Sharon Aviran

16 papers B 3Journal 10Unranked 2
YearRankTypeTitle / Venue / Authors
2025 J jnl
Differentiable Folding for Nearest Neighbor Model Optimization.
CoRR
Ryan K. Krueger, Sharon Aviran, David H. Mathews, Jeffrey Zuber, Max Ward
2017 J jnl
Comparative and integrative analysis of RNA structural profiling data: current practices and emerging questions.
Quant. Biol.
Krishna Choudhary, Fei Deng, Sharon Aviran
2017 J jnl
FoldAtlas: a repository for genome-wide RNA structure probing data.
Bioinform.
Matthew Norris, Chun Kit Kwok, Jitender Cheema, Matthew Hartley, Richard J. Morris, Sharon Aviran, Yiliang Ding
2017 J jnl
SEQualyzer: interactive tool for quality control and exploratory analysis of high-throughput RNA structural profiling data.
Bioinform.
Krishna Choudhary, Luyao Ruan, Fei Deng, Nathan P. Shih, Sharon Aviran
2016 J jnl
Metrics for rapid quality control in RNA structure probing experiments.
Bioinform.
Krishna Choudhary, Nathan P. Shih, Fei Deng, Mirko Ledda, Bo Li, Sharon Aviran
2012 — conf
Session TA7b: Sequence and genome analysis (partially invited).
ACSCC
Sharon Aviran
2011 — conf
RNA structure characterization from chemical mapping experiments.
Allerton
Sharon Aviran, Julius B. Lucks, Lior Pachter
2010 J jnl
Computational Models of HIV-1 Resistance to Gene Therapy Elucidate Therapy Design Principles.
PLoS Comput. Biol.
Sharon Aviran, Priya S. Shah, David V. Schaffer, Adam P. Arkin
2008 J jnl
Optimal Parsing Trees for Run-Length Coding of Biased Data.
IEEE Trans. Inf. Theory
Sharon Aviran, Paul H. Siegel, Jack K. Wolf
2006 — —
Constrained coding and signal processing for data storage systems.
Sharon Aviran
2006 B conf
Optimal Parsing Trees for Run-Length Coding of Biased Data.
ISIT
Sharon Aviran, Paul H. Siegel, Jack K. Wolf
2005 J jnl
An improvement to the bit stuffing algorithm.
IEEE Trans. Inf. Theory
Sharon Aviran, Paul H. Siegel, Jack K. Wolf
2005 B conf
Two-dimensional bit-stuffing schemes with multiple transformers.
ISIT
Sharon Aviran, Paul H. Siegel, Jack K. Wolf
2004 B conf
An improvement to the bit stuffing algorithm.
ISIT
Sharon Aviran, Paul H. Siegel, Jack K. Wolf
2002 J jnl
Momentopes, the Complexity of Vector Partitioning, and Davenport - Schinzel Sequences.
Discret. Comput. Geom.
Sharon Aviran, Shmuel Onn
2002 J jnl
Vertex characterization of partition polytopes of bipartitions and of planar point sets.
Discret. Appl. Math.
Sharon Aviran, Nissan Lev-Tov, Shmuel Onn, Uriel G. Rothblum