Sarah Cohen Boulakia

48 papers A* 4A 1B 5Misc 2Journal 16Unranked 10
YearRankTypeTitle / Venue / Authors
2018 — ch.
Biological Metadata Management.
Encyclopedia of Database Systems (2nd ed.)
Zoé Lacroix, Cartik R. Kothari, Peter Mork, Mark D. Wilkinson, Sarah Cohen Boulakia
2018 — ch.
Biological Resource Discovery.
Encyclopedia of Database Systems (2nd ed.)
Zoé Lacroix, Cartik R. Kothari, Peter Mork, Rami Rifaieh, Mark D. Wilkinson, Juliana Freire, Sarah Cohen Boulakia
2018 — conf
Designing Scientific SPARQL Queries Using Autocompletion by Snippets.
eScience
Karima Rafes, Serge Abiteboul, Sarah Cohen Boulakia, Bastien Rance
2018 J jnl
Distributed Management of Scientific Workflows for High-Throughput Plant Phenotyping.
ERCIM News
Christophe Pradal, Sarah Cohen Boulakia, Gaëtan Heidsieck, Esther Pacitti, François Tardieu, Patrick Valduriez
2018 — ch.
Provenance in Scientific Databases.
Encyclopedia of Database Systems (2nd ed.)
Sarah Cohen Boulakia, Wang-Chiew Tan
2017 J jnl
InfraPhenoGrid: A scientific workflow infrastructure for plant phenomics on the Grid.
Future Gener. Comput. Syst.
Christophe Pradal, Simon Artzet, Jérôme Chopard, Dimitri Dupuis, Christian Fournier, Michael Mielewczik, Vincent Nègre, Pascal Neveu, Didier Parigot, Patrick Valduriez, Sarah Cohen Boulakia
2017 J jnl
Scientific workflows for computational reproducibility in the life sciences: Status, challenges and opportunities.
Future Gener. Comput. Syst.
Sarah Cohen Boulakia, Khalid Belhajjame, Olivier Collin, Jérôme Chopard, Christine Froidevaux, Alban Gaignard, Konrad Hinsen, Pierre Larmande, Yvan Le Bras, Frédéric Lemoine, Fabien Mareuil, Hervé Ménager, Christophe Pradal, Christophe Blanchet
2016 — ed.
8th USENIX Workshop on the Theory and Practice of Provenance, TaPP 2016, Washington, D.C., USA, June 8-9, 2016.
TaPP
Sarah Cohen Boulakia
2016 J jnl
Effective and efficient similarity search in scientific workflow repositories.
Future Gener. Comput. Syst.
Johannes Starlinger, Sarah Cohen Boulakia, Sanjeev Khanna, Susan B. Davidson, Ulf Leser
2016 — conf
Représentation systémique multi-échelle des processus biologiques de la bactérie.
IC
Vincent Henry, Arnaud Ferré, Christine Froidevaux, Anne Goelzer, Vincent Fromion, Sarah Cohen Boulakia, Sandra Dérozier, Marc Dinh, Ghislain Fiévet, Stephan Fischer, Jean-François Gibrat, Valentin Loux, Sabine Pérès
2015 — book
Data Integration in the Life Sciences: Scientific Workflows, Provenance, and Ranking.
Sarah Cohen Boulakia
2015 B conf
OpenAlea: scientific workflows combining data analysis and simulation.
SSDBM
Christophe Pradal, Christian Fournier, Patrick Valduriez, Sarah Cohen Boulakia
2015 J jnl
Rank aggregation with ties: Experiments and Analysis.
Proc. VLDB Endow.
Bryan Brancotte, Bo Yang, Guillaume Blin, Sarah Cohen Boulakia, Alain Denise, Sylvie Hamel
2015 Misc conf
Reviewing 741 patients records in two hours with FASTVISU.
AMIA
Jean-Baptiste Escudié, Anne-Sophie Jannot, Eric Zapletal, Sarah Cohen Boulakia, Georgia Malamut, Anita Burgun, Bastien Rance
2014 — conf
ConQuR-Bio: Consensus Ranking with Query Reformulation for Biological Data.
DILS
Bryan Brancotte, Bastien Rance, Alain Denise, Sarah Cohen Boulakia
2014 B conf
DistillFlow: removing redundancy in scientific workflows.
SSDBM
Jiuqiang Chen, Sarah Cohen Boulakia, Christine Froidevaux, Carole A. Goble, Paolo Missier, Alan R. Williams
2014 J jnl
Distilling structure in Taverna scientific workflows: a refactoring approach.
BMC Bioinform.
Sarah Cohen Boulakia, Jiuqiang Chen, Paolo Missier, Carole A. Goble, Alan R. Williams, Christine Froidevaux
2014 — conf
Layer Decomposition: An Effective Structure-Based Approach for Scientific Workflow Similarity.
eScience
Johannes Starlinger, Sarah Cohen Boulakia, Sanjeev Khanna, Susan B. Davidson, Ulf Leser
2014 J jnl
Similarity Search for Scientific Workflows.
Proc. VLDB Endow.
Johannes Starlinger, Bryan Brancotte, Sarah Cohen Boulakia, Ulf Leser
2012 B conf
(Re)Use in Public Scientific Workflow Repositories.
SSDBM
Johannes Starlinger, Sarah Cohen Boulakia, Ulf Leser
2012 — conf
Scientific workflow rewriting while preserving provenance.
eScience
Sarah Cohen Boulakia, Christine Froidevaux, Jiuqiang Chen
2011 J jnl
Gene List significance at-a-glance with GeneValorization.
Bioinform.
Bryan Brancotte, Anne Biton, Isabelle Bernard-Pierrot, François Radvanyi, Fabien Reyal, Sarah Cohen Boulakia
2011 A* conf
Next generation data integration for Life Sciences.
ICDE
Sarah Cohen Boulakia, Ulf Leser
2011 J jnl
Search, adapt, and reuse: the future of scientific workflows.
SIGMOD Rec.
Sarah Cohen Boulakia, Ulf Leser
2011 B conf
Using Medians to Generate Consensus Rankings for Biological Data.
SSDBM
Sarah Cohen Boulakia, Alain Denise, Sylvie Hamel
2009 B conf
BioBrowsing: Making the Most of the Data Available in Entrez.
SSDBM
Sarah Cohen Boulakia, Kevin Masini
2009 — ch.
Biological Metadata Management.
Encyclopedia of Database Systems
Zoé Lacroix, Cartik R. Kothari, Peter Mork, Mark D. Wilkinson, Sarah Cohen Boulakia
2009 — ch.
Biological Resource Discovery.
Encyclopedia of Database Systems
Zoé Lacroix, Cartik R. Kothari, Peter Mork, Rami Rifaieh, Mark D. Wilkinson, Juliana Freire, Sarah Cohen Boulakia
2009 A* conf
Differencing Provenance in Scientific Workflows.
ICDE
Zhuowei Bao, Sarah Cohen Boulakia, Susan B. Davidson, Anat Eyal, Sanjeev Khanna
2009 — conf
On User Views in Scientific Workflow Systems.
SWPM
Susan B. Davidson, Yi Chen, Peng Sun, Sarah Cohen Boulakia
2009 J jnl
PDiffView: Viewing the Difference in Provenance of Workflow Results.
Proc. VLDB Endow.
Zhuowei Bao, Sarah Cohen Boulakia, Susan B. Davidson, Pierrick Girard
2009 — ch.
Provenance in Scientific Databases.
Encyclopedia of Database Systems
Sarah Cohen Boulakia, Wang Chiew Tan
2008 J jnl
Addressing the provenance challenge using ZOOM.
Concurr. Comput. Pract. Exp.
Sarah Cohen Boulakia, Olivier Biton, Shirley Cohen, Susan B. Davidson
2008 — ed.
Data Integration in the Life Sciences, 5th International Workshop, DILS 2008, Evry, France, June 25-27, 2008. Proceedings
DILS
Amos Bairoch, Sarah Cohen Boulakia, Christine Froidevaux
2008 A* conf
Querying and Managing Provenance through User Views in Scientific Workflows.
ICDE
Olivier Biton, Sarah Cohen Boulakia, Susan B. Davidson, Carmem S. Hara
2008 J jnl
Review of the selected proceedings of the Fifth International Workshop on Data Integration in the Life Sciences 2008.
BMC Bioinform.
Amos Bairoch, Sarah Cohen Boulakia, Christine Froidevaux
2008 J jnl
Special Issue: The First Provenance Challenge.
Concurr. Comput. Pract. Exp.
Luc Moreau, Bertram Ludäscher, Ilkay Altintas, Roger S. Barga, Shawn Bowers, Steven P. Callahan, George Chin Jr., Ben Clifford, Shirley Cohen, Sarah Cohen Boulakia, Susan B. Davidson, Ewa Deelman, Luciano A. Digiampietri, Ian T. Foster, Juliana Freire, James Frew, Joe Futrelle, Tara Gibson, Yolanda Gil, Carole A. Goble, Jennifer Golbeck, Paul Groth, David A. Holland, Sheng Jiang, Jihie Kim, David Koop, Ales Krenek, Timothy M. McPhillips, Gaurang Mehta, Simon Miles, Dominic Metzger, Steve Munroe, Jim Myers, Beth Plale, Norbert Podhorszki, Varun Ratnakar, Emanuele Santos, Carlos Eduardo Scheidegger, Karen Schuchardt, Margo I. Seltzer, Yogesh L. Simmhan, Cláudio T. Silva, Peter Slaughter, Eric G. Stephan, Robert Stevens, Daniele Turi, Huy T. Vo, Michael Wilde, Jun Zhao, Yong Zhao
2007 J jnl
BioGuideSRS: querying multiple sources with a user-centric perspective.
Bioinform.
Sarah Cohen Boulakia, Olivier Biton, Susan B. Davidson, Christine Froidevaux
2007 — ed.
Data Integration in the Life Sciences, 4th International Workshop, DILS 2007, Philadelphia, PA, USA, June 27-29, 2007, Proceedings
DILS
Sarah Cohen Boulakia, Val Tannen
2007 J jnl
Provenance in Scientific Workflow Systems.
IEEE Data Eng. Bull.
Susan B. Davidson, Sarah Cohen Boulakia, Anat Eyal, Bertram Ludäscher, Timothy M. McPhillips, Shawn Bowers, Manish Kumar Anand, Juliana Freire
2007 A* conf
Zoom*UserViews: Querying Relevant Provenance in Workflow Systems.
VLDB
Olivier Biton, Sarah Cohen Boulakia, Susan B. Davidson
2006 J jnl
Path-based Systems to Guide Scientists in the Maze of Biological Data Sources.
J. Bioinform. Comput. Biol.
Sarah Cohen Boulakia, Susan B. Davidson, Christine Froidevaux, Zoé Lacroix, Maria-Esther Vidal
2006 Misc conf
Selecting Biological Data Sources and Tools with XPR, a Path Language for RDF.
Pacific Symposium on Biocomputing
Sarah Cohen Boulakia, Christine Froidevaux, Emmanuel Pietriga
2006 — conf
Towards a Model of Provenance and User Views in Scientific Workflows.
DILS
Shirley Cohen, Sarah Cohen Boulakia, Susan B. Davidson
2005 — conf
A User-Centric Framework for Accessing Biological Sources and Tools.
DILS
Sarah Cohen Boulakia, Susan B. Davidson, Christine Froidevaux
2004 — conf
Interrogation de sources biomédicales : prise en compte des préférences de l'utilisateur.
EGC
Sarah Cohen Boulakia, Christine Froidevaux, Séverine Lair
2004 A conf
Preferences for Queries in a Mediator Approach.
ECAI
Alain Bidault, Sarah Cohen Boulakia, Christine Froidevaux
2004 — conf
Selecting biomedical data sources according to user preferences.
ISMB/ECCB (Supplement of Bioinformatics)
Sarah Cohen Boulakia, Séverine Lair, Nicolas Stransky, Stéphane Graziani, François Radvanyi, Emmanuel Barillot, Christine Froidevaux