Sebastian Funk

17 papers C 2Journal 15
YearRankTypeTitle / Venue / Authors
2024 J jnl
Best practices for estimating and reporting epidemiological delay distributions of infectious diseases.
PLoS Comput. Biol.
Kelly Charniga, Sang Woo Park, Andrei R. Akhmetzhanov, Anne Cori, Jonathan Dushoff, Sebastian Funk, Katelyn M. Gostic, Natalie M. Linton, Adrian Lison, Christopher E. Overton, Juliet R. C. Pulliam, Thomas Ward, Simon Cauchemez, Sam Abbott
2024 C conf
Live Product Line Engineering Using Density-Based Clustering of CAD Models.
IEA/AIE
Sebastian Funk, Christoph Legat, Axel Busboom
2023 J jnl
Collaborative nowcasting of COVID-19 hospitalization incidences in Germany.
PLoS Comput. Biol.
Daniel Wolffram, Sam Abbott, Matthias an der Heiden, Sebastian Funk, Felix Günther, Davide Hailer, Stefan Heyder, Thomas Hotz, Jan van de Kassteele, Helmut Küchenhoff, Sören Müller-Hansen, Diellë Syliqi, Alexander Ullrich, Maximilian Weigert, Melanie Schienle, Johannes Bracher
2023 J jnl
Evaluating the use of social contact data to produce age-specific short-term forecasts of SARS-CoV-2 incidence in England.
PLoS Comput. Biol.
James D. Munday, Sam Abbott, Sophie Meakin, Sebastian Funk
2023 J jnl
Scoring epidemiological forecasts on transformed scales.
PLoS Comput. Biol.
Nikos I. Bosse, Sam Abbott, Anne Cori, Edwin van Leeuwen, Johannes Bracher, Sebastian Funk
2023 J jnl
Why are different estimates of the effective reproductive number so different? A case study on COVID-19 in Germany.
PLoS Comput. Biol.
Elisabeth K. Brockhaus, Daniel Wolffram, Tanja Stadler, Michael Osthege, Tanmay Mitra, Jonas M. Littek, Ekaterina A. Krymova, Anna J. Klesen, Jana S. Huisman, Stefan Heyder, Laura Marie Helleckes, Matthias an der Heiden, Sebastian Funk, Sam Abbott, Johannes Bracher
2022 J jnl
Comparing human and model-based forecasts of COVID-19 in Germany and Poland.
PLoS Comput. Biol.
Nikos I. Bosse, Sam Abbott, Johannes Bracher, Habakuk Hain, Billy J. Quilty, Mark Jit, Edwin van Leeuwen, Anne Cori, Sebastian Funk
2022 J jnl
Measuring the unknown: An estimator and simulation study for assessing case reporting during epidemics.
PLoS Comput. Biol.
Christopher I. Jarvis, Amy Gimma, Flavio Finger, Tim P. Morris, Jennifer A. Thompson, Olivier Le Polain de Waroux, W. John Edmunds, Sebastian Funk, Thibaut Jombart
2021 J jnl
Correction: Practical considerations for measuring the effective reproductive number, Rt.
PLoS Comput. Biol.
Katelyn M. Gostic, Lauren McGough, Edward B. Baskerville, Sam Abbott, Keya Joshi, Christine Tedijanto, Rebecca Kahn, Rene Niehus, James A. Hay, Pablo M. De Salazar, Joel Hellewell, Sophie Meakin, James D. Munday, Nikos I. Bosse, Katharine Sherratt, Robin N. Thompson, Laura F. White, Jana S. Huisman, Jérémie Scire, Sebastian Bonhoeffer, Tanja Stadler, Jacco Wallinga, Sebastian Funk, Marc Lipsitch, Sarah Cobey
2021 J jnl
covidregionaldata: Subnational data for COVID-19 epidemiology.
J. Open Source Softw.
Joseph Palmer, Katharine Sherratt, Richard Martin-Nielson, Jonnie Bevan, Hamish Gibbs, LSHTM CMMID COVID-19 Working Group, Sebastian Funk, Sam Abbott
2020 J jnl
Practical considerations for measuring the effective reproductive number, Rt.
PLoS Comput. Biol.
Katelyn M. Gostic, Lauren McGough, Edward B. Baskerville, Sam Abbott, Keya Joshi, Christine Tedijanto, Rebecca Kahn, Rene Niehus, James A. Hay, Pablo M. De Salazar, Joel Hellewell, Sophie Meakin, James D. Munday, Nikos I. Bosse, Katharine Sherratt, Robin N. Thompson, Laura F. White, Jana S. Huisman, Jérémie Scire, Sebastian Bonhoeffer, Tanja Stadler, Jacco Wallinga, Sebastian Funk, Marc Lipsitch, Sarah Cobey
2019 J jnl
Assessing the performance of real-time epidemic forecasts: A case study of Ebola in the Western Area region of Sierra Leone, 2014-15.
PLoS Comput. Biol.
Sebastian Funk, Anton Camacho, Adam J. Kucharski, Rachel Lowe, Rosalind M. Eggo, W. John Edmunds
2019 J jnl
Fine-scale family structure shapes influenza transmission risk in households: Insights from primary schools in Matsumoto city, 2014/15.
PLoS Comput. Biol.
Akira Endo, Mitsuo Uchida, Adam J. Kucharski, Sebastian Funk
2017 J jnl
A mechanistic spatio-temporal framework for modelling individual-to-individual transmission - With an application to the 2014-2015 West Africa Ebola outbreak.
PLoS Comput. Biol.
Max S. Y. Lau, Gavin J. Gibson, Hola Adrakey, Amanda McClelland, Steven Riley, Jon Zelner, George Streftaris, Sebastian Funk, C. Jessica E. Metcalf, Benjamin D. Dalziel, Bryan T. Grenfell
2013 J jnl
Identifying Transmission Cycles at the Human-Animal Interface: The Role of Animal Reservoirs in Maintaining Gambiense Human African Trypanosomiasis.
PLoS Comput. Biol.
Sebastian Funk, Hiroshi Nishiura, Hans Heesterbeek, W. John Edmunds, Francesco Checchi
2013 J jnl
Word usage mirrors community structure in the online social network Twitter.
EPJ Data Sci.
John Bryden, Sebastian Funk, Vincent A. A. Jansen
2010 C conf
Stability in Flux - Group Dynamics in Adaptive Networks.
ALIFE
Nicholas Geard, John Bryden, Sebastian Funk, Vincent A. A. Jansen, Seth Bullock