Shigenori Tanaka

32 papers C 1Journal 22Unranked 9

Year	Rank	Type	Title / Venue / Authors
2024	J	`jnl`	Navigating Ultralarge Virtual Chemical Spaces with Product-of-Experts Chemical Language Models. J. Chem. Inf. Model. Shuya Nakata, Yoshiharu Mori, Shigenori Tanaka
2024	J	`jnl`	Non-Equilibrium Quantum Brain Dynamics: Water Coupled with Phonons and Photons. Entropy Akihiro Nishiyama, Shigenori Tanaka, Jack Adam Tuszynski
2024	J	`jnl`	Quantum Brain Dynamics and Virtual Reality. Biosyst. Akihiro Nishiyama, Shigenori Tanaka, Jack Adam Tuszynski
2023	J	`jnl`	End-to-end protein-ligand complex structure generation with diffusion-based generative models. BMC Bioinform. Shuya Nakata, Yoshiharu Mori, Shigenori Tanaka
2023	J	`jnl`	Thermal conductivity and conductance of protein in aqueous solution: Effects of geometrical shape. J. Comput. Chem. Ikuo Kurisaki, Seiya Tanaka, Ichiro Mori, Toshihito Umegaki, Yoshiharu Mori, Shigenori Tanaka
2022	J	`jnl`	Protein-ligand binding affinity prediction of cyclin-dependent kinase-2 inhibitors by dynamically averaged fragment molecular orbital-based interaction energy. J. Comput. Chem. Kenichiro Takaba, Chiduru Watanabe, Atsushi Tokuhisa, Yoshinobu Akinaga, Biao Ma, Ryo Kanada, Mitsugu Araki, Yasushi Okuno, Yusuke Kawashima, Hirotomo Moriwaki, Norihito Kawashita, Teruki Honma, Kaori Fukuzawa, Shigenori Tanaka
2021	J	`jnl`	FMODB: The World's First Database of Quantum Mechanical Calculations for Biomacromolecules Based on the Fragment Molecular Orbital Method. J. Chem. Inf. Model. Daisuke Takaya, Chiduru Watanabe, Shunpei Nagase, Kikuko Kamisaka, Yoshio Okiyama, Hirotomo Moriwaki, Hitomi Yuki, Tomohiro Sato, Noriyuki Kurita, Yoichiro Yagi, Tatsuya Takagi, Norihito Kawashita, Kenichiro Takaba, Tomonaga Ozawa, Midori Takimoto-Kamimura, Shigenori Tanaka, Kaori Fukuzawa, Teruki Honma
2021	J	`jnl`	In silico modeling of PAX8-PPARγ fusion protein in thyroid carcinoma: influence of structural perturbation by fusion on ligand-binding affinity. J. Comput. Aided Mol. Des. Kaori Sakaguchi, Yoshio Okiyama, Shigenori Tanaka
2021	J	`jnl`	Research on Identification of Road Features from Point Cloud Data Using Deep Learning. Int. J. Autom. Technol. Yoshimasa Umehara, Yoshinori Tsukada, Kenji Nakamura, Shigenori Tanaka, Koki Nakahata
2020	J	`jnl`	Fragment Molecular Orbital Based Interaction Analyses on COVID-19 Main Protease - Inhibitor N3 Complex (PDB ID: 6LU7). J. Chem. Inf. Model. Ryo Hatada, Koji Okuwaki, Yuji Mochizuki, Yuma Handa, Kaori Fukuzawa, Yuto Komeiji, Yoshio Okiyama, Shigenori Tanaka
2020	J	`jnl`	Non-Equilibrium Quantum Electrodynamics in Open Systems as a Realizable Representation of Quantum Field Theory of the Brain. Entropy Akihiro Nishiyama, Shigenori Tanaka, Jack Adam Tuszynski
2019	J	`jnl`	Ab initio molecular dynamics study of prebiotic production processes of organic compounds at meteorite impacts on ocean. J. Comput. Chem. Kohei Shimamura, Fuyuki Shimojo, Aiichiro Nakano, Shigenori Tanaka
2019	J	`jnl`	Non-Equilibrium Quantum Brain Dynamics: Super-Radiance and Equilibration in 21 Dimensions+. Entropy Akihiro Nishiyama, Shigenori Tanaka, Jack Adam Tuszynski
2017	J	`jnl`	Cosolvent-Based Molecular Dynamics for Ensemble Docking: Practical Method for Generating Druggable Protein Conformations. J. Chem. Inf. Model. Shota Uehara, Shigenori Tanaka
2017	J	`jnl`	Theoretical Analysis of Activity Cliffs among Benzofuranone-Class Pim1 Inhibitors Using the Fragment Molecular Orbital Method with Molecular Mechanics Poisson-Boltzmann Surface Area (FMO+MM-PBSA) Approach. J. Chem. Inf. Model. Chiduru Watanabe, Hirofumi Watanabe, Kaori Fukuzawa, Lorien J. Parker, Yoshio Okiyama, Hitomi Yuki, Shigeyuki Yokoyama, Hirofumi Nakano, Shigenori Tanaka, Teruki Honma
2014	J	`jnl`	Hierarchical coarse-graining model for photosystem II including electron and excitation-energy transfer processes. Biosyst. Takeshi Matsuoka, Shigenori Tanaka, Kuniyoshi Ebina
2013	—	`conf`	Research on Estimation of Relative Position and Construction of Three-Dimensional Space Using Range Image Sensor. TAAI Yoshinori Tsukada, Etsuji Kitagawa, Shigenori Tanaka, Satoshi Abiko, Yuki Fukushima
2012	—	`conf`	Detection Method of Blog Spam Based on Categorization and Time Series Information. AINA Workshops Toshio Teraguchi, Kenji Nakamura, Shigenori Tanaka, Koichi Kitano
2012	—	`conf`	Measurement of people using range image sensor. SCIS&ISIS Satoshi Abiko, Shigenori Tanaka, Shinichi Muramoto, Katsuma Wakabayashi, Kohei Uetani
2012	—	`conf`	Method to construct conceptual graph with technical term dictionary for schema matching. SCIS&ISIS Koichi Kitano, Kenji Nakamura, Shigenori Tanaka, Toshio Teraguchi
2012	—	`conf`	Research for measuring velocity and direction of current from dynamic image. SCIS&ISIS Yuki Fukushima, Etsuji Kitagawa, Hirokazu Muraki, Takehiro Kashiyama, Shigenori Tanaka
2012	—	`conf`	Research of technology for recognizing photography management items from image data of construction fields. SCIS&ISIS Etsuji Kitagawa, Shigenori Tanaka, Satoshi Abiko, Katsuma Wakabayashi, Wenyuan Jiang
2009	J	`jnl`	Roles of K151 and D180 in L-2-haloacid dehalogenase from J. Comput. Chem. Takashi Nakamura, Azusa Yamaguchi, Hirotaka Kondo, Hirofumi Watanabe, Tatsuo Kurihara, Nobuyoshi Esaki, Shuichi Hirono, Shigenori Tanaka
2008	J	`jnl`	Molecular dynamics simulation study on the structural stabilities of polyglutamine peptides. Comput. Biol. Chem. Hajime Ogawa, Miki Nakano, Hirofumi Watanabe, E. B. Starikov, Stuart M. Rothstein, Shigenori Tanaka
2008	J	`jnl`	Theoretical analysis of binding specificity of influenza viral hemagglutinin to avian and human receptors based on the fragment molecular orbital method. Comput. Biol. Chem. Tatsunori Iwata, Kaori Fukuzawa, Katsuhisa Nakajima, Sachiko Aida-Hyugaji, Yuji Mochizuki, Hirofumi Watanabe, Shigenori Tanaka
2008	J	`jnl`	Water-mediated interactions in the CRP-cAMP-DNA complex: Does water mediate sequence-specific binding at the DNA primary-kink site? Comput. Biol. Chem. Bryan M. B. VanSchouwen, Heather L. Gordon, Stuart M. Rothstein, Yuto Komeiji, Kaori Fukuzawa, Shigenori Tanaka
2007	J	`jnl`	Intra- and intermolecular interactions between cyclic-AMP receptor protein and DNA: Ab J. Comput. Chem. Kaori Fukuzawa, Yuto Komeiji, Yuji Mochizuki, Akifumi Kato, Tatsuya Nakano, Shigenori Tanaka
2006	J	`jnl`	Intra- and intermolecular interactions between cyclic-AMP receptor protein and DNA: Ab initio fragment molecular orbital study. J. Comput. Chem. Kaori Fukuzawa, Yuto Komeiji, Yuji Mochizuki, Akifumi Kato, Tatsuya Nakano, Shigenori Tanaka
2005	—	`conf`	A Research and Development about the Automatic Creation System of the 3-Dimensional Model Using the Digital Video Camera. WSTST Etsuji Kitagawa, Shigenori Tanaka, Hitoshi Furuta, Toshiyuki Sugimachi
2005	—	`conf`	A Research on Traffic Calculation Using Stereo Video Camera. WSTST Hiroya Yoshida, Hirokazu Muraki, Shigenori Tanaka, Hitoshi Furuta, Shigenori Fujimaki, Yoshito Nishita
2005	—	`conf`	CAD Data Identity Determination Component - Logical Smart - . WSTST Yoshitaka Minami, Shigenori Tanaka, Hitoshi Furuta, Katsuhisa Itou
1996	C	`conf`	Knowledge-Based Expert System Combining Case-Based Reasoning and Rule-Based Reasoning to Select Repair and Retrofitting Methods for Fatigue Damage on Steel Bridge. IEA/AIE Shigenori Tanaka, Ichizou Mikami, Hidenori Maeda, Atsushi Kobayashi