Sebastian Fernandez Alberti

11 papers Journal 11
YearRankTypeTitle / Venue / Authors
2025 J jnl
Tuning Electronic Relaxation of Nanorings Through Their Interlocking.
J. Comput. Chem.
Laura Alfonso-Hernandez, Victor M. Freixas, Tammie Gibson, Sergei Tretiak, Sebastian Fernandez Alberti
2022 J jnl
Analysis of changes of cavity volumes in predefined directions of protein motions and cavity flexibility.
J. Comput. Chem.
German P. Barletta, Matias Barletta, Tadeo E. Saldaño, Sebastian Fernandez Alberti
2022 J jnl
Impact of protein conformational diversity on AlphaFold predictions.
Bioinform.
Tadeo E. Saldaño, Nahuel Escobedo, Julia Marchetti, Diego Javier Zea, Juan Mac Donagh, Ana Julia Velez Rueda, Eduardo Gonik, Agustina García Melani, Julieta Novomisky Nechcoff, Martín N. Salas, Tomás Peters, Nicolás Demitroff, Sebastian Fernandez Alberti, Nicolas Palopoli, María Silvina Fornasari, Gustavo D. Parisi
2022 J jnl
Modeling excited-state molecular dynamics beyond the Born-Oppenheimer regime.
Nat. Comput. Sci.
Tammie R. Nelson, Sebastian Fernandez Alberti, Sergei Tretiak
2021 J jnl
RepeatsDB in 2021: improved data and extended classification for protein tandem repeat structures.
Nucleic Acids Res.
Lisanna Paladin, Martina Bevilacqua, Sara Errigo, Damiano Piovesan, Ivan Micetic, Marco Necci, Alexander Miguel Monzon, Maria Laura Fabre, José Luis López, Juliet F. Nilsson, Javier Ríos, Pablo Lorenzano Menna, Maia Cabrera, Martin Gonzalez Buitron, Mariane Gonçalves Kulik, Sebastian Fernandez Alberti, María Silvina Fornasari, Gustavo D. Parisi, Antonio Lagares, Layla Hirsh, Miguel A. Andrade-Navarro, Andrey V. Kajava, Silvio C. E. Tosatto
2020 J jnl
Exploring Conformational Space with Thermal Fluctuations Obtained by Normal-Mode Analysis.
J. Chem. Inf. Model.
Tadeo E. Saldaño, Victor M. Freixas, Silvio C. E. Tosatto, Gustavo D. Parisi, Sebastian Fernandez Alberti
2019 J jnl
Fatty Acid and Retinol-Binding Protein: Unusual Protein Conformational and Cavity Changes Dictated by Ligand Fluctuations.
J. Chem. Inf. Model.
German P. Barletta, Gisela R. Franchini, Betina Córsico, Sebastian Fernandez Alberti
2018 J jnl
Dynamics fingerprints of active conformers of epidermal growth factor receptor kinase.
J. Comput. Chem.
German P. Barletta, Marcia Anahi Hasenahuer, María Silvina Fornasari, Gustavo D. Parisi, Sebastian Fernandez Alberti
2017 J jnl
Conformational diversity analysis reveals three functional mechanisms in proteins.
PLoS Comput. Biol.
Alexander Miguel Monzon, Diego J. Zea, María Silvina Fornasari, Tadeo E. Saldaño, Sebastian Fernandez Alberti, Silvio C. E. Tosatto, Gustavo D. Parisi
2016 J jnl
Evolutionary Conserved Positions Define Protein Conformational Diversity.
PLoS Comput. Biol.
Tadeo E. Saldaño, Alexander Miguel Monzon, Gustavo D. Parisi, Sebastian Fernandez Alberti
2011 J jnl
PCDB: a database of protein conformational diversity.
Nucleic Acids Res.
Ezequiel I. Juritz, Sebastian Fernandez Alberti, Gustavo D. Parisi