Sarah A. Teichmann

30 papers A* 1B 2C 1Journal 23Unranked 2
YearRankTypeTitle / Venue / Authors
2026 J jnl
Toward informed batch correction for single-cell transcriptome integration.
Nat. Comput. Sci.
Shuang Li, Malte Lücken, John C. Marioni, Sarah A. Teichmann, Peng He
2025 A* conf
Estimation of single-cell and tissue perturbation effect in spatial transcriptomics via Spatial Causal Disentanglement.
ICLR
Stathis Megas, Daniel G. Chen, Krzysztof Polanski, Moshe Eliasof, Carola-Bibiane Schönlieb, Sarah A. Teichmann
2024 J jnl
Bin2cell reconstructs cells from high resolution Visium HD data.
Bioinform.
Krzysztof Polanski, Raquel Bartolomé-Casado, Ioannis Sarropoulos, Chuan Xu, Nick England, Frode L. Jahnsen, Sarah A. Teichmann, Nadav Yayon
2024 J jnl
Celcomen: spatial causal disentanglement for single-cell and tissue perturbation modeling.
CoRR
Stathis Megas, Daniel G. Chen, Krzysztof Polanski, Moshe Eliasof, Carola-Bibiane Schönlieb, Sarah A. Teichmann
2022 J jnl
Expression Atlas update: gene and protein expression in multiple species.
Nucleic Acids Res.
Pablo A. Moreno, Silvie Fexova, Nancy George, Jonathan R. Manning, Zhichao Miao, Suhaib Mohammed, Alfonso Muñoz-Pomer Fuentes, Anja Füllgrabe, Yalan Bi, Natassja Bush, Haider Iqbal, Upendra Kumbham, Andrey Solovyev, Lingyun Zhao, Ananth Prakash, David García-Seisdedos, Deepti Jaiswal Kundu, Shengbo Wang, Mathias Walzer, Laura Clarke, David Osumi-Sutherland, Marcela Karey Tello-Ruiz, Sunita Kumari, Doreen Ware, Jana Eliasova, Mark J. Arends, Martijn C. Nawijn, Kerstin B. Meyer, Tony Burdett, John C. Marioni, Sarah A. Teichmann, Juan Antonio Vizcaíno, Alvis Brazma, Irene Papatheodorou
2022 — conf
Modelling Technical and Biological Effects in scRNA-seq data with Scalable GPLVMs.
MLCB
Vidhi Lalchand, Aditya Ravuri, Emma Dann, Natsuhiko Kumasaka, Dinithi Sumanaweera, Rik G. H. Lindeboom, Shaista Madad, Sarah A. Teichmann, Neil D. Lawrence
2022 J jnl
Modelling Technical and Biological Effects in scRNA-seq data with Scalable GPLVMs.
CoRR
Vidhi Lalchand, Aditya Ravuri, Emma Dann, Natsuhiko Kumasaka, Dinithi Sumanaweera, Rik G. H. Lindeboom, Shaista Madad, Sarah A. Teichmann, Neil D. Lawrence
2020 J jnl
BBKNN: fast batch alignment of single cell transcriptomes.
Bioinform.
Krzysztof Polanski, Matthew D. Young, Zhichao Miao, Kerstin B. Meyer, Sarah A. Teichmann, Jong-Eun Park
2020 J jnl
Expression Atlas update: from tissues to single cells.
Nucleic Acids Res.
Irene Papatheodorou, Pablo A. Moreno, Jonathan R. Manning, Alfonso Muñoz-Pomer Fuentes, Nancy George, Silvie Fexova, Nuno A. Fonseca, Anja Füllgrabe, Matthew Green, Ni Huang, Laura Huerta, Haider Iqbal, Monica Jianu, Suhaib Mohammed, Lingyun Zhao, Andrew F. Jarnuczak, Simon Jupp, John C. Marioni, Kerstin B. Meyer, Robert Petryszak, Cesar Augusto Prada Medina, Carlos Talavera-López, Sarah A. Teichmann, Juan Antonio Vizcaíno, Alvis Brazma
2019 J jnl
Decoding human fetal liver haematopoiesis.
Nat.
Dorin-Mirel Popescu, Rachel A. Botting, Emily Stephenson, Kile Green, Simone Webb, Laura Jardine, Emily F. Calderbank, Krzysztof Polanski, Issac Goh, Mirjana Efremova, Meghan Acres, Daniel Maunder, Peter Vegh, Yorick Gitton, Jong-Eun Park, Roser Vento-Tormo, Zhichao Miao, David Dixon, Rachel Rowell, David McDonald, James Fletcher, Elizabeth Poyner, Gary Reynolds, Michael Mather, Corina Moldovan, Lira Mamanova, Frankie Greig, Matthew D. Young, Kerstin B. Meyer, Steven Lisgo, Jaume Bacardit, Andrew Fuller, Ben Millar, Barbara Innes, Susan Lindsay, Michael J. T. Stubbington, Monika S. Kowalczyk, Bo Li, Orr Ashenberg, Marcin Tabaka, Danielle Dionne, Timothy L. Tickle, Michal Slyper, Orit Rozenblatt-Rosen, Andrew Filby, Peter Carey, Alexandra-Chloé Villani, Anindita Roy, Aviv Regev, Alain Chédotal, Irene Roberts, Berthold Göttgens, Sam Behjati, Elisa Laurenti, Sarah A. Teichmann, Muzlifah Haniffa
2019 J jnl
The human body at cellular resolution: the NIH Human Biomolecular Atlas Program.
Nat.
Michael P. Snyder, Shin Lin, Amanda Posgai, Mark Atkinson, Aviv Regev, Jennifer Rood, Orit Rozenblatt-Rosen, Leslie Gaffney, Anna Hupalowska, Rahul Satija, Nils Gehlenborg, Jay Shendure, Julia Laskin, Pehr Harbury, Nicholas A. Nystrom, Jonathan C. Silverstein, Ziv Bar-Joseph, Kun Zhang, Katy Börner, Yiing Lin, Richard Conroy, Dena Procaccini, Ananda L. Roy, Ajay Pillai, Marishka Brown, Zorina S. Galis, Long Cai, Cole Trapnell, Dana Jackson, Garry P. Nolan, William James Greenleaf, Sylvia K. Plevritis, Sara Ahadi, Stephanie A. Nevins, Hayan Lee, Christian Martijn Schuerch, Sarah Black, Vishal Gautham Venkataraaman, Ed Esplin, Aaron Horning, Amir Bahmani, Xin Sun, Sanjay Jain, James S. Hagood, Gloria Pryhuber, Peter V. Kharchenko, Bernd Bodenmiller, Todd Brusko, Michael Clare-Salzler, Harry Nick, Kevin Otto, Clive Wasserfall, Marda Jorgensen, Maigan Brusko, Sergio Maffioletti, Richard M. Caprioli, Jeffrey M. Spraggins, Danielle Gutierrez, Nathan Heath Patterson, Elizabeth K. Neumann, Raymond Harris, Mark P. de Caestecker, Agnes B. Fogo, Raf Van de Plas, Ken Lau, Guo-Cheng Yuan, Qian Zhu, Ruben Dries, Peng Yin, Sinem K. Saka, Jocelyn Y. Kishi, Yu Wang, Isabel Goldaracena, Dong Hye Ye, Kristin E. Burnum-Johnson, Paul D. Piehowski, Charles Ansong, Ying Zhu, Tushar Desai, Jay Mulye, Peter Chou, Monica Nagendran, Sarah A. Teichmann, Benedict Paten, Robert F. Murphy, Jian Ma, Vladimir Yu. Kiselev, Carl Kingsford, Allyson Ricarte, Maria Keays, Sushma Anand Akoju, Matthew Ruffalo, Margaret Vella, Chuck McCallum, Leonard E. Cross, Samuel H. Friedman, Randy W. Heiland, Bruce William Herr II, Paul Macklin, Ellen M. Quardokus, Lisel Record, James P. Sluka, Griffin M. Weber, Philip D. Blood, Alexander Ropelewski, William Shirey, Robin M. Scibek, Paula M. Mabee, W. Christopher Lenhardt, Kimberly Robasky, Stavros Michailidis, John C. Marioni, Andrew Butler, Tim Stuart, Eyal Fisher, Shila Ghazanfar, Gökcen Eraslan, Tommaso Biancalani, Eeshit D. Vaishnav, Pothur Srinivas, Aaron Pawlyk, Salvatore Sechi, Elizabeth L. Wilder, James Anderson
2016 J jnl
Single-cell RNA-seq identifies a PD-1
Nat.
Yong Yu, Jason C. H. Tsang, Cui Wang, Simon Clare, Juexuan Wang, Xi Chen, Cordelia Brandt, Leanne Kane, Lia S. Campos, Liming Lu, Gabrielle T. Belz, Andrew N. J. McKenzie, Sarah A. Teichmann, Gordon Dougan, Pentao Liu
2012 — ed.
Information Processign in Cells and Tissues - 9th International Conference, IPCAT 2012, Cambridge, UK, March 31 - April 2, 2012. Proceedings
IPCAT
Michael A. Lones, Stephen L. Smith, Sarah A. Teichmann, Felix Naef, James Alfred Walker, Martin Trefzer
2010 J jnl
Assessing Computational Methods of Cis-Regulatory Module Prediction.
PLoS Comput. Biol.
Jing Su, Sarah A. Teichmann, Thomas A. Down
2010 J jnl
FlyTF: improved annotation and enhanced functionality of the
Nucleic Acids Res.
Ulrike Pfreundt, Daniel P. James, Susan Tweedie, Derek Wilson, Sarah A. Teichmann, Boris Adryan
2009 J jnl
BloodExpress: a database of gene expression in mouse haematopoiesis.
Nucleic Acids Res.
Diego Miranda-Saavedra, Subhajyoti De, Matthew W. B. Trotter, Sarah A. Teichmann, Berthold Göttgens
2009 J jnl
Protein domain organisation: adding order.
BMC Bioinform.
Sarah K. Kummerfeld, Sarah A. Teichmann
2008 J jnl
DBD--taxonomically broad transcription factor predictions: new content and functionality.
Nucleic Acids Res.
Derek Wilson, Varodom Charoensawan, Sarah K. Kummerfeld, Sarah A. Teichmann
2007 J jnl
The (In)dependence of Alternative Splicing and Gene Duplication.
PLoS Comput. Biol.
David Talavera, Christine Vogel, Modesto Orozco, Sarah A. Teichmann, Xavier de la Cruz
2006 J jnl
3D Complex: A Structural Classification of Protein Complexes.
PLoS Comput. Biol.
Emmanuel D. Levy, José B. Pereira-Leal, Cyrus Chothia, Sarah A. Teichmann
2006 J jnl
DBD: a transcription factor prediction database.
Nucleic Acids Res.
Sarah K. Kummerfeld, Sarah A. Teichmann
2006 J jnl
FlyTF: a systematic review of site-specific transcription factors in the fruit fly
Bioinform.
Boris Adryan, Sarah A. Teichmann
2005 J jnl
Statistical analysis of domains in interacting protein pairs.
Bioinform.
Tom M. W. Nye, Carlo Berzuini, Walter R. Gilks, M. Madan Babu, Sarah A. Teichmann
2005 J jnl
The properties of protein family space depend on experimental design.
Bioinform.
Victor Kunin, Sarah A. Teichmann, Martijn A. Huynen, Christos A. Ouzounis
2002 C conf
Principles of protein-protein interactions.
ECCB
Sarah A. Teichmann
2001 — conf
An insight into domain combinations.
ISMB (Supplement of Bioinformatics)
Gordana Apic, Julian Gough, Sarah A. Teichmann
2000 J jnl
Fast assignment of protein structures to sequences using the Intermediate Sequence Library PDB-ISL.
Bioinform.
Sarah A. Teichmann, Cyrus Chothia, George M. Church, Jong-Chan Park
2000 B conf
PDB_ISL: an intermediate sequence library for protein structure assignment.
RECOMB
Sarah A. Teichmann, Cyrus Chothia, George M. Church, Jong-Chan Park
1999 B conf
Genome sequences and protein structures.
RECOMB
Sarah A. Teichmann, Jong-Chan Park, Cyrus Chothia
1998 J jnl
DIVCLUS: an automatic method in the GEANFAMMER package that finds homologous domains in single- and multi-domain proteins.
Bioinform.
Jong-Chan Park, Sarah A. Teichmann