Sheng Zhong

18 papers C 2Journal 15Unranked 1
YearRankTypeTitle / Venue / Authors
2019 J jnl
EpiAlignment: alignment with both DNA sequence and epigenomic data.
Nucleic Acids Res.
Jia Lu, Xiaoyi Cao, Sheng Zhong
2018 J jnl
A likelihood approach to testing hypotheses on the co-evolution of epigenome and genome.
PLoS Comput. Biol.
Jia Lu, Xiaoyi Cao, Sheng Zhong
2018 J jnl
GITAR: An Open Source Tool for Analysis and Visualization of Hi-C Data.
Genom. Proteom. Bioinform.
Riccardo Calandrelli, Qiuyang Wu, Jihong Guan, Sheng Zhong
2016 J jnl
GeNemo: a search engine for web-based functional genomic data.
Nucleic Acids Res.
Yongqing Zhang, Xiaoyi Cao, Sheng Zhong
2013 J jnl
Enabling interspecies epigenomic comparison with CEpBrowser.
Bioinform.
Xiaoyi Cao, Sheng Zhong
2013 J jnl
Understanding Variation in Transcription Factor Binding by Modeling Transcription Factor Genome-Epigenome Interactions.
PLoS Comput. Biol.
Chieh-Chun Chen, Shu Xiao, Dan Xie, Xiaoyi Cao, Chun-Xiao Song, Ting Wang, Chuan He, Sheng Zhong
2011 J jnl
Mapping personal functional data to personal genomes.
Bioinform.
Marcelo Rivas-Astroza, Dan Xie, Xiaoyi Cao, Sheng Zhong
2011 J jnl
Towards an Evolutionary Model of Transcription Networks.
PLoS Comput. Biol.
Dan Xie, Chieh-Chun Chen, Xin He, Xiaoyi Cao, Sheng Zhong
2010 J jnl
Modeling Co-Expression across Species for Complex Traits: Insights to the Difference of Human and Mouse Embryonic Stem Cells.
PLoS Comput. Biol.
Jun Cai, Dan Xie, Zhewen Fan, Hiram Chipperfield, John Marden, Wing H. Wong, Sheng Zhong
2010 J jnl
Network-based comparison of temporal gene expression patterns.
Bioinform.
Wei Huang, Xiaoyi Cao, Sheng Zhong
2009 J jnl
Dissecting Early Differentially Expressed Genes in a Mixture of Differentiating Embryonic Stem Cells.
PLoS Comput. Biol.
Feng Hong, Fang Fang, Xuming He, Xiaoyi Cao, Hiram Chipperfield, Dan Xie, Wing Hung Wong, Huck H. Ng, Sheng Zhong
2007 J jnl
Gene Ontology analysis in multiple gene clusters under multiple hypothesis testing framework.
Artif. Intell. Medicine
Sheng Zhong, Dan Xie
2007 J jnl
TagSmart: analysis and visualization for yeast mutant fitness data measured by tag microarrays.
BMC Bioinform.
Chulyun Kim, Sangkyum Kim, Russell Dorer, Dan Xie, Jiawei Han, Sheng Zhong
2005 J jnl
Ubic2 - Towards Ubiquitous Bio-Information Computing: Data Protocols, Middleware, and Web Services for Heterogeneous Biological Information Integration and Retrieval.
Int. J. Softw. Eng. Knowl. Eng.
Pengyu Hong, Sheng Zhong, Wing Hung Wong
2004 — conf
Comparative Analysis of Gene Sets in the Gene Ontology Space under the Multiple Hypothesis Testing Framework.
CSB
Sheng Zhong, Lu Tian, Cheng Li, Kai-Florian Storch, Wing Hung Wong
2004 C conf
In silico prediction of transcription factors that interact with the E2F family of transcription factors.
ICARCV
Sheng Zhong, Qing Zhou, Paloma Giangrande, Joseph R. Nevins, Wing Hung Wong
2004 C conf
Towards Ubiquitous Bio-Information Computing: Data Protocols, Middleware, and Web Services for Heterogeneous Biological Information Integration and Retrieval.
BIBE
Pengyu Hong, Sheng Zhong, Wing Hung Wong
2003 J jnl
ChipInfo: software for extracting gene annotation and gene ontology information for microarray analysis.
Nucleic Acids Res.
Sheng Zhong, Cheng Li, Wing Hung Wong