Sebastien Roch

44 papers A* 2B 4Journal 37Unranked 1

Year	Rank	Type	Title / Venue / Authors
2025	A*	`conf`	Sample Complexity of Branch-length Estimation by Maximum Likelihood. ICML David Clancy Jr., Hanbaek Lyu, Sebastien Roch
2023	J	`jnl`	Expanding the Class of Global Objective Functions for Dissimilarity-Based Hierarchical Clustering. J. Classif. Sebastien Roch
2023	J	`jnl`	QR-STAR: A Polynomial-Time Statistically Consistent Method for Rooting Species Trees Under the Coalescent. J. Comput. Biol. Yasamin Tabatabaee, Sebastien Roch, Tandy J. Warnow
2022	J	`jnl`	Expanding the class of global objective functions for dissimilarity-based hierarchical clustering. CoRR Sebastien Roch
2022	J	`jnl`	Inconsistency of Triplet-Based and Quartet-Based Species Tree Estimation under Intralocus Recombination. J. Comput. Biol. Max Hill, Sebastien Roch
2022	B	`conf`	On the Effect of Intralocus Recombination on Triplet-Based Species Tree Estimation. RECOMB Max Hill, Sebastien Roch
2022	J	`jnl`	Pairwise sequence alignment at arbitrarily large evolutionary distance. CoRR Brandon Legried, Sebastien Roch
2021	J	`jnl`	Estimating Graph Dimension with Cross-validated Eigenvalues. CoRR Fan Chen, Sebastien Roch, Karl Rohe, Shuqi Yu
2020	J	`jnl`	Impossibility of phylogeny reconstruction from k-mer counts. CoRR Wai-Tong Louis Fan, Brandon Legried, Sebastien Roch
2018	J	`jnl`	Asymptotic Seed Bias in Respondent-driven Sampling. CoRR Yuling Yan, Bret M. Hanlon, Sebastien Roch, Karl Rohe
2018	B	`conf`	Circular Networks from Distorted Metrics. RECOMB Sebastien Roch, Kun-Chieh Wang
2018	J	`jnl`	Long-branch attraction in species tree estimation: inconsistency of partitioned likelihood and topology-based summary methods. CoRR Sebastien Roch, Michael Nute, Tandy J. Warnow
2018	J	`jnl`	On the variance of internode distance under the multispecies coalescent. CoRR Sebastien Roch
2018	J	`jnl`	Reducing Seed Bias in Respondent-Driven Sampling by Estimating Block Transition Probabilities. CoRR Yilin Zhang, Karl Rohe, Sebastien Roch
2018	J	`jnl`	Species Tree Estimation Using ASTRAL: How Many Genes Are Enough? IEEE ACM Trans. Comput. Biol. Bioinform. Shubhanshu Shekhar, Sebastien Roch, Siavash Mirarab
2017	J	`jnl`	Circular Networks from Distorted Metrics. CoRR Sebastien Roch, Kun-Chieh Wang
2017	J	`jnl`	Coalescent-based species tree estimation: a stochastic Farris transform. CoRR Gautam Dasarathy, Elchanan Mossel, Robert D. Nowak, Sebastien Roch
2017	J	`jnl`	Critical threshold for ancestral reconstruction by maximum parsimony on general phylogenies. CoRR Sebastien Roch, Kun-Chieh Wang
2017	J	`jnl`	Efficient and consistent inference of ancestral sequences in an evolutionary model with insertions and deletions under dense taxon sampling. CoRR Wai-Tong Fan, Sebastien Roch
2017	J	`jnl`	Generalized least squares can overcome the critical threshold in respondent-driven sampling. CoRR Sebastien Roch, Karl Rohe
2017	J	`jnl`	Necessary and sufficient conditions for consistent root reconstruction in Markov models on trees. CoRR Wai-Tong Fan, Sebastien Roch
2017	B	`conf`	Species Tree Estimation Using ASTRAL: How Many Genes Are Enough? RECOMB Shubhanshu Shekhar, Sebastien Roch, Siavash Mirarab
2017	J	`jnl`	Species tree estimation using ASTRAL: how many genes are enough? CoRR Shubhanshu Shekhar, Sebastien Roch, Siavash Mirarab
2016	A*	`conf`	Species Trees from Gene Trees Despite a High Rate of Lateral Genetic Transfer: A Tight Bound (Extended Abstract). SODA Constantinos Daskalakis, Sebastien Roch
2014	J	`jnl`	Data Requirement for Phylogenetic Inference from Multiple Loci: A New Distance Method. CoRR Gautam Dasarathy, Robert D. Nowak, Sebastien Roch
2014	J	`jnl`	Likelihood-based tree reconstruction on a concatenation of alignments can be positively misleading. CoRR Sebastien Roch, Mike A. Steel
2014	J	`jnl`	Phase transition on the convergence rate of parameter estimation under an Ornstein-Uhlenbeck diffusion on a tree. CoRR Cécile Ané, Lam Si Tung Ho, Sebastien Roch
2013	J	`jnl`	Recovering the Treelike Trend of Evolution Despite Extensive Lateral Genetic Transfer: A Probabilistic Analysis. J. Comput. Biol. Sebastien Roch, Sagi Snir
2012	J	`jnl`	An analytical comparison of coalescent-based multilocus methods: The three-taxon case CoRR Sebastien Roch
2012	—	`conf`	On Fixed-Price Marketing for Goods with Positive Network Externalities. WINE Vahab S. Mirrokni, Sebastien Roch, Mukund Sundararajan
2012	B	`conf`	Recovering the Tree-Like Trend of Evolution Despite Extensive Lateral Genetic Transfer: A Probabilistic Analysis. RECOMB Sebastien Roch, Sagi Snir
2012	J	`jnl`	Recovering the tree-like trend of evolution despite extensive lateral genetic transfer: A probabilistic analysis CoRR Sebastien Roch, Sagi Snir
2011	J	`jnl`	Identifiability and inference of non-parametric rates-across-sites models on large-scale phylogenies. CoRR Elchanan Mossel, Sebastien Roch
2011	J	`jnl`	Phase Transition in Distance-Based Phylogeny Reconstruction CoRR Sebastien Roch
2011	J	`jnl`	Phylogenetic mixtures: Concentration of measure in the large-tree limit. CoRR Elchanan Mossel, Sebastien Roch
2010	J	`jnl`	On the inference of large phylogenies with long branches: How long is too long? CoRR Elchanan Mossel, Sebastien Roch, Allan Sly
2009	J	`jnl`	Reconstruction on Trees: Exponential Moment Bounds for Linear Estimators. CoRR Yuval Peres, Sebastien Roch
2009	J	`jnl`	Sequence-Length Requirement of Distance-Based Phylogeny Reconstruction: Breaking the Polynomial Barrier. CoRR Sebastien Roch
2008	J	`jnl`	Phylogenies without Branch Bounds: Contracting the Short, Pruning the Deep. CoRR Constantinos Daskalakis, Elchanan Mossel, Sebastien Roch
2008	J	`jnl`	Shrinkage Effect in Ancestral Maximum Likelihood. CoRR Elchanan Mossel, Sebastien Roch, Mike A. Steel
2007	J	`jnl`	First to Market is not Everything: an Analysis of Preferential Attachment with Fitness. CoRR Christian Borgs, Jennifer T. Chayes, Constantinos Daskalakis, Sebastien Roch
2006	J	`jnl`	On the Submodularity of Influence in Social Networks. CoRR Elchanan Mossel, Sebastien Roch
2006	J	`jnl`	The Kesten-Stigum Reconstruction Bound Is Tight for Roughly Symmetric Binary Channels. CoRR Christian Borgs, Jennifer T. Chayes, Elchanan Mossel, Sebastien Roch
2005	J	`jnl`	Evolutionary Trees and the Ising Model on the Bethe Lattice: a Proof of Steel's Conjecture. CoRR Constantinos Daskalakis, Elchanan Mossel, Sebastien Roch