jnl`	Hierarchy-assisted gene expression regulatory network analysis. Stat. Anal. Data Min. Han Yan, Sanguo Zhang, Shuangge Ma
2023	J	`jnl`	Locally sparse quantile estimation for a partially functional interaction model. Comput. Stat. Data Anal. Weijuan Liang, Qingzhao Zhang, Shuangge Ma
2023	J	`jnl`	Prior information-assisted integrative analysis of multiple datasets. Bioinform. Feifei Wang, Dongzuo Liang, Yang Li, Shuangge Ma
2023	J	`jnl`	Spatio-temporally smoothed deep survival neural network. J. Biomed. Informatics Yang Li, Dongzuo Liang, Shuangge Ma, Chenjin Ma
2023	J	`jnl`	The Bayesian regularized quantile varying coefficient model. Comput. Stat. Data Anal. Fei Zhou, Jie Ren, Shuangge Ma, Cen Wu
2023	J	`jnl`	Unified model-free interaction screening via CV-entropy filter. Comput. Stat. Data Anal. Wei Xiong, Yaxian Chen, Shuangge Ma
2022	J	`jnl`	A Linguistic Analysis of News Coverage of E-Healthcare in China with a Heterogeneous Graphical Model. Entropy Mengque Liu, Xinyan Fan, Shuangge Ma
2022	J	`jnl`	A generalized Wilcoxon-Mann-Whitney type test for multivariate data through pairwise distance. J. Multivar. Anal. Jiamin Liu, Shuangge Ma, Wangli Xu, Liping Zhu
2022	J	`jnl`	A tree-based gene-environment interaction analysis with rare features. Stat. Anal. Data Min. Mengque Liu, Qingzhao Zhang, Shuangge Ma
2022	J	`jnl`	Analysis of cancer omics data: a selective review of statistical techniques. Briefings Bioinform. Chenjin Ma, Mengyun Wu, Shuangge Ma
2022	J	`jnl`	Biclustering analysis of functionals via penalized fusion. J. Multivar. Anal. Kuangnan Fang, Yuanxing Chen, Shuangge Ma, Qingzhao Zhang
2022	J	`jnl`	Comparative Analysis of Social Support in Online Health Communities Using a Word Co-Occurrence Network Analysis Approach. Entropy Mengque Liu, Xia Zou, Jiyin Chen, Shuangge Ma
2022	J	`jnl`	Default risk prediction and feature extraction using a penalized deep neural network. Stat. Comput. Cunjie Lin, Nan Qiao, Wenli Zhang, Yang Li, Shuangge Ma
2022	J	`jnl`	GEInfo: an R package for gene-environment interaction analysis incorporating prior information. Bioinform. Xiaoyan Wang, Hongduo Liu, Shuangge Ma
2022	J	`jnl`	Network-based cancer heterogeneity analysis incorporating multi-view of prior information. Bioinform. Yang Li, Shaodong Xu, Shuangge Ma, Mengyun Wu
2022	J	`jnl`	Replicability in cancer omics data analysis: measures and empirical explorations. Briefings Bioinform. Jiping Wang, Hongmin Liang, Qingzhao Zhang, Shuangge Ma
2022	J	`jnl`	Subgroup analysis for high-dimensional functional regression. J. Multivar. Anal. Xiaochen Zhang, Qingzhao Zhang, Shuangge Ma, Kuangnan Fang
2022	J	`jnl`	iSFun: an R package for integrative dimension reduction analysis. Bioinform. Kuangnan Fang, Rui Ren, Qingzhao Zhang, Shuangge Ma
2021	J	`jnl`	An association test for functional data based on Kendall's Tau. J. Multivar. Anal. Sneha Jadhav, Shuangge Ma
2021	J	`jnl`	Conditional score matching for high-dimensional partial graphical models. Comput. Stat. Data Anal. Xinyan Fan, Qingzhao Zhang, Shuangge Ma, Kuangnan Fang
2021	J	`jnl`	DReSS: a method to quantitatively describe the influence of structural perturbations on state spaces of genetic regulatory networks. Briefings Bioinform. Ziqiao Yin, Binghui Guo, Shuangge Ma, Yifan Sun, Zhilong Mi, Zhiming Zheng
2021	J	`jnl`	GEInter: an R package for robust gene-environment interaction analysis. Bioinform. Mengyun Wu, Xing Qin, Shuangge Ma
2021	J	`jnl`	HeteroGGM: an R package for Gaussian graphical model-based heterogeneity analysis. Bioinform. Mingyang Ren, Sanguo Zhang, Qingzhao Zhang, Shuangge Ma
2021	J	`jnl`	Marginal false discovery rate for a penalized transformation survival model. Comput. Stat. Data Anal. Weijuan Liang, Shuangge Ma, Cunjie Lin
2021	J	`jnl`	Promote sign consistency in the joint estimation of precision matrices. Comput. Stat. Data Anal. Qingzhao Zhang, Shuangge Ma, Yuan Huang
2021	J	`jnl`	Vertical integration methods for gene expression data analysis. Briefings Bioinform. Mengyun Wu, Huangdi Yi, Shuangge Ma
2020	J	`jnl`	Evaluation of Survival Outcomes of Endovascular Versus Open Aortic Repair for Abdominal Aortic Aneurysms with a Big Data Approach. Entropy Hao Mei, Yaqing Xu, Jiping Wang, Shuangge Ma
2020	J	`jnl`	NCutYX: a package for clustering analysis of multilayer omics data. Bioinform. Sebastian J. Teran Hidalgo, Mengyun Wu, Shuangge Ma
2020	J	`jnl`	Structured analysis of the high-dimensional FMR model. Comput. Stat. Data Anal. Mengque Liu, Qingzhao Zhang, Kuangnan Fang, Shuangge Ma
2019	J	`jnl`	A modified mean-variance feature-screening procedure for ultrahigh-dimensional discriminant analysis. Comput. Stat. Data Anal. Shengmei He, Shuangge Ma, Wangli Xu
2019	J	`jnl`	Robust genetic interaction analysis. Briefings Bioinform. Mengyun Wu, Shuangge Ma
2018	J	`jnl`	A Forward and Backward Stagewise algorithm for nonconvex loss functions with adaptive Lasso. Comput. Stat. Data Anal. Xingjie Shi, Yuan Huang, Jian Huang, Shuangge Ma
2018	J	`jnl`	Integrative sparse principal component analysis. J. Multivar. Anal. Kuangnan Fang, Xinyan Fan, Qingzhao Zhang, Shuangge Ma
2018	J	`jnl`	Robust network-based analysis of the associations between (epi)genetic measurements. J. Multivar. Anal. Cen Wu, Qingzhao Zhang, Yu Jiang, Shuangge Ma
2017	J	`jnl`	Accounting for clinical covariates and interactions in ranking genomic markers using ROC. Commun. Stat. Simul. Comput. Tao Yu, Jialiang Li, Shuangge Ma
2016	J	`jnl`	EPS: an empirical Bayes approach to integrating pleiotropy and tissue-specific information for prioritizing risk genes. Bioinform. Jin Liu, Xiang Wan, Shuangge Ma, Can Yang
2016	J	`jnl`	Group-combined Bioinform. Xiaonan Hu, Wei Zhang, Sanguo Zhang, Shuangge Ma, Qizhai Li
2016	J	`jnl`	Grouped Variable Selection Using Area under the ROC with Imbalanced Data. Commun. Stat. Simul. Comput. Yang Li, Yichen Qin, Limin Wang, Jiaxu Chen, Shuangge Ma
2016	J	`jnl`	Identification of proportionality structure with two-part models using penalization. Comput. Stat. Data Anal. Kuangnan Fang, Xiaoyan Wang, Ben-Chang Shia, Shuangge Ma
2016	J	`jnl`	Lasso Regression Based on Empirical Mode Decomposition. Commun. Stat. Simul. Comput. Lei Qin, Shuangge Ma, Jung-Chen Lin, Ben-Chang Shia
2015	J	`jnl`	A selective review of robust variable selection with applications in bioinformatics. Briefings Bioinform. Cen Wu, Shuangge Ma
2015	J	`jnl`	Combining multidimensional genomic measurements for predicting cancer prognosis: observations from TCGA. Briefings Bioinform. Qing Zhao, Xingjie Shi, Yang Xie, Jian Huang, Ben-Chang Shia, Shuangge Ma
2015	J	`jnl`	Deciphering the associations between gene expression and copy number alteration using a sparse double Laplacian shrinkage approach. Bioinform. Xingjie Shi, Qing Zhao, Jian Huang, Yang Xie, Shuangge Ma
2015	J	`jnl`	Measures for the degree of overlap of gene signatures and applications to TCGA. Briefings Bioinform. Xingjie Shi, Huangdi Yi, Shuangge Ma
2014	J	`jnl`	Similarity of markers identified from cancer gene expression studies: observations from GEO. Briefings Bioinform. Xingjie Shi, Shihao Shen, Jin Liu, Jian Huang, Yong Zhou, Shuangge Ma
2012	J	`jnl`	Adjusting confounders in ranking biomarkers: a model-based ROC approach. Briefings Bioinform. Tao Yu, Jialiang Li, Shuangge Ma
2012	J	`jnl`	Identification of breast cancer prognosis markers via integrative analysis. Comput. Stat. Data Anal. Shuangge Ma, Ying Dai, Jian Huang, Yang Xie
2012	J	`jnl`	Integrative prescreening in analysis of multiple cancer genomic studies. BMC Bioinform. Rui Song, Jian Huang, Shuangge Ma
2011	J	`jnl`	Fuzzy Canonical Discriminant Analysis: Theory and Practice. Commun. Stat. Simul. Comput. Ben-Chang Shia, Jianping Zhu, Kuangnan Fang, Shuangge Ma
2011	J	`jnl`	Principal component analysis based methods in bioinformatics studies. Briefings Bioinform. Shuangge Ma, Ying Dai
2011	J	`jnl`	Ranking prognosis markers in cancer genomic studies. Briefings Bioinform. Shuangge Ma, Xiao Song
2010	J	`jnl`	Detection of gene pathways with predictive power for breast cancer prognosis. BMC Bioinform. Shuangge Ma, Michael R. Kosorok
2010	J	`jnl`	Identification of non-Hodgkin's lymphoma prognosis signatures using the CTGDR method. Bioinform. Shuangge Ma, Yawei Zhang, Jian Huang, Xuesong Han, Theodore Holford, Qing Lan, Nathaniel Rothman, Peter Boyle, Tongzhang Zheng
2010	J	`jnl`	Incorporating gene co-expression network in identification of cancer prognosis markers. BMC Bioinform. Shuangge Ma, Mingyu Shi, Yang Li, Danhui Yi, Ben-Chang Shia
2010	J	`jnl`	Semiparametric prognosis models in genomic studies. Briefings Bioinform. Shuangge Ma, Jian Huang, Mingyu Shi, Yang Li, Ben-Chang Shia
2009	Misc	`conf`	Enriching PubMed Related Article Search with Sentence Level Co-citations. AMIA Nam Tran, Pedro Alves, Shuangge Ma, Michael Krauthammer
2009	J	`jnl`	Identification of differential gene pathways with principal component analysis. Bioinform. Shuangge Ma, Michael R. Kosorok
2009	J	`jnl`	Regularized gene selection in cancer microarray meta-analysis. BMC Bioinform. Shuangge Ma, Jian Huang
2008	J	`jnl`	Penalized feature selection and classification in bioinformatics. Briefings Bioinform. Shuangge Ma, Jian Huang
2007	J	`jnl`	Additive risk survival model with microarray data. BMC Bioinform. Shuangge Ma, Jian Huang
2007	J	`jnl`	Clustering threshold gradient descent regularization: with applications to microarray studies. Bioinform. Shuangge Ma, Jian Huang
2007	J	`jnl`	Supervised group Lasso with applications to microarray data analysis. BMC Bioinform. Shuangge Ma, Xiao Song, Jian Huang
2006	J	`jnl`	Empirical study of supervised gene screening. BMC Bioinform. Shuangge Ma
2006	J	`jnl`	Regularized binormal ROC method in disease classificationusing microarray data. BMC Bioinform. Shuangge Ma, Xiao Song, Jian Huang
2005	J	`jnl`	Regularized ROC method for disease classification and biomarker selection with microarray data. Bioinform. Shuangge Ma, Jian Huang