Sheng Wang - RankMe

66 papers A* 9A 3B 4C 1Misc 2Journal 33Unranked 14

Year	Rank	Type	Title / Venue / Authors
2025	J	`jnl`	GrInAdapt: Scaling Retinal Vessel Structural Map Segmentation Through Grounding, Integrating and Adapting Multi-device, Multi-site, and Multi-modal Fundus Domains. CoRR Zixuan Liu, Aaron Honjaya, Yuekai Xu, Yi Zhang, Hefu Pan, Xin Wang, Linda G. Shapiro, Sheng Wang, Ruikang K. Wang
2025	—	`conf`	GrInAdapt: Source-Free Multi-target Domain Adaptation for Retinal Vessel Segmentation. MICCAI (5) Zixuan Liu, Aaron Honjaya, Yuekai Xu, Yi Zhang, Hefu Pan, Xin Wang, Linda G. Shapiro, Sheng Wang, Ruikang K. Wang
2024	A*	`conf`	A Comprehensive Survey of Scientific Large Language Models and Their Applications in Scientific Discovery. EMNLP Yu Zhang, Xiusi Chen, Bowen Jin, Sheng Wang, Shuiwang Ji, Wei Wang, Jiawei Han
2024	J	`jnl`	A Comprehensive Survey of Scientific Large Language Models and Their Applications in Scientific Discovery. CoRR Yu Zhang, Xiusi Chen, Bowen Jin, Sheng Wang, Shuiwang Ji, Wei Wang, Jiawei Han
2024	J	`jnl`	A bioactivity foundation model using pairwise meta-learning. Nat. Mac. Intell. Bin Feng, Zequn Liu, Nan-Lan Huang, Zhiping Xiao, Haomiao Zhang, Srbuhi Mirzoyan, Hanwen Xu, Jiaran Hao, Yinghui Xu, Ming Zhang, Sheng Wang
2024	J	`jnl`	BiomedParse: a biomedical foundation model for image parsing of everything everywhere all at once. CoRR Theodore Zhao, Yu Gu, Jianwei Yang, Naoto Usuyama, Ho Hin Lee, Tristan Naumann, Jianfeng Gao, Angela Crabtree, Jacob Abel, Christine Moung, Brian Piening, Carlo Bifulco, Mu Wei, Hoifung Poon, Sheng Wang
2024	J	`jnl`	Enhancing Hi-C contact matrices for loop detection with Capricorn: a multiview diffusion model. Bioinform. Tangqi Fang, Yifeng Liu, Addie Woicik, Minsi Lu, Anupama Jha, Xiao Wang, Gang Li, Borislav H. Hristov, Zixuan Liu, Hanwen Xu, William S. Noble, Sheng Wang
2024	J	`jnl`	FM-TS: Flow Matching for Time Series Generation. CoRR Yang Hu, Xiao Wang, Lirong Wu, Huatian Zhang, Stan Z. Li, Sheng Wang, Tianlong Chen
2024	A	`conf`	H2D: Hierarchical Heterogeneous Graph Learning Framework for Drug-Drug Interaction Prediction. CIKM Ran Zhang, Xuezhi Wang, Sheng Wang, Kunpeng Liu, Yuanchun Zhou, Pengfei Wang
2024	A*	`conf`	MMICL: Empowering Vision-language Model with Multi-Modal In-Context Learning. ICLR Haozhe Zhao, Zefan Cai, Shuzheng Si, Xiaojian Ma, Kaikai An, Liang Chen, Zixuan Liu, Sheng Wang, Wenjuan Han, Baobao Chang
2024	J	`jnl`	OCTCube: A 3D foundation model for optical coherence tomography that improves cross-dataset, cross-disease, cross-device and cross-modality analysis. CoRR Zixuan Liu, Hanwen Xu, Addie Woicik, Linda G. Shapiro, Marian Blazes, Yue Wu, Cecilia S. Lee, Aaron Y. Lee, Sheng Wang
2024	J	`jnl`	Panacea: A foundation model for clinical trial search, summarization, design, and recruitment. CoRR Jiacheng Lin, Hanwen Xu, Zifeng Wang, Sheng Wang, Jimeng Sun
2024	J	`jnl`	Poisoning medical knowledge using large language models. Nat. Mac. Intell. Junwei Yang, Hanwen Xu, Srbuhi Mirzoyan, Tong Chen, Zixuan Liu, Zequn Liu, Wei Ju, Luchen Liu, Zhiping Xiao, Ming Zhang, Sheng Wang
2024	J	`jnl`	T-Rex: Text-assisted Retrosynthesis Prediction. CoRR Yifeng Liu, Hanwen Xu, Tangqi Fang, Haocheng Xi, Zixuan Liu, Sheng Zhang, Hoifung Poon, Sheng Wang
2024	J	`jnl`	Training Small Multimodal Models to Bridge Biomedical Competency Gap: A Case Study in Radiology Imaging. CoRR Juan Manuel Zambrano Chaves, Shih-Cheng Huang, Yanbo Xu, Hanwen Xu, Naoto Usuyama, Sheng Zhang, Fei Wang, Yujia Xie, Mahmoud Khademi, Ziyi Yang, Hany Hassan Awadalla, Julia Gong, Houdong Hu, Jianwei Yang, Chunyuan Li, Jianfeng Gao, Yu Gu, Cliff Wong, Mu Wei, Tristan Naumann, Muhao Chen, Matthew P. Lungren, Serena Yeung-Levy, Curtis P. Langlotz, Sheng Wang, Hoifung Poon
2024	J	`jnl`	Unleashing the Power of LLMs as Multi-Modal Encoders for Text and Graph-Structured Data. CoRR Jiacheng Lin, Kun Qian, Haoyu Han, Nurendra Choudhary, Tianxin Wei, Zhongruo Wang, Sahika Genc, Edward W. Huang, Sheng Wang, Karthik Subbian, Danai Koutra, Jimeng Sun
2023	J	`jnl`	ChiMera: Learning with noisy labels by contrasting mixed-up augmentations. CoRR Zixuan Liu, Xin Zhang, Junjun He, Dan Fu, Dimitris Samaras, Robby Tan, Xiao Wang, Sheng Wang
2023	J	`jnl`	Extrapolating heterogeneous time-series gene expression data using Sagittarius. Nat. Mac. Intell. Addie Woicik, Mingxin Zhang, Janelle Chan, Jianzhu Ma, Sheng Wang
2023	A	`conf`	ForeSeer: Product Aspect Forecasting Using Temporal Graph Embedding. CIKM Zixuan Liu, Gaurush Hiranandani, Kun Qian, Edward W. Huang, Yi Xu, Belinda Zeng, Karthik Subbian, Sheng Wang
2023	J	`jnl`	ForeSeer: Product Aspect Forecasting Using Temporal Graph Embedding. CoRR Zixuan Liu, Gaurush Hiranandani, Kun Qian, Eddie W. Huang, Yi Xu, Belinda Zeng, Karthik Subbian, Sheng Wang
2023	J	`jnl`	Gemini: memory-efficient integration of hundreds of gene networks with high-order pooling. Bioinform. Addie Woicik, Mingxin Zhang, Hanwen Xu, Sara Mostafavi, Sheng Wang
2023	A*	`conf`	Graph-Aware Language Model Pre-Training on a Large Graph Corpus Can Help Multiple Graph Applications. KDD Han Xie, Da Zheng, Jun Ma, Houyu Zhang, Vassilis N. Ioannidis, Xiang Song, Qing Ping, Sheng Wang, Carl Yang, Yi Xu, Belinda Zeng, Trishul Chilimbi
2023	J	`jnl`	Graph-Aware Language Model Pre-Training on a Large Graph Corpus Can Help Multiple Graph Applications. CoRR Han Xie, Da Zheng, Jun Ma, Houyu Zhang, Vassilis N. Ioannidis, Xiang Song, Qing Ping, Sheng Wang, Carl Yang, Yi Xu, Belinda Zeng, Trishul Chilimbi
2023	A*	`conf`	GraphPrompt: Graph-Based Prompt Templates for Biomedical Synonym Prediction. AAAI Hanwen Xu, Jiayou Zhang, Zhirui Wang, Shizhuo Zhang, Megh Bhalerao, Yucong Liu, Dawei Zhu, Sheng Wang
2023	J	`jnl`	MMICL: Empowering Vision-language Model with Multi-Modal In-Context Learning. CoRR Haozhe Zhao, Zefan Cai, Shuzheng Si, Xiaojian Ma, Kaikai An, Liang Chen, Zixuan Liu, Sheng Wang, Wenjuan Han, Baobao Chang
2023	J	`jnl`	POPDx: an automated framework for patient phenotyping across 392 246 individuals in the UK Biobank study. J. Am. Medical Informatics Assoc. Lu Yang, Sheng Wang, Russ B. Altman
2023	B	`conf`	SST: Semantic and Structural Transformers for Hierarchy-aware Language Models in E-commerce. IEEE Big Data Karan Samel, Houyu Zhang, Jun Ma, Haoming Jiang, Qing Ping, Sheng Wang, Yi Xu, Belinda Zeng, Trishul Chilimbi
2023	J	`jnl`	Supervised biological network alignment with graph neural networks. Bioinform. Kerr Ding, Sheng Wang, Yunan Luo
2022	—	`conf`	Brain-Aware Replacements for Supervised Contrastive Learning in Detection of Alzheimer's Disease. MICCAI (1) Mehmet Saygin Seyfioglu, Zixuan Liu, Pranav Kamath, Sadjyot Gangolli, Sheng Wang, Thomas J. Grabowski, Linda G. Shapiro
2022	J	`jnl`	Brain-Aware Replacements for Supervised Contrastive Learning in Detection of Alzheimer's Disease. CoRR Mehmet Saygin Seyfioglu, Zixuan Liu, Pranav Kamath, Sadjyot Gangolli, Sheng Wang, Thomas J. Grabowski, Linda G. Shapiro
2022	—	`conf`	Deep Graph Mutual Learning for Cross-domain Recommendation. DASFAA (2) Yifan Wang, Yongkang Li, Shuai Li, Weiping Song, Jiangke Fan, Shan Gao, Ling Ma, Bing Cheng, Xunliang Cai, Sheng Wang, Ming Zhang
2022	A*	`conf`	DisenCite: Graph-Based Disentangled Representation Learning for Context-Specific Citation Generation. AAAI Yifan Wang, Yiping Song, Shuai Li, Chaoran Cheng, Wei Ju, Ming Zhang, Sheng Wang
2022	A*	`conf`	Graph-in-Graph Network for Automatic Gene Ontology Description Generation. KDD Fenglin Liu, Bang Yang, Chenyu You, Xian Wu, Shen Ge, Adelaide Woicik, Sheng Wang
2022	J	`jnl`	Graph-in-Graph Network for Automatic Gene Ontology Description Generation. CoRR Fenglin Liu, Bang Yang, Chenyu You, Xian Wu, Shen Ge, Adelaide Woicik, Sheng Wang
2022	B	`conf`	HE-SNE: Heterogeneous Event Sequence-based Streaming Network Embedding for Dynamic Behaviors. IJCNN Yifan Wang, Jianhao Shen, Yiping Song, Sheng Wang, Ming Zhang
2022	A*	`conf`	MetaFill: Text Infilling for Meta-Path Generation on Heterogeneous Information Networks. EMNLP Zequn Liu, Kefei Duan, Junwei Yang, Hanwen Xu, Ming Zhang, Sheng Wang
2022	J	`jnl`	MetaFill: Text Infilling for Meta-Path Generation on Heterogeneous Information Networks. CoRR Zequn Liu, Kefei Duan, Junwei Yang, Hanwen Xu, Ming Zhang, Sheng Wang
2022	J	`jnl`	POPDx: An Automated Framework for Patient Phenotyping across 392, 246 Individuals in the UK Biobank Study. CoRR Lu Yang, Sheng Wang, Russ B. Altman
2022	—	`conf`	Pathway2Text: Dataset and Method for Biomedical Pathway Description Generation. NAACL-HLT (Findings) Junwei Yang, Zequn Liu, Ming Zhang, Sheng Wang
2022	B	`conf`	ProTranslator: Zero-Shot Protein Function Prediction Using Textual Description. RECOMB Hanwen Xu, Sheng Wang
2022	—	`conf`	Seed-Guided Topic Discovery with Out-of-Vocabulary Seeds. NAACL-HLT Yu Zhang, Yu Meng, Xuan Wang, Sheng Wang, Jiawei Han
2022	J	`jnl`	Seed-Guided Topic Discovery with Out-of-Vocabulary Seeds. CoRR Yu Zhang, Yu Meng, Xuan Wang, Sheng Wang, Jiawei Han
2022	—	`conf`	Textomics: A Dataset for Genomics Data Summary Generation. ACL (1) Mu-Chun Wang, Zixuan Liu, Sheng Wang
2022	J	`jnl`	scPretrain: multi-task self-supervised learning for cell-type classification. Bioinform. Ruiyi Zhang, Yunan Luo, Jianzhu Ma, Ming Zhang, Sheng Wang
2021	A*	`conf`	Auto-Encoding Knowledge Graph for Unsupervised Medical Report Generation. NeurIPS Fenglin Liu, Chenyu You, Xian Wu, Shen Ge, Sheng Wang, Xu Sun
2021	J	`jnl`	Auto-Encoding Knowledge Graph for Unsupervised Medical Report Generation. CoRR Fenglin Liu, Chenyu You, Xian Wu, Shen Ge, Sheng Wang, Xu Sun
2021	J	`jnl`	Disease gene prediction with privileged information and heteroscedastic dropout. Bioinform. Juan Shu, Yu Li, Sheng Wang, Bowei Xi, Jianzhu Ma
2021	J	`jnl`	DisenHAN: Disentangled Heterogeneous Graph Attention Network for Recommendation. CoRR Yifan Wang, Suyao Tang, Yuntong Lei, Weiping Song, Sheng Wang, Ming Zhang
2021	J	`jnl`	GraphPrompt: Biomedical Entity Normalization Using Graph-based Prompt Templates. CoRR Jiayou Zhang, Zhirui Wang, Shizhuo Zhang, Megh Manoj Bhalerao, Yucong Liu, Dawei Zhu, Sheng Wang
2021	—	`conf`	Graphine: A Dataset for Graph-aware Terminology Definition Generation. EMNLP (1) Zequn Liu, Shukai Wang, Yiyang Gu, Ruiyi Zhang, Ming Zhang, Sheng Wang
2021	J	`jnl`	Graphine: A Dataset for Graph-aware Terminology Definition Generation. CoRR Zequn Liu, Shukai Wang, Yiyang Gu, Ruiyi Zhang, Ming Zhang, Sheng Wang
2021	—	`conf`	HYPON: embedding biomedical ontology with entity sets. BCB Zhuoyan Li, Sheng Wang
2020	A	`conf`	DisenHAN: Disentangled Heterogeneous Graph Attention Network for Recommendation. CIKM Yifan Wang, Suyao Tang, Yuntong Lei, Weiping Song, Sheng Wang, Ming Zhang
2020	J	`jnl`	Gaussian embedding for large-scale gene set analysis. Nat. Mach. Intell. Sheng Wang, Emily R. Flynn, Russ B. Altman
2019	B	`conf`	GRep: Gene Set Representation via Gaussian Embedding. RECOMB Sheng Wang, Emily R. Flynn, Russ B. Altman
2018	Misc	`conf`	VisAGE: Integrating external knowledge into electronic medical record visualization. PSB Edward W. Huang, Sheng Wang, ChengXiang Zhai
2017	Misc	`conf`	Framing Electronic Medical Records as Polylingual Documents in Query Expansion. AMIA Edward W. Huang, Sheng Wang, Doris J. Lee, Runshun Zhang, Baoyan Liu, Xuezhong Zhou, ChengXiang Zhai
2017	—	`conf`	HEMnet: Integration of Electronic Medical Records with Molecular Interaction Networks and Domain Knowledge for Survival Analysis. BCB Edward W. Huang, Sheng Wang, Bingxue Li, Ran Zhang, Baoyan Liu, Runshun Zhang, Jie Liu, Xuezhong Zhou, Hongsheng Lin, ChengXiang Zhai
2016	—	`conf`	A conditional probabilistic model for joint analysis of symptoms, diseases, and herbs in traditional Chinese medicine patient records. BIBM Sheng Wang, Edward W. Huang, Runshun Zhang, Xiaoping Zhang, Baoyan Liu, Xuezhong Zhou, ChengXiang Zhai
2016	J	`jnl`	Early identification of adverse drug reactions from search log data. J. Biomed. Informatics Ryen W. White, Sheng Wang, Apurv Pant, Rave Harpaz, Pushpraj Shukla, Walter Sun, William DuMouchel, Eric Horvitz
2016	—	`conf`	PaReCat: Patient Record Subcategorization for Precision Traditional Chinese Medicine. BCB Edward W. Huang, Sheng Wang, Runshun Zhang, Baoyan Liu, Xuezhong Zhou, ChengXiang Zhai
2014	A*	`conf`	SUIT: A Supervised User-Item Based Topic Model for Sentiment Analysis. AAAI Fangtao Li, Sheng Wang, Shenghua Liu, Ming Zhang
2014	—	`conf`	SideEffectPTM: an unsupervised topic model to mine adverse drug reactions from health forums. BCB Sheng Wang, Yanen Li, Duncan C. Ferguson, ChengXiang Zhai
2013	C	`conf`	Measuring Strength of Ties in Social Network. APWeb Dakui Sheng, Tao Sun, Sheng Wang, Ziqi Wang, Ming Zhang
2013	—	`conf`	Supervised Topic Model with Consideration of User and Item. AAAI (Late-Breaking Developments) Sheng Wang, Fangtao Li, Ming Zhang
2012	—	`conf`	Please spread: recommending tweets for retweeting with implicit feedback. DUBMMSM Sheng Wang, Xiaobo Zhou, Ziqi Wang, Ming Zhang