Sascha Ott

15 papers B 2Misc 3Journal 10
YearRankTypeTitle / Venue / Authors
2025 J jnl
Integrative systems biology approaches for analyzing microbiome dysbiosis and species interactions.
Briefings Bioinform.
Syed Sabih Ur Rehman, Muhammad Ibtisam Nasar, Cristina S. Mesquita, Souhaila Al Khodor, Richard A. Notebaart, Sascha Ott, Sunil Mundra, Ramesh P. Arasardanam, Khalid Muhammad, Mohammad Tauqeer Alam
2024 J jnl
TimeTeller: A tool to probe the circadian clock as a multigene dynamical system.
PLoS Comput. Biol.
Denise Vlachou, Maria Veretennikova, Laura Usselmann, Vadim Vasilyev, Sascha Ott, Georg A. Bjarnason, Robert Dallmann, Francis Lévi, David A. Rand
2018 J jnl
Bringing numerous methods for expression and promoter analysis to a public cloud computing service.
Bioinform.
Krzysztof Polanski, Bo Gao, Sam A. Mason, Paul Brown, Sascha Ott, Katherine J. Denby, David L. Wild
2014 J jnl
Wigwams: identifying gene modules co-regulated across multiple biological conditions.
Bioinform.
Krzysztof Polanski, Johanna Rhodes, Claire Hill, Peijun Zhang, Dafyd J. Jenkins, Steven J. Kiddle, Aleksey Jironkin, Jim Beynon, Vicky Buchanan-Wollaston, Sascha Ott, Katherine J. Denby
2013 J jnl
MEME-LaB: motif analysis in clusters.
Bioinform.
Paul Brown, Laura Baxter, Richard Hickman, Jim Beynon, Jonathan D. Moore, Sascha Ott
2010 J jnl
An alignment-free model for comparison of regulatory sequences.
Bioinform.
Hashem Koohy, Nigel P. Dyer, John E. Reid, Georgy Koentges, Sascha Ott
2009 J jnl
Transcriptional programs: Modelling higher order structure in transcriptional control.
BMC Bioinform.
John E. Reid, Sascha Ott, Lorenz Wernisch
2007 J jnl
A comparative study of S/MAR prediction tools.
BMC Bioinform.
Kenneth Evans, Sascha Ott, Annika Hansen, Georgy Koentges, Lorenz Wernisch
2007 J jnl
On the complexity of deriving position specific score matrices from positive and negative sequences.
Discret. Appl. Math.
Tatsuya Akutsu, Hideo Bannai, Satoru Miyano, Sascha Ott
2005 J jnl
Superiority of network motifs over optimal networks and an application to the revelation of gene network evolution.
Bioinform.
Sascha Ott, Annika Hansen, Sunyong Kim, Satoru Miyano
2004 Misc conf
Finding Optimal Models for Small Gene Networks.
Pacific Symposium on Biocomputing
Sascha Ott, Seiya Imoto, Satoru Miyano
2003 Misc conf
Intrasplicing - Analysis of Long Intron Sequences.
Pacific Symposium on Biocomputing
Sascha Ott, Yoshinori Tamada, Hideo Bannai, Kenta Nakai, Satoru Miyano
2002 Misc conf
Inferring a Union of Halfspaces from Examples.
COCOON
Tatsuya Akutsu, Sascha Ott
2002 B conf
On the Complexity of Deriving Position Specific Score Matrices from Examples.
CPM
Tatsuya Akutsu, Hideo Bannai, Satoru Miyano, Sascha Ott
1999 B conf
Lower Bounds for Approximating Shortest Superstrings over an Alphabet of Size 2.
WG
Sascha Ott