Shu-Dong Zhang

12 papers Journal 10Unranked 2
YearRankTypeTitle / Venue / Authors
2018 J jnl
A review of connectivity map and computational approaches in pharmacogenomics.
Briefings Bioinform.
Aliyu Musa, Laleh Soltan Ghoraie, Shu-Dong Zhang, Galina V. Glazko, Olli Yli-Harja, Matthias Dehmer, Benjamin Haibe-Kains, Frank Emmert-Streib
2017 J jnl
A review of connectivity map and computational approaches in pharmacogenomics.
Briefings Bioinform.
Aliyu Musa, Laleh Soltan Ghoraie, Shu-Dong Zhang, Galina V. Glazko, Olli Yli-Harja, Matthias Dehmer, Benjamin Haibe-Kains, Frank Emmert-Streib
2017 J jnl
An integrated meta-analysis approach to identifying medications with potential to alter breast cancer risk through connectivity mapping.
BMC Bioinform.
Gayathri Thillaiyampalam, Fabio Liberante, Liam Murray, Chris Cardwell, Ken I. Mills, Shu-Dong Zhang
2016 J jnl
A gene-signature progression approach to identifying candidate small-molecule cancer therapeutics with connectivity mapping.
BMC Bioinform.
Qing Wen, Chang Sik Kim, Peter Hamilton, Shu-Dong Zhang
2016 J jnl
QUADrATiC: scalable gene expression connectivity mapping for repurposing FDA-approved therapeutics.
BMC Bioinform.
Paul G. O'Reilly, Qing Wen, Peter Bankhead, Philip D. Dunne, Darragh G. McArt, Suzanne McPherson, Peter Hamilton, Ken I. Mills, Shu-Dong Zhang
2014 — conf
Integrative analysis of chemo-transcriptomic profiles for drug-feature specific gene expression signatures.
BIBM
Chang Sik Kim, Qing Wen, Shu-Dong Zhang
2014 — conf
RMA with quantile normalization mixes biological signals between different sample groups in microarray data analysis.
BIBM
Chang Sik Kim, Seungwoo Hwang, Shu-Dong Zhang
2013 J jnl
cudaMap: a GPU accelerated program for gene expression connectivity mapping.
BMC Bioinform.
Darragh G. McArt, Peter Bankhead, Philip D. Dunne, Manuel Salto-Tellez, Peter Hamilton, Shu-Dong Zhang
2009 J jnl
sscMap: An extensible Java application for connecting small-molecule drugs using gene-expression signatures.
BMC Bioinform.
Shu-Dong Zhang, Timothy W. Gant
2008 J jnl
A simple and robust method for connecting small-molecule drugs using gene-expression signatures.
BMC Bioinform.
Shu-Dong Zhang, Timothy W. Gant
2005 J jnl
Effect of pooling samples on the efficiency of comparative studies using microarrays.
Bioinform.
Shu-Dong Zhang, Timothy W. Gant
2004 J jnl
A statistical framework for the design of microarray experiments and effective detection of differential gene expression.
Bioinform.
Shu-Dong Zhang, Timothy W. Gant