Shili Lin

31 papers B 1Journal 29Unranked 1
YearRankTypeTitle / Venue / Authors
2026 J jnl
A Common-Ground Structure Switched-Capacitor Multilevel Inverter With Low-DC Bias Characteristics.
Int. J. Circuit Theory Appl.
Kejiang Liu, Zejia Lin, Xianyong Zhang, Shili Lin, Li Li
2025 J jnl
scHiCSRS: a self-representation smoothing method with Gaussian mixture model for imputing single cell Hi-C data.
BMC Bioinform.
Qing Xie, Wang Meng, Shili Lin
2024 J jnl
Hybrid energy storage system and its hardware-in-loop platform for 1500-V metro DC power supply system based on voltage droop control.
Int. J. Circuit Theory Appl.
Shili Lin, Cheng Chen, Gaoju Liang, Xianyong Zhang, Sheng Li
2022 J jnl
HiCImpute: A Bayesian hierarchical model for identifying structural zeros and enhancing single cell Hi-C data.
PLoS Comput. Biol.
Qing Xie, Chenggong Han, Victor Jin, Shili Lin
2021 J jnl
A Novel Pigeon-Inspired Optimized RBF Model for Parallel Battery Branch Forecasting.
Complex.
Yanhui Zhang, Shili Lin, Haiping Ma, Yuanjun Guo, Wei Feng
2021 J jnl
Are dropout imputation methods for scRNA-seq effective for scHi-C data?
Briefings Bioinform.
Chenggong Han, Qing Xie, Shili Lin
2019 J jnl
Evaluation and comparison of methods for recapitulation of 3D spatial chromatin structures.
Briefings Bioinform.
Jincheol Park, Shili Lin
2017 J jnl
Investigation on dynamic equalisation performance of lithium battery pack management.
IET Circuits Devices Syst.
Jie Lv, Wenji Song, Shili Lin, Ziping Feng, Yulong Ding, Yongliang Li
2016 J jnl
Impact of data resolution on three-dimensional structure inference methods.
BMC Bioinform.
Jincheol Park, Shili Lin
2016 J jnl
Sparse Inverse Covariance Estimation with
J. Comput. Biol.
Zhenqiu Liu, Shili Lin, Nan Deng, Dermot P. B. McGovern, Steven T. Piantadosi
2016 J jnl
Statistical methods for detecting differentially methylated regions based on MethylCap-seq data.
Briefings Bioinform.
Deepak Nag Ayyala, David E. Frankhouser, Javkhlan-Ochir Ganbat, Guido Marcucci, Ralf Bundschuh, Pearlly Yan, Shili Lin
2015 J jnl
Detecting associations of rare variants with common diseases: collapsing or haplotyping?
Briefings Bioinform.
Meng Wang, Shili Lin
2015 J jnl
GrammR: graphical representation and modeling of count data with application in metagenomics.
Bioinform.
Deepak Nag Ayyala, Shili Lin
2015 J jnl
Network construction and structure detection with metagenomic count data.
BioData Min.
Zhenqiu Liu, Shili Lin, Steven T. Piantadosi
2014 J jnl
A Mixture Modeling Framework for Differential Analysis of High-Throughput Data.
Comput. Math. Methods Medicine
Cenny Taslim, Shili Lin
2014 J jnl
FamLBL: detecting rare haplotype disease association based on common SNPs using case-parent triads.
Bioinform.
Meng Wang, Shili Lin
2014 J jnl
PrEMeR-CG: inferring nucleotide level DNA methylation values from MethylCap-seq data.
Bioinform.
David E. Frankhouser, Mark Murphy, James S. Blachly, Jincheol Park, Mike W. Zoller, Javkhlan-Ochir Ganbat, John Curfman, John C. Byrd, Shili Lin, Guido Marcucci, Pearlly Yan, Ralf Bundschuh
2011 — conf
Chromatin signature analysis and prediction of genome-wide novel promoters using finite mixture model.
GENSiPS
Cenny Taslim, Shili Lin, Kun Huang, Tim Hui-Ming Huang
2011 J jnl
DIME: R-package for identifying differential ChIP-seq based on an ensemble of mixture models.
Bioinform.
Cenny Taslim, Tim Hui-Ming Huang, Shili Lin
2011 J jnl
Identifying hypermethylated CpG islands using a quantile regression model.
BMC Bioinform.
Shuying Sun, Zhengyi Chen, Pearlly Yan, Yi-Wen Huang, Tim Hui-Ming Huang, Shili Lin
2011 J jnl
Preprocessing differential methylation hybridization microarray data.
BioData Min.
Shuying Sun, Yi-Wen Huang, Pearlly Yan, Tim Hui-Ming Huang, Shili Lin
2010 J jnl
Sparse Support Vector Machines with L_{p} Penalty for Biomarker Identification.
IEEE ACM Trans. Comput. Biol. Bioinform.
Zhenqiu Liu, Shili Lin, Ming Tan
2009 J jnl
A robust unified approach to analyzing methylation and gene expression data.
Comput. Stat. Data Anal.
Abbas Khalili, Tim Hui-Ming Huang, Shili Lin
2009 J jnl
Comparative study on ChIP-seq data: normalization and binding pattern characterization.
Bioinform.
Cenny Taslim, Jiejun Wu, Pearlly Yan, Greg Singer, Jeffrey D. Parvin, Tim Hui-Ming Huang, Shili Lin, Kun Huang
2009 J jnl
Identifying differentially methylated genes using mixed effect and generalized least square models.
BMC Bioinform.
Shuying Sun, Pearlly Yan, Tim Hui-Ming Huang, Shili Lin
2008 J jnl
Probe signal correction for differential methylation hybridization experiments.
BMC Bioinform.
Dustin P. Potter, Pearlly Yan, Tim Hui-Ming Huang, Shili Lin
2007 J jnl
Heritable clustering and pathway discovery in breast cancer integrating epigenetic and phenotypic data.
BMC Bioinform.
Zailong Wang, Pearlly Yan, Dustin P. Potter, Charis Eng, Tim Hui-Ming Huang, Shili Lin
2006 J jnl
Genome-Wide Tagging SNPs with Entropy-Based Monte Carlo Method.
J. Comput. Biol.
Zhenqiu Liu, Shili Lin, Ming Tan
2004 J jnl
Class discovery and classification of tumor samples using mixture modeling of gene expression data - a unified approach.
Bioinform.
Roxana Alexandridis, Shili Lin, Mark Irwin
1997 J jnl
An Algorithm for Haplotype Analysis.
J. Comput. Biol.
Shili Lin, Terence P. Speed
1997 B conf
An algorithm for haplotype analysis.
RECOMB
Shili Lin, Terence P. Speed