Serguei Pakhomov

47 papers A* 1A 1B 1Misc 3Journal 28Unranked 12

Year	Rank	Type	Title / Venue / Authors
2025	J	`jnl`	"Is There Anything Else?": Examining Administrator Influence on Linguistic Features from the Cookie Theft Picture Description Cognitive Test. CoRR Changye Li, Zhecheng Sheng, Trevor Cohen, Serguei Pakhomov
2025	J	`jnl`	Bigger But Not Better: Small Neural Language Models Outperform Large Language Models in Detection of Thought Disorder. CoRR Changye Li, Weizhe Xu, Serguei Pakhomov, Ellen Bradley, Dror Ben-Zeev, Trevor Cohen
2025	J	`jnl`	Coherence and comprehensibility: Large language models predict lay understanding of health-related content. J. Biomed. Informatics Trevor Cohen, Weizhe Xu, Yue Guo, Serguei Pakhomov, Gondy Leroy
2025	J	`jnl`	Mitigating Confounding in Speech-Based Dementia Detection through Weight Masking. CoRR Zhecheng Sheng, Xiruo Ding, Brian Hur, Changye Li, Trevor Cohen, Serguei Pakhomov
2025	J	`jnl`	Perplexity and proximity: Large language model perplexity complements semantic distance metrics for the detection of incoherent speech. J. Biomed. Informatics Weizhe Xu, Serguei Pakhomov, Patrick Heagerty, Eric Horvitz, Ellen Bradley, Joshua Woolley, Andrew T. Campbell, Alex S. Cohen, Dror Ben-Zeev, Trevor Cohen
2025	J	`jnl`	Reading Between the Lines: Combining Pause Dynamics and Semantic Coherence for Automated Assessment of Thought Disorder. CoRR Feng Chen, Weizhe Xu, Changye Li, Serguei Pakhomov, Alex Cohen, Simran Bhola, Sandy Yin, Sunny X. Tang, Michael Mackinley, Lena Palaniyappan, Dror Ben-Zeev, Trevor Cohen
2025	J	`jnl`	Tailoring task arithmetic to address bias in models trained on multi-institutional datasets. J. Biomed. Informatics Xiruo Ding, Zhecheng Sheng, Brian Hur, Justin Tauscher, Dror Ben-Zeev, Meliha Yetisgen, Serguei Pakhomov, Trevor Cohen
2024	J	`jnl`	Reexamining Racial Disparities in Automatic Speech Recognition Performance: The Role of Confounding by Provenance. CoRR Changye Li, Trevor Cohen, Serguei Pakhomov
2024	—	`conf`	Too Big to Fail: Larger Language Models are Disproportionately Resilient to Induction of Dementia-Related Linguistic Anomalies. ACL (Findings) Changye Li, Zhecheng Sheng, Trevor Cohen, Serguei Pakhomov
2024	J	`jnl`	Too Big to Fail: Larger Language Models are Disproportionately Resilient to Induction of Dementia-Related Linguistic Anomalies. CoRR Changye Li, Zhecheng Sheng, Trevor Cohen, Serguei Pakhomov
2024	J	`jnl`	Useful Blunders: Can Automated Speech Recognition Errors Improve Downstream Dementia Classification? CoRR Changye Li, Weizhe Xu, Trevor Cohen, Serguei Pakhomov
2024	J	`jnl`	Useful blunders: Can automated speech recognition errors improve downstream dementia classification? J. Biomed. Informatics Changye Li, Weizhe Xu, Trevor Cohen, Serguei Pakhomov
2023	J	`jnl`	A Dialogue System for Assessing Activities of Daily Living: Improving Consistency with Grounded Knowledge. CoRR Zhecheng Sheng, Raymond L. Finzel, Michael Lucke, Sheena Dufresne, Maria L. Gini, Serguei Pakhomov
2023	A	`conf`	Automated Neural Nursing Assistant (ANNA): An Over-The-Phone System for Cognitive Monitoring. INTERSPEECH Jacob C. Solinsky, Raymond L. Finzel, Martin Michalowski, Serguei Pakhomov
2023	J	`jnl`	Backdoor Adjustment of Confounding by Provenance for Robust Text Classification of Multi-institutional Clinical Notes. CoRR Xiruo Ding, Zhecheng Sheng, Meliha Yetisgen, Serguei Pakhomov, Trevor Cohen
2023	J	`jnl`	TRESTLE: Toolkit for Reproducible Execution of Speech, Text and Language Experiments. CoRR Changye Li, Trevor Cohen, Martin Michalowski, Serguei Pakhomov
2023	J	`jnl`	The Power of Speech in the Wild: Discriminative Power of Daily Voice Diaries in Understanding Auditory Verbal Hallucinations Using Deep Learning. Proc. ACM Interact. Mob. Wearable Ubiquitous Technol. Weichen Wang, Weizhe Xu, Ayesha Chander, Subigya Nepal, Benjamin Buck, Serguei Pakhomov, Trevor Cohen, Dror Ben-Zeev, Andrew Campbell
2022	J	`jnl`	A conversational agent system for dietary supplements use. BMC Medical Informatics Decis. Mak. Esha Singh, Anusha Bompelli, Ruyuan Wan, Jiang Bian, Serguei Pakhomov, Rui Zhang
2022	J	`jnl`	Fully automated detection of formal thought disorder with Time-series Augmented Representations for Detection of Incoherent Speech (TARDIS). J. Biomed. Informatics Weizhe Xu, Weichen Wang, Jake Portanova, Ayesha Chander, Andrew Campbell, Serguei Pakhomov, Dror Ben-Zeev, Trevor Cohen
2022	—	`conf`	GPT-D: Inducing Dementia-related Linguistic Anomalies by Deliberate Degradation of Artificial Neural Language Models. ACL (1) Changye Li, David S. Knopman, Weizhe Xu, Trevor Cohen, Serguei Pakhomov
2022	J	`jnl`	GPT-D: Inducing Dementia-related Linguistic Anomalies by Deliberate Degradation of Artificial Neural Language Models. CoRR Changye Li, David S. Knopman, Weizhe Xu, Trevor Cohen, Serguei Pakhomov
2022	J	`jnl`	The Far Side of Failure: Investigating the Impact of Speech Recognition Errors on Subsequent Dementia Classification. CoRR Changye Li, Trevor Cohen, Serguei Pakhomov
2021	J	`jnl`	A Conversational Agent System for Dietary Supplements Use. CoRR Esha Singh, Anusha Bompelli, Ruyuan Wan, Jiang Bian, Serguei Pakhomov, Rui Zhang
2021	—	`conf`	Conversational Agent for Daily Living Assessment Coaching Demo. EACL (System Demonstrations) Raymond L. Finzel, Aditya Gaydhani, Sheena Dufresne, Maria L. Gini, Serguei Pakhomov
2021	J	`jnl`	Crossing the "Cookie Theft" Corpus Chasm: Applying What BERT Learns From Outside Data to the ADReSS Challenge Dementia Detection Task. Frontiers Comput. Sci. Yue Guo, Changye Li, Carol Roan, Serguei Pakhomov, Trevor Cohen
2020	—	`conf`	A Prototype Conversational Agent for Dietary Supplements. ICHI Esha Singh, Anusha Bompelli, Andrew Yang, Andrew Wang, Serguei Pakhomov, Rui Zhang
2020	A*	`conf`	A Tale of Two Perplexities: Sensitivity of Neural Language Models to Lexical Retrieval Deficits in Dementia of the Alzheimer's Type. ACL Trevor Cohen, Serguei Pakhomov
2020	J	`jnl`	A Tale of Two Perplexities: Sensitivity of Neural Language Models to Lexical Retrieval Deficits in Dementia of the Alzheimer's Type. CoRR Trevor Cohen, Serguei Pakhomov
2020	J	`jnl`	COVID-19 TestNorm: A tool to normalize COVID-19 testing names to LOINC codes. J. Am. Medical Informatics Assoc. Xiao Dong, Jianfu Li, Ekin Soysal, Jiang Bian, Scott L. DuVall, Elizabeth Hanchrow, Hongfang Liu, Kristine E. Lynch, Michael E. Matheny, Karthik Natarajan, Lucila Ohno-Machado, Serguei Pakhomov, Ruth Madeleine Reeves, Amy M. Sitapati, Swapna Abhyankar, Theresa Cullen, Jami Deckard, Xiaoqian Jiang, Robert Murphy, Hua Xu
2020	B	`conf`	Comparing NLP Systems to Extract Entities of Eligibility Criteria in Dietary Supplements Clinical Trials Using NLP-ADAPT. AIME Anusha Bompelli, Greg M. Silverman, Raymond L. Finzel, Jake Vasilakes, Benjamin Knoll, Serguei Pakhomov, Rui Zhang
2020	—	`conf`	Conversational Agent for Daily Living Assessment Coaching. AI4Function@IJCAI Aditya Gaydhani, Raymond L. Finzel, Sheena Dufresne, Maria L. Gini, Serguei Pakhomov
2020	—	`ch.`	Spoken Dialogue Systems for Medication Management. Precision Health and Medicine Joan Zheng, Raymond L. Finzel, Serguei Pakhomov, Maria L. Gini
2019	J	`jnl`	A privacy-preserving distributed filtering framework for NLP artifacts. BMC Medical Informatics Decis. Mak. Md. Nazmus Sadat, Md Momin Al Aziz, Noman Mohammed, Serguei Pakhomov, Hongfang Liu, Xiaoqian Jiang
2019	J	`jnl`	Challenges and Opportunities to Improve the Clinician Experience Reviewing Electronic Progress Notes. Appl. Clin. Inform. Gretchen M. Hultman, Jenna L. Marquard, Elizabeth Lindemann, Elliot G. Arsoniadis, Serguei Pakhomov, Genevieve B. Melton
2019	—	`conf`	Electronic Progress Note Reading Patterns: An Eye Tracking Analysis. MedInfo Gretchen M. Hultman, Jenna L. Marquard, Swaminathan Kandaswamy, Elizabeth A. Lindemann, Serguei Pakhomov, Genevieve B. Melton
2019	—	`conf`	Named Entity Recognition in Prehospital Trauma Care. MedInfo Greg M. Silverman, Elizabeth A. Lindemann, Geetanjali Rajamani, Raymond L. Finzel, Reed McEwan, Benjamin C. Knoll, Serguei Pakhomov, Genevieve B. Melton, Christopher J. Tignanelli
2018	J	`jnl`	CLAMP - a toolkit for efficiently building customized clinical natural language processing pipelines. J. Am. Medical Informatics Assoc. Ergin Soysal, Jingqi Wang, Min Jiang, Yonghui Wu, Serguei Pakhomov, Hongfang Liu, Hua Xu
2017	—	`conf`	Usability Evaluation of NLP-PIER: A Clinical Document Search Engine for Researchers. MedInfo Gretchen M. Hultman, Reed McEwan, Serguei Pakhomov, Elizabeth Lindemann, Steven J. Skube, Genevieve B. Melton
2017	—	`conf`	What Analogies Reveal about Word Vectors and their Compositionality. *SEM Gregory P. Finley, Stephanie Farmer, Serguei Pakhomov
2015	J	`jnl`	Domain adaption of parsing for operative notes. J. Biomed. Informatics Yan Wang, Serguei Pakhomov, James O. Ryan, Genevieve B. Melton
2015	J	`jnl`	Ease of adoption of clinical natural language processing software: An evaluation of five systems. J. Biomed. Informatics Kai Zheng, V. G. Vinod Vydiswaran, Yang Liu, Yue Wang, Amber Stubbs, Özlem Uzuner, Anupama E. Gururaj, Samuel Bayer, John S. Aberdeen, Anna Rumshisky, Serguei Pakhomov, Hongfang Liu, Hua Xu
2010	—	`conf`	Automated Identification of Synonyms in Biomedical Acronym Sense Inventories. Louhi@NAACL-HLT Genevieve B. Melton, Sungrim Moon, Bridget T. McInnes, Serguei Pakhomov
2007	—	`conf`	Determining the Syntactic Structure of Medical Terms in Clinical Notes. BioNLP@ACL Bridget T. McInnes, Ted Pedersen, Serguei Pakhomov
2005	Misc	`conf`	Abbreviation and Acronym Disambiguation in Clinical Discourse. AMIA Serguei Pakhomov, Ted Pedersen, Christopher G. Chute
2005	Misc	`conf`	Frame Semantics and the Domain of Functioning, Disability and Health. AMIA Guergana Savova, Marcelline R. Harris, Serguei Pakhomov, Christopher G. Chute
2005	Misc	`conf`	Medical Facts to Support Inferencing in Natural Language Processing. AMIA Thomas C. Rindflesch, Serguei Pakhomov, Marcelo Fiszman, Halil Kilicoglu, Vincent R. Sánchez
2004	—	`conf`	Creating a Test Corpus of Clinical Notes Manually Tagged for Part-of-Speech Information. NLPBA/BioNLP Serguei Pakhomov, Anni Coden, Christopher G. Chute