Sayoni Das

15 papers Journal 14
YearRankTypeTitle / Venue / Authors
2022 J jnl
Systematic indication extension for drugs using patient stratification insights generated by combinatorial analytics.
Patterns
Sayoni Das, Krystyna Taylor, Simon Beaulah, Steve Gardner
2021 J jnl
CATH functional families predict functional sites in proteins.
Bioinform.
Sayoni Das, Harry M. Scholes, Neeladri Sen, Christine A. Orengo
2021 J jnl
Combinatorial Analysis of Phenotypic and Clinical Risk Factors Associated With Hospitalized COVID-19 Patients.
Frontiers Digit. Health
Sayoni Das, Matthew Pearson, Krystyna Taylor, Veronique Bouchet, Gert Lykke Møller, Taryn O. Hall, Mark Strivens, Kathy T. H. Tzeng, Steve Gardner
2020 J jnl
PDBe-KB: a community-driven resource for structural and functional annotations.
Nucleic Acids Res.
Mihaly Varadi, John M. Berrisford, Mandar S. Deshpande, Sreenath Nair, Aleksandras Gutmanas, David R. Armstrong, Lukás Pravda, Bissan Al-Lazikani, Stephen Anyango, Geoffrey J. Barton, Karel Berka, Tom L. Blundell, Neera Borkakoti, Jose M. Dana, Sayoni Das, Sucharita Dey, Patrizio Di Micco, Franca Fraternali, Toby J. Gibson, Manuela Helmer-Citterich, David Hoksza, Liang-Chin Huang, Rishabh Jain, Harry Jubb, Christos C. Kannas, Natarajan Kannan, Jaroslav Koca, Radoslav Krivák, Manjeet Kumar, Emmanuel D. Levy, Fábio Madeira, M. S. Madhusudhan, Henry J. Martell, Stuart A. MacGowan, Jake E. McGreig, Saqib Mir, Abhik Mukhopadhyay, Luca Parca, Typhaine Paysan-Lafosse, Leandro G. Radusky, António J. M. Ribeiro, Luis Serrano, Ian Sillitoe, Gulzar Singh, Petr Skoda, Radka Svobodová Vareková, Jonathan D. Tyzack, Alfonso Valencia, Eloy D. Villasclaras-Fernández, Wim F. Vranken, Mark N. Wass, Janet M. Thornton, Michael J. E. Sternberg, Christine A. Orengo, Sameer Velankar
2019 J jnl
CATH: expanding the horizons of structure-based functional annotations for genome sequences.
Nucleic Acids Res.
Ian Sillitoe, Natalie L. Dawson, Tony E. Lewis, Sayoni Das, Jonathan G. Lees, Paul Ashford, Adeyelu Tolulope, Harry M. Scholes, Ilya Senatorov, Andra Bujan, Fatima Ceballos Rodriguez-Conde, Benjamin Dowling, Janet M. Thornton, Christine A. Orengo
2019 — ch.
Protein Structure Classification.
Encyclopedia of Bioinformatics and Computational Biology (2)
Natalie L. Dawson, Sayoni Das, Jonathan G. Lees, Christine A. Orengo
2017 J jnl
CATH: an expanded resource to predict protein function through structure and sequence.
Nucleic Acids Res.
Natalie L. Dawson, Tony E. Lewis, Sayoni Das, Jonathan G. Lees, David A. Lee, Paul Ashford, Christine A. Orengo, Ian Sillitoe
2016 J jnl
Functional classification of CATH superfamilies: a domain-based approach for protein function annotation.
Bioinform.
Sayoni Das, David A. Lee, Ian Sillitoe, Natalie L. Dawson, Jonathan G. Lees, Christine A. Orengo
2016 J jnl
Gene3D: expanding the utility of domain assignments.
Nucleic Acids Res.
Su Datt Lam, Natalie L. Dawson, Sayoni Das, Ian Sillitoe, Paul Ashford, David A. Lee, Sonja Lehtinen, Christine A. Orengo, Jonathan G. Lees
2016 J jnl
Novel Computational Protocols for Functionally Classifying and Characterising Serine Beta-Lactamases.
PLoS Comput. Biol.
David A. Lee, Sayoni Das, Natalie L. Dawson, Dragana Dobrijevic, John Ward, Christine A. Orengo
2015 J jnl
CATH FunFHMMer web server: protein functional annotations using functional family assignments.
Nucleic Acids Res.
Sayoni Das, Ian Sillitoe, David A. Lee, Jonathan G. Lees, Natalie L. Dawson, John Ward, Christine A. Orengo
2015 J jnl
CATH: comprehensive structural and functional annotations for genome sequences.
Nucleic Acids Res.
Ian Sillitoe, Tony E. Lewis, Alison L. Cuff, Sayoni Das, Paul Ashford, Natalie L. Dawson, Nicholas Furnham, Roman A. Laskowski, David A. Lee, Jonathan G. Lees, Sonja Lehtinen, Romain A. Studer, Janet M. Thornton, Christine A. Orengo
2015 J jnl
Functional classification of CATH superfamilies: a domain-based approach for protein function annotation.
Bioinform.
Sayoni Das, David A. Lee, Ian Sillitoe, Natalie L. Dawson, Jonathan G. Lees, Christine A. Orengo
2015 J jnl
Highlights from the 1st Student Symposium on Computational Biology and Life Sciences, organised by ISCB Regional Student Group, UK.
PeerJ Prepr.
Farzana Rahman, Rohit Farmer, Sayoni Das, Fatima Vayani, Mehedi Hassan
2014 J jnl
Gene3D: Multi-domain annotations for protein sequence and comparative genome analysis.
Nucleic Acids Res.
Jonathan G. Lees, David A. Lee, Romain A. Studer, Natalie L. Dawson, Ian Sillitoe, Sayoni Das, Corin Yeats, Benoit H. Dessailly, Robert Rentzsch, Christine A. Orengo