Shaherin Basith

15 papers Journal 14Unranked 1

Year	Rank	Type	Title / Venue / Authors
2025	J	`jnl`	CPPpred-En: Ensemble framework integrating a protein language model and conventional features for highly accurate cell-penetrating peptide prediction. Comput. Biol. Medicine Yongeun Jang, Minjun Kwon, Seok Gi Kim, Nimisha Pradeep George, Ji Su Hwang, Shaherin Basith, Gwang Lee
2025	J	`jnl`	Employing Automated Machine Learning (AutoML) Methods to Facilitate the J. Chem. Inf. Model. Herim Han, Bilal Shaker, Jin Hee Lee, Sunghwan Choi, Sanghee Yoon, Maninder Singh, Shaherin Basith, Minghua Cui, Sunil Ahn, Junyoung An, Soosung Kang, Min Sun Yeom, Sun Choi
2025	J	`jnl`	EnsemPred-ACP: Combining machine and deep learning to improve anticancer peptide prediction. Comput. Biol. Medicine Minjun Kwon, Yongeun Jang, Ji Su Hwang, Seok Gi Kim, Nimisha Pradeep George, Shaherin Basith, Gwang Lee
2024	J	`jnl`	Unveiling local and global conformational changes and allosteric communications in SOD1 systems using molecular dynamics simulation and network analyses. Comput. Biol. Medicine Shaherin Basith, Balachandran Manavalan, Gwang Lee
2024	J	`jnl`	mHPpred: Accurate identification of peptide hormones using multi-view feature learning. Comput. Biol. Medicine Shaherin Basith, Vinoth Kumar Sangaraju, Balachandran Manavalan, Gwang Lee
2023	J	`jnl`	ADP-Fuse: A novel two-layer machine learning predictor to identify antidiabetic peptides and diabetes types using multiview information. Comput. Biol. Medicine Shaherin Basith, Nhat Truong Pham, Minkyung Song, Gwang Lee, Balachandran Manavalan
2022	J	`jnl`	Amyotrophic lateral sclerosis disease-related mutations disrupt the dimerization of superoxide dismutase 1 - A comparative molecular dynamics simulation study. Comput. Biol. Medicine Shaherin Basith, Balachandran Manavalan, Gwang Lee
2022	J	`jnl`	Comparative analysis of machine learning-based approaches for identifying therapeutic peptides targeting SARS-CoV-2. Briefings Bioinform. Balachandran Manavalan, Shaherin Basith, Gwang Lee
2022	J	`jnl`	STALLION: a stacking-based ensemble learning framework for prokaryotic lysine acetylation site prediction. Briefings Bioinform. Shaherin Basith, Gwang Lee, Balachandran Manavalan
2021	J	`jnl`	Computational prediction of species-specific yeast DNA replication origin via iterative feature representation. Briefings Bioinform. Balachandran Manavalan, Shaherin Basith, Tae Hwan Shin, Gwang Lee
2021	J	`jnl`	Integrative machine learning framework for the identification of cell-specific enhancers from the human genome. Briefings Bioinform. Shaherin Basith, Md. Mehedi Hasan, Gwang Lee, Leyi Wei, Balachandran Manavalan
2021	J	`jnl`	Meta-i6mA: an interspecies predictor for identifying DNA N6-methyladenine sites of plant genomes by exploiting informative features in an integrative machine-learning framework. Briefings Bioinform. Md. Mehedi Hasan, Shaherin Basith, Mst. Shamima Khatun, Gwang Lee, Balachandran Manavalan, Hiroyuki Kurata
2020	J	`jnl`	HLPpred-Fuse: improved and robust prediction of hemolytic peptide and its activity by fusing multiple feature representation. Bioinform. Md. Mehedi Hasan, Nalini Schaduangrat, Shaherin Basith, Gwang Lee, Watshara Shoombuatong, Balachandran Manavalan
2019	J	`jnl`	mAHTPred: a sequence-based meta-predictor for improving the prediction of anti-hypertensive peptides using effective feature representation. Bioinform. Balachandran Manavalan, Shaherin Basith, Tae Hwan Shin, Leyi Wei, Gwang Lee
2012	—	`conf`	An in-depth analysis of the molecular dynamics and structural aspects of IKB proteins. BCB Shaherin Basith, Sangdun Choi