Saâd Jbabdi - RankMe

68 papers Journal 60Unranked 8

Year	Rank	Type	Title / Venue / Authors
2024	J	`jnl`	Learning Label Refinement and Threshold Adjustment for Imbalanced Semi-Supervised Learning. CoRR Zeju Li, Ying-Qiu Zheng, Chen Chen, Saâd Jbabdi
2023	—	`conf`	A Transfer Learning Approach to Localising a Deep Brain Stimulation Target. MICCAI (9) Ying-Qiu Zheng, Harith Akram, Stephen M. Smith, Saâd Jbabdi
2023	J	`jnl`	Tensor image registration library: Deformable registration of stand-alone histology images to whole-brain post-mortem MRI data. NeuroImage István N. Huszár, Menuka Pallebage-Gamarallage, Sarah Bangerter-Christensen, Hannah Brooks, Sean P. Fitzgibbon, Sean Foxley, Marlies Hiemstra, Amy F. D. Howard, Saâd Jbabdi, Daniel Z. L. Kor, Anna Leonte, Jeroen Mollink, Adele Smart, Benjamin C. Tendler, Martin R. Turner, Olaf Ansorge, Karla L. Miller, Mark Jenkinson
2022	J	`jnl`	Accurate predictions of individual differences in task-evoked brain activity from resting-state fMRI using a sparse ensemble learner. NeuroImage Ying-Qiu Zheng, Seyedeh-Rezvan Farahibozorg, Weikang Gong, Hossein Rafipoor, Saâd Jbabdi, Stephen M. Smith
2022	J	`jnl`	An automated pipeline for extracting histological stain area fraction for voxelwise quantitative MRI-histology comparisons. NeuroImage Daniel Z. L. Kor, Saâd Jbabdi, István N. Huszár, Jeroen Mollink, Benjamin C. Tendler, Sean Foxley, Chaoyue Wang, Connor Scott, Adele Smart, Olaf Ansorge, Menuka Pallebage-Gamarallage, Karla L. Miller, Amy F. D. Howard
2022	—	`conf`	Constrained Self-supervised Method with Temporal Ensembling for Fiber Bundle Detection on Anatomic Tracing Data. MOVI@MICCAI Vaanathi Sundaresan, Julia F. Lehman, Sean P. Fitzgibbon, Saâd Jbabdi, Suzanne N. Haber, Anastasia Yendiki
2022	J	`jnl`	Constrained self-supervised method with temporal ensembling for fiber bundle detection on anatomic tracing data. CoRR Vaanathi Sundaresan, Julia F. Lehman, Sean P. Fitzgibbon, Saâd Jbabdi, Suzanne N. Haber, Anastasia Yendiki
2022	J	`jnl`	Estimating axial diffusivity in the NODDI model. NeuroImage Amy F. D. Howard, Michiel Cottaar, Mark Drakesmith, Qiuyun Fan, Susie Yi Huang, Derek K. Jones, Frederik J. Lange, Jeroen Mollink, Suryanarayana Umesh Rudrapatna, Qiyuan Tian, Karla L. Miller, Saâd Jbabdi
2022	J	`jnl`	Identifying microstructural changes in diffusion MRI; How to circumvent parameter degeneracy. NeuroImage Hossein Rafipoor, Ying-Qiu Zheng, Ludovica Griffanti, Saâd Jbabdi, Michiel Cottaar
2021	J	`jnl`	Clinical applications of magnetic resonance imaging based functional and structural connectivity. NeuroImage Chengyuan Wu, Francisca Ferreira, Michael D. Fox, Noam Harel, Jona A. Hattangadi-Gluth, Andreas Horn, Saâd Jbabdi, Joshua Kahan, Ashwini Oswal, Sameer A. Sheth, Yanmei Tie, Vejay Vakharia, Ludvic U. Zrinzo, Harith Akram
2021	J	`jnl`	Hierarchical modelling of functional brain networks in population and individuals from big fMRI data. NeuroImage Seyedeh-Rezvan Farahibozorg, Janine D. Bijsterbosch, Weikang Gong, Saâd Jbabdi, Stephen M. Smith, Samuel J. Harrison, Mark W. Woolrich
2021	J	`jnl`	Modelling white matter in gyral blades as a continuous vector field. NeuroImage Michiel Cottaar, Matteo Bastiani, Nikhil Boddu, Matthew F. Glasser, Suzanne N. Haber, David C. Van Essen, Stamatios N. Sotiropoulos, Saâd Jbabdi
2020	J	`jnl`	Improved fibre dispersion estimation using b-tensor encoding. NeuroImage Michiel Cottaar, Filip Szczepankiewicz, Matteo Bastiani, Moisés Hernández-Fernández, Stamatios N. Sotiropoulos, Markus Nilsson, Saâd Jbabdi
2020	J	`jnl`	Non-negative data-driven mapping of structural connections with application to the neonatal brain. NeuroImage Elinor Thompson, Ali Reza Mohammadi-Nejad, Emma C. Robinson, Jesper L. R. Andersson, Saâd Jbabdi, Matthew F. Glasser, Matteo Bastiani, Stamatios N. Sotiropoulos
2020	J	`jnl`	Towards HCP-Style macaque connectomes: 24-Channel 3T multi-array coil, MRI sequences and preprocessing. NeuroImage Joonas A. A. Autio, Matthew F. Glasser, Takayuki Ose, Chad J. Donahue, Matteo Bastiani, Masahiro Ohno, Yoshihiko Kawabata, Yuta Urushibata, Katsutoshi Murata, Kantaro Nishigori, Masataka Yamaguchi, Yuki Hori, Atsushi Yoshida, Yasuhiro Go, Timothy S. Coalson, Saâd Jbabdi, Stamatios N. Sotiropoulos, Henry Kennedy, Takuya Hayashi
2020	J	`jnl`	Transient spectral events in resting state MEG predict individual task responses. NeuroImage Robert Becker, Diego Vidaurre, Andrew J. Quinn, Romesh G. Abeysuriya, Owen Parker Jones, Saâd Jbabdi, Mark W. Woolrich
2020	J	`jnl`	Use of multi-flip angle measurements to account for transmit inhomogeneity and non-Gaussian diffusion in DW-SSFP. NeuroImage Benjamin C. Tendler, Sean Foxley, Moisés Hernández-Fernández, Michiel Cottaar, Connor Scott, Olaf Ansorge, Karla L. Miller, Saâd Jbabdi
2020	J	`jnl`	XTRACT - Standardised protocols for automated tractography in the human and macaque brain. NeuroImage Shaun Warrington, Katherine L. Bryant, Alexandre A. Khrapitchev, Jérôme Sallet, Marina Charquero-Ballester, Gwenaëlle Douaud, Saâd Jbabdi, Rogier B. Mars, Stamatios N. Sotiropoulos
2019	J	`jnl`	Automated processing pipeline for neonatal diffusion MRI in the developing Human Connectome Project. NeuroImage Matteo Bastiani, Jesper L. R. Andersson, Lucilio Cordero-Grande, Maria Murgasova, Jana Hutter, Anthony N. Price, Antonios Makropoulos, Sean P. Fitzgibbon, Emer J. Hughes, Daniel Rueckert, Suresh Victor, Mary A. Rutherford, A. David Edwards, Stephen M. Smith, Jacques-Donald Tournier, Joseph V. Hajnal, Saâd Jbabdi, Stamatios N. Sotiropoulos
2019	J	`jnl`	Automated quality control for within and between studies diffusion MRI data using a non-parametric framework for movement and distortion correction. NeuroImage Matteo Bastiani, Michiel Cottaar, Sean P. Fitzgibbon, Sana Suri, Fidel Alfaro-Almagro, Stamatios N. Sotiropoulos, Saâd Jbabdi, Jesper L. R. Andersson
2019	J	`jnl`	Joint modelling of diffusion MRI and microscopy. NeuroImage Amy F. D. Howard, Jeroen Mollink, Michiel Kleinnijenhuis, Menuka Pallebage-Gamarallage, Matteo Bastiani, Michiel Cottaar, Karla L. Miller, Saâd Jbabdi
2019	J	`jnl`	Using GPUs to accelerate computational diffusion MRI: From microstructure estimation to tractography and connectomes. NeuroImage Moisés Hernández-Fernández, István Zoltan Reguly, Saâd Jbabdi, Michael B. Giles, Stephen M. Smith, Stamatios N. Sotiropoulos
2018	—	`conf`	A Machine Learning Approach to Diffusion MRI Partial Volume Estimation. SASHIMI@MICCAI Emmanuel Vallée, Wenchuan Wu, Francesca Galassi, Saâd Jbabdi, Stephen M. Smith
2018	J	`jnl`	A biophysical model of dynamic balancing of excitation and inhibition in fast oscillatory large-scale networks. PLoS Comput. Biol. Romesh G. Abeysuriya, Jonathan Hadida, Stamatios N. Sotiropoulos, Saâd Jbabdi, Robert Becker, Benjamin A. E. Hunt, Matthew J. Brookes, Mark W. Woolrich
2018	J	`jnl`	A gyral coordinate system predictive of fibre orientations. NeuroImage Michiel Cottaar, Matteo Bastiani, Charles Chen, Krikor Dikranian, David C. Van Essen, Timothy Edward John Behrens, Stamatios N. Sotiropoulos, Saâd Jbabdi
2018	J	`jnl`	Bayesian Optimisation of Large-Scale Biophysical Networks. NeuroImage Jonathan Hadida, Stamatios N. Sotiropoulos, Romesh G. Abeysuriya, Mark W. Woolrich, Saâd Jbabdi
2018	J	`jnl`	Concurrent white matter bundles and grey matter networks using independent component analysis. NeuroImage Jonathan O'Muircheartaigh, Saâd Jbabdi
2018	J	`jnl`	Image processing and Quality Control for the first 10, 000 brain imaging datasets from UK Biobank. NeuroImage Fidel Alfaro-Almagro, Mark Jenkinson, Neal K. Bangerter, Jesper L. R. Andersson, Ludovica Griffanti, Gwenaëlle Douaud, Stamatios N. Sotiropoulos, Saâd Jbabdi, Moisés Hernández-Fernández, Emmanuel Vallée, Diego Vidaurre, Matthew A. Webster, Paul McCarthy, Christopher Rorden, Alessandro Daducci, Daniel C. Alexander, Hui Zhang, Iulius Dragonu, Paul M. Matthews, Karla L. Miller, Stephen M. Smith
2018	J	`jnl`	Neuroimage special issue on brain segmentation and parcellation - Editorial. NeuroImage R. Cameron Craddock, Pierre Bellec, Saâd Jbabdi
2017	J	`jnl`	Evaluating fibre orientation dispersion in white matter: Comparison of diffusion MRI, histology and polarized light imaging. NeuroImage Jeroen Mollink, Michiel Kleinnijenhuis, Anne-Marie van Cappellen van Walsum, Stamatios N. Sotiropoulos, Michiel Cottaar, Christopher Mirfin, Mattias P. Heinrich, Mark Jenkinson, Menuka Pallebage-Gamarallage, Olaf Ansorge, Saâd Jbabdi, Karla L. Miller
2017	J	`jnl`	Improved tractography using asymmetric fibre orientation distributions. NeuroImage Matteo Bastiani, Michiel Cottaar, Krikor Dikranian, Aurobrata Ghosh, Hui Zhang, Daniel C. Alexander, Tim E. J. Behrens, Saâd Jbabdi, Stamatios N. Sotiropoulos
2017	J	`jnl`	Subthalamic deep brain stimulation sweet spots and hyperdirect cortical connectivity in Parkinson's disease. NeuroImage Harith Akram, Stamatios N. Sotiropoulos, Saâd Jbabdi, Dejan Georgiev, Philipp Mahlknecht, Jonathan Hyam, Thomas Foltynie, Patricia Limousin, Enrico De Vita, Marjan Jahanshahi, Marwan I. Hariz, John Ashburner, Tim E. J. Behrens, Ludvic U. Zrinzo
2016	J	`jnl`	A probabilistic atlas of the cerebellar white matter. NeuroImage K. M. van Baarsen, Michiel Kleinnijenhuis, Saâd Jbabdi, Stamatios N. Sotiropoulos, J. A. Grotenhuis, Anne-Marie van Cappellen van Walsum
2016	J	`jnl`	Fusion in diffusion MRI for improved fibre orientation estimation: An application to the 3T and 7T data of the Human Connectome Project. NeuroImage Stamatios N. Sotiropoulos, Moisés Hernández-Fernández, An T. Vu, Jesper L. R. Andersson, Steen Moeller, Essa Yacoub, Christophe Lenglet, Kâmil Ugurbil, Timothy Edward John Behrens, Saâd Jbabdi
2015	J	`jnl`	Heritability of fractional anisotropy in human white matter: A comparison of Human Connectome Project and ENIGMA-DTI data. NeuroImage Peter V. Kochunov, Neda Jahanshad, Daniel S. Marcus, Anderson M. Winkler, Emma Sprooten, Thomas E. Nichols, Susan N. Wright, L. Elliot Hong, Binish Patel, Timothy Behrens, Saâd Jbabdi, Jesper L. R. Andersson, Christophe Lenglet, Essa Yacoub, Steen Moeller, Eddie Auerbach, Kâmil Ugurbil, Stamatios N. Sotiropoulos, Rachel M. Brouwer, Bennett A. Landman, Hervé Lemaître, Anouk den Braber, Marcel P. Zwiers, Stuart J. Ritchie, Kimm van Hulzen, Laura Almasy, Joanne E. Curran, Greig I. de Zubicaray, Ravi Duggirala, Peter T. Fox
2015	J	`jnl`	High resolution whole brain diffusion imaging at 7 T for the Human Connectome Project. NeuroImage An T. Vu, Edward J. Auerbach, Christophe Lenglet, Steen Moeller, Stamatios N. Sotiropoulos, Saâd Jbabdi, Jesper L. R. Andersson, Essa Yacoub, Kâmil Ugurbil
2014	J	`jnl`	Improving diffusion-weighted imaging of post-mortem human brains: SSFP at 7 T. NeuroImage Sean Foxley, Saâd Jbabdi, Stuart Clare, Wilfred Lam, Olaf Ansorge, Gwenaëlle Douaud, Karla L. Miller
2014	J	`jnl`	MSM: A new flexible framework for Multimodal Surface Matching. NeuroImage Emma C. Robinson, Saâd Jbabdi, Matthew F. Glasser, Jesper L. R. Andersson, Gregory C. Burgess, Michael P. Harms, Stephen M. Smith, David C. Van Essen, Mark Jenkinson
2013	J	`jnl`	Advances in diffusion MRI acquisition and processing in the Human Connectome Project. NeuroImage Stamatios N. Sotiropoulos, Saâd Jbabdi, Junqian Xu, Jesper L. R. Andersson, Steen Moeller, Edward J. Auerbach, Matthew F. Glasser, Moisés Hernández, Guillermo Sapiro, Mark Jenkinson, David A. Feinberg, Essa Yacoub, Christophe Lenglet, David C. Van Essen, Kâmil Ugurbil, Timothy Edward John Behrens
2013	—	`conf`	Multimodal Surface Matching: Fast and Generalisable Cortical Registration Using Discrete Optimisation. IPMI Emma C. Robinson, Saâd Jbabdi, Jesper L. R. Andersson, Stephen M. Smith, Matthew F. Glasser, David C. Van Essen, Gregory C. Burgess, Michael P. Harms, Deanna M. Barch, Mark Jenkinson
2013	J	`jnl`	Pushing spatial and temporal resolution for functional and diffusion MRI in the Human Connectome Project. NeuroImage Kâmil Ugurbil, Junqian Xu, Edward J. Auerbach, Steen Moeller, An T. Vu, Julio Martin Duarte-Carvajalino, Christophe Lenglet, Xiaoping Wu, Sebastian Schmitter, Pierre-François van de Moortele, John P. Strupp, Guillermo Sapiro, Federico De Martino, Dingxin Wang, Noam Harel, Michael Garwood, Liyong Chen, David A. Feinberg, Stephen M. Smith, Karla L. Miller, Stamatios N. Sotiropoulos, Saâd Jbabdi, Jesper L. R. Andersson, Timothy Edward John Behrens, Matthew F. Glasser, David C. Van Essen, Essa Yacoub
2013	J	`jnl`	RubiX: Combining Spatial Resolutions for Bayesian Inference of Crossing Fibers in Diffusion MRI. IEEE Trans. Medical Imaging Stamatios N. Sotiropoulos, Saâd Jbabdi, Jesper L. R. Andersson, Mark William Woolrich, Kâmil Ugurbil, Timothy Edward John Behrens
2013	J	`jnl`	Spatially constrained hierarchical parcellation of the brain with resting-state fMRI. NeuroImage Thomas Blumensath, Saâd Jbabdi, Matthew F. Glasser, David C. Van Essen, Kâmil Ugurbil, Timothy Edward John Behrens, Stephen M. Smith
2013	J	`jnl`	The minimal preprocessing pipelines for the Human Connectome Project. NeuroImage Matthew F. Glasser, Stamatios N. Sotiropoulos, J. Anthony Wilson, Timothy S. Coalson, Bruce Fischl, Jesper L. R. Andersson, Junqian Xu, Saâd Jbabdi, Matthew A. Webster, Jonathan R. Polimeni, David C. Van Essen, Mark Jenkinson
2012	J	`jnl`	Ball and rackets: Inferring fiber fanning from diffusion-weighted MRI. NeuroImage Stamatios N. Sotiropoulos, Timothy Edward John Behrens, Saâd Jbabdi
2012	J	`jnl`	Diffusion tractography of post-mortem human brains: Optimization and comparison of spin echo and steady-state free precession techniques. NeuroImage Karla L. Miller, Jennifer A. McNab, Saâd Jbabdi, Gwenaëlle Douaud
2012	—	`conf`	Modelling fibre fanning in diffusion-weighted MRI. ISBI Stamatios N. Sotiropoulos, Timothy Edward John Behrens, Saâd Jbabdi
2011	J	`jnl`	Automated Probabilistic Reconstruction of White-Matter Pathways in Health and Disease Using an Atlas of the Underlying Anatomy. Frontiers Neuroinformatics Anastasia Yendiki, Patricia Panneck, Priti Srinivasan, Allison Stevens, Lilla Zöllei, Jean Augustinack, Ruopeng Wang, David H. Salat, Stefan Ehrlich, Tim E. J. Behrens, Saâd Jbabdi, Randy L. Gollub, Bruce Fischl
2011	J	`jnl`	DTI measures in crossing-fibre areas: Increased diffusion anisotropy reveals early white matter alteration in MCI and mild Alzheimer's disease. NeuroImage Gwenaëlle Douaud, Saâd Jbabdi, Timothy Edward John Behrens, Ricarda A. Menke, Achim Gass, Andreas U. Monsch, Anil Rao, Brandon J. Whitcher, Gordon L. Kindlmann, Paul M. Matthews, Stephen M. Smith
2011	J	`jnl`	Diffusion imaging of whole, post-mortem human brains on a clinical MRI scanner. NeuroImage Karla L. Miller, Charlotte J. Stagg, Gwenaëlle Douaud, Saâd Jbabdi, Stephen M. Smith, Timothy Edward John Behrens, Mark Jenkinson, Steven A. Chance, Margaret M. Esiri, Natalie L. Voets, Ned Jenkinson, Tipu Z. Aziz, Martin R. Turner, Heidi Johansen-Berg, Jennifer A. McNab
2011	J	`jnl`	Network analysis detects changes in the contralesional hemisphere following stroke. NeuroImage Jonathan J. Crofts, Desmond J. Higham, Rose Bosnell, Saâd Jbabdi, Paul M. Matthews, T. E. J. Behrens, Heidi Johansen-Berg
2011	J	`jnl`	Tractography: Where Do We Go from Here? Brain Connect. Saâd Jbabdi, Heidi Johansen-Berg
2010	J	`jnl`	Connectivity-based segmentation of the substantia nigra in human and its implications in Parkinson's disease. NeuroImage Ricarda A. Menke, Saâd Jbabdi, Karla L. Miller, Paul M. Matthews, Mojtaba Zarei
2010	J	`jnl`	Crossing fibres in tract-based spatial statistics. NeuroImage Saâd Jbabdi, Timothy Edward John Behrens, Stephen M. Smith
2009	J	`jnl`	Bayesian analysis of neuroimaging data in FSL. NeuroImage Mark William Woolrich, Saâd Jbabdi, Brian Patenaude, Michael A. Chappell, Salima Makni, Timothy Behrens, Christian F. Beckmann, Mark Jenkinson, Stephen M. Smith
2009	J	`jnl`	Determination of the human brainstem respiratory control network and its cortical connections in vivo using functional and structural imaging. NeuroImage Kyle T. S. Pattinson, Georgios D. Mitsis, Ann K. Harvey, Saâd Jbabdi, Sharon Dirckx, Stephen D. Mayhew, Richard Rogers, Irene Tracey, Richard G. Wise
2009	J	`jnl`	High resolution diffusion-weighted imaging in fixed human brain using diffusion-weighted steady state free precession. NeuroImage Jennifer A. McNab, Saâd Jbabdi, Sean C. L. Deoni, Gwenaëlle Douaud, Timothy Edward John Behrens, Karla L. Miller
2009	J	`jnl`	In vivo evidence for the selective subcortical degeneration in Huntington's disease. NeuroImage Gwenaëlle Douaud, Timothy Edward John Behrens, Cyril Poupon, Yann Cointepas, Saâd Jbabdi, Véronique Gaura, Narly Golestani, Pierre Krystkowiak, Christophe Verny, Philippe Damier, Anne-Catherine Bachoud-Lévi, Philippe Hantraye, Philippe Remy
2009	J	`jnl`	MRI characteristics of the substantia nigra in Parkinson's disease: A combined quantitative T1 and DTI study. NeuroImage Ricarda A. Menke, Jan Scholz, Karla L. Miller, Sean C. L. Deoni, Saâd Jbabdi, Paul M. Matthews, Mojtaba Zarei
2009	J	`jnl`	Multiple-subjects connectivity-based parcellation using hierarchical Dirichlet process mixture models. NeuroImage Saâd Jbabdi, Mark William Woolrich, Timothy Edward John Behrens
2008	J	`jnl`	Accurate Anisotropic Fast Marching for Diffusion-Based Geodesic Tractography. Int. J. Biomed. Imaging Saâd Jbabdi, Pierre Bellec, Roberto Toro, Jean Daunizeau, Mélanie Pélégrini-Issac, Habib Benali
2007	J	`jnl`	A Bayesian framework for global tractography. NeuroImage Saâd Jbabdi, Mark W. Woolrich, Jesper L. R. Andersson, T. E. J. Behrens
2007	J	`jnl`	Probabilistic diffusion tractography with multiple fibre orientations: What can we gain? NeuroImage T. E. J. Behrens, Heidi Johansen-Berg, Saâd Jbabdi, Matthew F. S. Rushworth, Mark W. Woolrich
2007	J	`jnl`	Symmetrical event-related EEG/fMRI information fusion in a variational Bayesian framework. NeuroImage Jean Daunizeau, Christophe Grova, Guillaume Marrelec, Jérémie Mattout, Saâd Jbabdi, Mélanie Pélégrini-Issac, Jean-Marc Lina, Habib Benali
2006	J	`jnl`	Identification of large-scale networks in the brain using fMRI. NeuroImage Pierre Bellec, Vincent Perlbarg, Saâd Jbabdi, Mélanie Pélégrini-Issac, Jean-Luc Anton, Julien Doyon, Habib Benali
2004	—	`conf`	A Level Set Method for Building Anatomical Connectivity Paths Between Brain Areas Using DTI. ISBI Saâd Jbabdi, Pierre Bellec, Guillaume Marrelec, Habib Benali
2004	—	`conf`	Identification of A Large-Scale Functional Network In Functional Magnetic Resonance Imaging. ISBI Pierre Bellec, Guillaume Marrelec, Vincent Perlbarg, Saâd Jbabdi, Odile Jolivet, Mélanie Pélégrini-Issac, Habib Benali, Julien Doyon
2004	—	`conf`	Selection of Spatially Independent Components to Explain Functional Connectivity In fMRI. ISBI Vincent Perlbarg, Pierre Bellec, Habib Benali, Guillaume Marrelec, Saâd Jbabdi