Serena J. Counsell

46 papers B 1Journal 30Unranked 15

Year	Rank	Type	Title / Venue / Authors
2025	J	`jnl`	Head to head: Comparing intracranial volumes using 3D ultrasound and fetal MRI. NeuroImage Inge M. van Ooijen, Gaby van Iersel, Lotte Meijerink, Jalmar Teeuw, Elise Turk, Maaike Nijman, Daniel Cromb, Alena Uus, Serena J. Counsell, Mireille N. Bekker, Maria-Luisa Tataranno, Hilleke E. Hulshoff Pol, Sonja M. C. de Zwarte, Manon J. N. L. Benders
2022	J	`jnl`	Predicting age and clinical risk from the neonatal connectome. NeuroImage Yassine Taoudi-Benchekroun, Daan Christiaens, Irina Grigorescu, Oliver Gale-Grant, Andreas Schuh, Maximilian Pietsch, Andrew Chew, Nicholas Harper, Shona Falconer, Tanya Poppe, Emer J. Hughes, Jana Hutter, Anthony N. Price, Jacques-Donald Tournier, Lucilio Cordero-Grande, Serena J. Counsell, Daniel Rueckert, Tomoki Arichi, Joseph V. Hajnal, A. David Edwards, Maria Deprez, Dafnis Batalle
2022	—	`conf`	Segmentation of Periventricular White Matter in Neonatal Brain MRI: Analysis of Brain Maturation in Term and Preterm Cohorts. PIPPI@MICCAI Alena Uus, Mohammad-Usamah Ayub, Abi Gartner, Vanessa Kyriakopoulou, Maximilian Pietsch, Irina Grigorescu, Daan Christiaens, Jana Hutter, Lucilio Cordero-Grande, Anthony Price, Dafnis Batalle, Serena J. Counsell, Joseph V. Hajnal, A. David Edwards, Mary A. Rutherford, Maria Deprez
2021	—	`conf`	Detection of Injury and Automated Triage of Preterm Neonatal MRI Using Patch-Based Gaussian Processes. UNSURE/PIPPI@MICCAI Russell Macleod, Serena J. Counsell, David W. Carmichael, Ralica Dimitrova, Maximilian Pietsch, A. David Edwards, Mary A. Rutherford, Jonathan O'Muircheartaigh
2021	J	`jnl`	Preterm birth alters the development of cortical microstructure and morphology at term-equivalent age. NeuroImage Ralica Dimitrova, Maximilian Pietsch, Judit Ciarrusta, Sean P. Fitzgibbon, Logan Z. J. Williams, Daan Christiaens, Lucilio Cordero-Grande, Dafnis Batalle, Antonios Makropoulos, Andreas Schuh, Anthony N. Price, Jana Hutter, Rui Pedro A. G. Teixeira, Emer J. Hughes, Andrew Chew, Shona Falconer, Olivia Carney, Alexia Egloff, Jacques-Donald Tournier, Grainne M. McAlonan, Mary A. Rutherford, Serena J. Counsell, Emma C. Robinson, Joseph V. Hajnal, Daniel Rueckert, A. David Edwards, Jonathan O'Muircheartaigh
2020	—	`conf`	Automatic Detection of Neonatal Brain Injury on MRI. ASMUS/PIPPI@MICCAI Russell Macleod, Jonathan O'Muircheartaigh, A. David Edwards, David W. Carmichael, Mary A. Rutherford, Serena J. Counsell
2020	J	`jnl`	Higher Order Spherical Harmonics Reconstruction of Fetal Diffusion MRI With Intensity Correction. IEEE Trans. Medical Imaging Maria Deprez, Anthony Price, Daan Christiaens, Georgia Lockwood Estrin, Lucilio Cordero-Grande, Jana Hutter, Alessandro Daducci, Jacques-Donald Tournier, Mary A. Rutherford, Serena J. Counsell, Meritxell Bach Cuadra, Joseph V. Hajnal
2019	J	`jnl`	A framework for multi-component analysis of diffusion MRI data over the neonatal period. NeuroImage Maximilian Pietsch, Daan Christiaens, Jana Hutter, Lucilio Cordero-Grande, Anthony N. Price, Emer J. Hughes, A. David Edwards, Joseph V. Hajnal, Serena J. Counsell, Jacques-Donald Tournier
2019	J	`jnl`	Different patterns of cortical maturation before and after 38 weeks gestational age demonstrated by diffusion MRI NeuroImage Dafnis Batalle, Jonathan O'Muircheartaigh, Antonios Makropoulos, Christopher J. Kelly, Ralica Dimitrova, Emer J. Hughes, Joseph V. Hajnal, Hui Zhang, Daniel C. Alexander, A. David Edwards, Serena J. Counsell
2018	J	`jnl`	A review on automatic fetal and neonatal brain MRI segmentation. NeuroImage Antonios Makropoulos, Serena J. Counsell, Daniel Rueckert
2018	J	`jnl`	The developing human connectome project: A minimal processing pipeline for neonatal cortical surface reconstruction. NeuroImage Antonios Makropoulos, Emma C. Robinson, Andreas Schuh, Robert Wright, Sean P. Fitzgibbon, Jelena Bozek, Serena J. Counsell, Johannes K. Steinweg, Katy Vecchiato, Jonathan Passerat-Palmbach, Gregor Lenz, Filippo Mortari, Tencho Tenev, Eugene P. Duff, Matteo Bastiani, Lucilio Cordero-Grande, Emer J. Hughes, Nora Tusor, Daniel Rueckert
2017	J	`jnl`	A tract-specific approach to assessing white matter in preterm infants. NeuroImage Diliana Pecheva, Paul A. Yushkevich, Dafnis Batalle, Emer J. Hughes, Paul Aljabar, Julia Wurie, Joseph V. Hajnal, A. David Edwards, Daniel C. Alexander, Serena J. Counsell, Hui Zhang
2017	J	`jnl`	Early development of structural networks and the impact of prematurity on brain connectivity. NeuroImage Dafnis Batalle, Emer J. Hughes, Hui Zhang, Jacques-Donald Tournier, Nora Tusor, Paul Aljabar, Luqman Wali, Daniel C. Alexander, Joseph V. Hajnal, Chiara Nosarti, A. David Edwards, Serena J. Counsell
2017	J	`jnl`	The emergence of functional architecture during early brain development. NeuroImage Kristin Keunen, Serena J. Counsell, Manon J. N. L. Benders
2016	J	`jnl`	Machine-learning to characterise neonatal functional connectivity in the preterm brain. NeuroImage Gareth Ball, Paul Aljabar, Tomoki Arichi, Nora Tusor, D. Cox, Nazakat Merchant, P. Nongena, Joseph V. Hajnal, A. David Edwards, Serena J. Counsell
2016	J	`jnl`	Regional growth and atlasing of the developing human brain. NeuroImage Antonios Makropoulos, Paul Aljabar, Robert Wright, Britta Hüning, Nazakat Merchant, Tomoki Arichi, Nora Tusor, Joseph V. Hajnal, A. David Edwards, Serena J. Counsell, Daniel Rueckert
2015	J	`jnl`	Evaluation of automatic neonatal brain segmentation algorithms: The NeoBrainS12 challenge. Medical Image Anal. Ivana Isgum, Manon J. N. L. Benders, Brian B. Avants, Manuel Jorge Cardoso, Serena J. Counsell, Elda Fischi Gomez, Laura Gui, Petra S. Hüppi, Karina J. Kersbergen, Antonios Makropoulos, Andrew Melbourne, Pim Moeskops, Christian P. Mol, Maria Kuklisova-Murgasova, Daniel Rueckert, Julia A. Schnabel, Vedran Srhoj-Egekher, Jue Wu, Siying Wang, Linda S. de Vries, Max A. Viergever
2015	—	`conf`	Learning and Combining Image Similarities for Neonatal Brain Population Studies. MLMI Veronika A. M. Zimmer, Ben Glocker, Paul Aljabar, Serena J. Counsell, Mary A. Rutherford, A. David Edwards, Joseph V. Hajnal, Miguel Ángel González Ballester, Daniel Rueckert, Gemma Piella
2014	J	`jnl`	Automatic Whole Brain MRI Segmentation of the Developing Neonatal Brain. IEEE Trans. Medical Imaging Antonios Makropoulos, Ioannis S. Gousias, Christian Ledig, Paul Aljabar, Ahmed Serag, Joseph V. Hajnal, A. David Edwards, Serena J. Counsell, Daniel Rueckert
2014	—	`conf`	Construction of a 4D Brain Atlas and Growth Model Using Diffeomorphic Registration. STIA Andreas Schuh, Maria Murgasova, Antonios Makropoulos, Christian Ledig, Serena J. Counsell, Joseph V. Hajnal, Paul Aljabar, Daniel Rueckert
2013	—	`conf`	Normalisation of Neonatal Brain Network Measures Using Stochastic Approaches. MICCAI (1) Markus Schirmer, Gareth Ball, Serena J. Counsell, A. David Edwards, Daniel Rueckert, Joseph V. Hajnal, Paul Aljabar
2012	J	`jnl`	Construction of a consistent high-definition spatio-temporal atlas of the developing brain using adaptive kernel regression. NeuroImage Ahmed Serag, Paul Aljabar, Gareth Ball, Serena J. Counsell, James P. Boardman, Mary A. Rutherford, A. David Edwards, Joseph V. Hajnal, Daniel Rueckert
2012	J	`jnl`	Development of BOLD signal hemodynamic responses in the human brain. NeuroImage Tomoki Arichi, Gianlorenzo Fagiolo, Marta Varela, Alejandro Melendez-Calderon, Alessandro Allievi, Nazakat Merchant, Nora Tusor, Serena J. Counsell, Etienne Burdet, Christian F. Beckmann, A. David Edwards
2012	J	`jnl`	Erratum to Construction of a consistent high-definition spatio-temporal atlas of the developing brain using adaptive kernel regression [NeuroImage 59/3(2012) 2255-2265]. NeuroImage Ahmed Serag, Paul Aljabar, Gareth Ball, Serena J. Counsell, James P. Boardman, Mary A. Rutherford, A. David Edwards, Joseph V. Hajnal, Daniel Rueckert
2012	—	`conf`	LISA: Longitudinal image registration via spatio-temporal atlases. ISBI Ahmed Serag, Paul Aljabar, Serena J. Counsell, James P. Boardman, Joseph V. Hajnal, Daniel Rueckert
2012	J	`jnl`	Magnetic resonance imaging of the newborn brain: Manual segmentation of labelled atlases in term-born and preterm infants. NeuroImage Ioannis S. Gousias, A. David Edwards, Mary A. Rutherford, Serena J. Counsell, Joseph V. Hajnal, Daniel Rueckert, Alexander Hammers
2012	J	`jnl`	Regional changes in thalamic shape and volume with increasing age. NeuroImage Emer J. Hughes, Jacqueline Bond, Patricia Svrckova, Antonios Makropoulos, Gareth Ball, David J. Sharp, A. David Edwards, Joseph V. Hajnal, Serena J. Counsell
2012	—	`conf`	Unsupervised Learning of Shape Complexity: Application to Brain Development. STIA Ahmed Serag, Ioannis S. Gousias, Antonios Makropoulos, Paul Aljabar, Joseph V. Hajnal, James P. Boardman, Serena J. Counsell, Daniel Rueckert
2011	J	`jnl`	A Combined Manifold Learning Analysis of Shape and Appearance to Characterize Neonatal Brain Development. IEEE Trans. Medical Imaging Paul Aljabar, Robin Wolz, Latha Srinivasan, Serena J. Counsell, Mary A. Rutherford, A. David Edwards, Joseph V. Hajnal, Daniel Rueckert
2011	—	`conf`	A Four-dimensional Atlas of Neonatal Brain MRI. MIUA Ahmed Serag, Paul Aljabar, Serena J. Counsell, James P. Boardman, Joseph V. Hajnal, Daniel Rueckert
2011	J	`jnl`	A dynamic 4D probabilistic atlas of the developing brain. NeuroImage Maria Kuklisova-Murgasova, Paul Aljabar, Latha Srinivasan, Serena J. Counsell, Valentina Doria, Ahmed Serag, Ioannis S. Gousias, James P. Boardman, Mary A. Rutherford, A. David Edwards, Joseph V. Hajnal, Daniel Rueckert
2011	—	`conf`	Construction of a 4D atlas of the developing brain using non-rigid registration. ISBI Ahmed Serag, Paul Aljabar, Serena J. Counsell, James P. Boardman, Joseph V. Hajnal, Daniel Rueckert
2011	—	`conf`	Tracking developmental changes in subcortical structures of the preterm brain using multi-modal MRI. ISBI Ahmed Serag, Paul Aljabar, Serena J. Counsell, James P. Boardman, Joseph V. Hajnal, Daniel Rueckert
2010	J	`jnl`	A common neonatal image phenotype predicts adverse neurodevelopmental outcome in children born preterm. NeuroImage James P. Boardman, C. Craven, S. Valappil, Serena J. Counsell, Leigh Dyet, Daniel Rueckert, Paul Aljabar, Mary A. Rutherford, A. T. M. Chew, Joanna M. Allsop, Frances M. Cowan, A. David Edwards
2010	J	`jnl`	An optimised tract-based spatial statistics protocol for neonates: Applications to prematurity and chronic lung disease. NeuroImage Gareth Ball, Serena J. Counsell, Mustafa Anjari, Nazakat Merchant, Tomoki Arichi, Valentina Doria, Mary A. Rutherford, A. David Edwards, Daniel Rueckert, James P. Boardman
2010	—	`conf`	Combining Morphological Information in a Manifold Learning Framework: Application to Neonatal MRI. MICCAI (3) Paul Aljabar, Robin Wolz, Latha Srinivasan, Serena J. Counsell, James P. Boardman, Maria Murgasova, Valentina Doria, Mary A. Rutherford, A. David Edwards, Joseph V. Hajnal
2010	J	`jnl`	Somatosensory cortical activation identified by functional MRI in preterm and term infants. NeuroImage Tomoki Arichi, A. Moraux, A. Melendez, Valentina Doria, M. Groppo, Nazakat Merchant, S. Combs, Etienne Burdet, David J. Larkman, Serena J. Counsell, Christian F. Beckmann, A. David Edwards
2007	J	`jnl`	A multivariate statistical analysis of the developing human brain in preterm infants. Image Vis. Comput. Carlos E. Thomaz, James P. Boardman, Serena J. Counsell, Derek L. G. Hill, Joseph V. Hajnal, A. David Edwards, Mary A. Rutherford, Duncan Fyfe Gillies, Daniel Rueckert
2007	J	`jnl`	Diffusion tensor imaging with tract-based spatial statistics reveals local white matter abnormalities in preterm infants. NeuroImage Mustafa Anjari, Latha Srinivasan, Joanna M. Allsop, Joseph V. Hajnal, Mary A. Rutherford, A. David Edwards, Serena J. Counsell
2007	—	`conf`	Groupwise Combined Segmentation and Registration for Atlas Construction. MICCAI (1) Kanwal K. Bhatia, Paul Aljabar, James P. Boardman, Latha Srinivasan, Maria Murgasova, Serena J. Counsell, Mary A. Rutherford, Joseph V. Hajnal, A. David Edwards, Daniel Rueckert
2007	—	`conf`	In-utero Three Dimension High Resolution Fetal Brain Diffusion Tensor Imaging. MICCAI (1) Shuzhou Jiang, Hui Xue, Serena J. Counsell, Mustafa Anjari, Joanna M. Allsop, Mary A. Rutherford, Daniel Rueckert, Joseph V. Hajnal
2007	J	`jnl`	Thalamo-cortical connectivity in children born preterm mapped using probabilistic magnetic resonance tractography. NeuroImage Serena J. Counsell, Leigh Dyet, David J. Larkman, Rita Gouveia Nunes, James P. Boardman, Joanna M. Allsop, Julie Fitzpatrick, Latha Srinivasan, Frances M. Cowan, Joseph V. Hajnal, Mary A. Rutherford, A. David Edwards
2006	B	`conf`	A whole brain morphometric analysis of changes associated with pre-term birth. Image Processing Carlos E. Thomaz, James P. Boardman, Serena J. Counsell, Derek L. G. Hill, Joseph V. Hajnal, A. David Edwards, Mary A. Rutherford, Duncan Fyfe Gillies, Daniel Rueckert
2006	J	`jnl`	Abnormal deep grey matter development following preterm birth detected using deformation-based morphometry. NeuroImage James P. Boardman, Serena J. Counsell, Daniel Rueckert, Olga Kapellou, Kanwal K. Bhatia, Paul Aljabar, Joseph V. Hajnal, Joanna M. Allsop, Mary A. Rutherford, A. David Edwards
2006	J	`jnl`	The effect of preterm birth on neonatal cerebral vasculature studied with magnetic resonance angiography at 3 Tesla. NeuroImage Christina Malamateniou, Serena J. Counsell, Joanna M. Allsop, Julie Fitzpatrick, Latha Srinivasan, Frances M. Cowan, Joseph V. Hajnal, Mary A. Rutherford
2003	—	`conf`	An Evaluation of Deformation-Based Morphometry Applied to the Developing Human Brain and Detection of Volumetric Changes Associated with Preterm Birth. MICCAI (1) James P. Boardman, Kanwal K. Bhatia, Serena J. Counsell, Joanna M. Allsop, Olga Kapellou, Mary A. Rutherford, A. David Edwards, Joseph V. Hajnal, Daniel Rueckert