Sarah A. Pendergrass

33 papers Misc 14Journal 15Unranked 4
YearRankTypeTitle / Venue / Authors
2021 J jnl
Medical records-based chronic kidney disease phenotype for clinical care and "big data" observational and genetic studies.
npj Digit. Medicine
Ning Shang, Atlas Khan, Fernanda Polubriaginof, Francesca Zanoni, Karla Mehl, David Fasel, Paul E. Drawz, Robert J. Carroll, Joshua C. Denny, Matthew A. Hathcock, Adelaide M. Arruda-Olson, Peggy L. Peissig, Richard A. Dart, Murray H. Brilliant, Eric B. Larson, David S. Carrell, Sarah A. Pendergrass, Shefali Setia Verma, Marylyn D. Ritchie, Barbara Benoit, Vivian S. Gainer, Elizabeth W. Karlson, Adam S. Gordon, Gail P. Jarvik, Ian B. Stanaway, David R. Crosslin, Sumit Mohan, Iuliana Ionita-Laza, Nicholas P. Tatonetti, Ali G. Gharavi, George Hripcsak, Chunhua Weng, Krzysztof Kiryluk
2019 Misc conf
Detecting potential pleiotropy across cardiovascular and neurological diseases using univariate, bivariate, and multivariate methods on 43, 870 individuals from the eMERGE network.
PSB
Xinyuan Zhang, Yogasudha Veturi, Shefali Setia Verma, William Bone, Anurag Verma, Anastasia Lucas, Scott J. Hebbring, Joshua C. Denny, Ian B. Stanaway, Gail P. Jarvik, David R. Crosslin, Eric B. Larson, Laura Rasmussen-Torvik, Sarah A. Pendergrass, Jordan W. Smoller, Hakon Hakonarson, Patrick Sleiman, Chunhua Weng, David Fasel, Wei-Qi Wei, Iftikhar J. Kullo, Daniel J. Schaid, Wendy K. Chung, Marylyn D. Ritchie
2019 Misc conf
Interpretation of machine learning predictions for patient outcomes in electronic health records.
AMIA
William G. La Cava, Christopher R. Bauer, Jason H. Moore, Sarah A. Pendergrass
2019 J jnl
Interpretation of machine learning predictions for patient outcomes in electronic health records.
CoRR
William G. La Cava, Christopher R. Bauer, Jason H. Moore, Sarah A. Pendergrass
2019 J jnl
Real world scenarios in rare variant association analysis: the impact of imbalance and sample size on the power in silico.
BMC Bioinform.
Xinyuan Zhang, Anna Okula Basile, Sarah A. Pendergrass, Marylyn D. Ritchie
2018 J jnl
A simulation study investigating power estimates in phenome-wide association studies.
BMC Bioinform.
Anurag Verma, Yukiko Bradford, Scott M. Dudek, Anastasia Lucas, Shefali S. Verma, Sarah A. Pendergrass, Marylyn D. Ritchie
2017 Misc conf
Identifying Genetic Associations with Variability in Metabolic Health and Blood Count Laboratory Values: Diving into the Quantitative Traits by Leveraging Longitudinal Data from an EHR.
PSB
Shefali S. Verma, Anastasia Lucas, Daniel R. Lavage, Joseph B. Leader, Raghu Metpally, Sarathbabu Krishnamurthy, Frederick E. Dewey, Ingrid B. Borecki, Alexander E. Lopez, John D. Overton, John Penn, Jeffrey G. Reid, Sarah A. Pendergrass, Gerda Breitwieser, Marylyn D. Ritchie
2017 Misc conf
Opening the Door to the Large Scale Use of Clinical Lab Measures for Association Testing: Exploring Different Methods for Defining Phenotypes.
PSB
Christopher R. Bauer, Daniel R. Lavage, John Snyder, Joseph B. Leader, J. Matthew Mahoney, Sarah A. Pendergrass
2017 Misc conf
Session Introduction.
PSB
Anna Okula Basile, Anurag Verma, Marta Byrska-Bishop, Sarah A. Pendergrass, Christian Darabos, H. Lester Kirchner
2016 Misc conf
Integrating Clinical Laboratory Measures and ICD-9 Code Diagnoses in Phenome-Wide Association Studies.
PSB
Anurag Verma, Joseph B. Leader, Shefali S. Verma, Alex T. Frase, John R. Wallace, Scott M. Dudek, Daniel R. Lavage, Cristopher V. Van Hout, Frederick E. Dewey, John Penn, Alexander E. Lopez, John D. Overton, David J. Carey, David H. Ledbetter, H. Lester Kirchner, Marylyn D. Ritchie, Sarah A. Pendergrass
2016 J jnl
Pathway analysis by randomization incorporating structure - PARIS: an update.
Bioinform.
Mariusz Butkiewicz, Jessica Cooke Bailey, Alex T. Frase, Scott M. Dudek, Brian L. Yaspan, Marylyn D. Ritchie, Sarah A. Pendergrass, Jonathan L. Haines
2016 Misc conf
Phenome-Wide Interaction Study (PheWIS) in Aids Clinical Trials Group Data (ACTG).
PSB
Shefali S. Verma, Alex T. Frase, Anurag Verma, Sarah A. Pendergrass, Shaun Mahony, David W. Haas, Marylyn D. Ritchie
2016 J jnl
The detection and characterization of pleiotropy: discovery, progress, and promise.
Briefings Bioinform.
Anna L. Tyler, Dana C. Crawford, Sarah A. Pendergrass
2015 Misc conf
Contrasting Association Results Between Existing PheWAS Phenotype Definition Methods and Five Validated Electronic Phenotypes.
AMIA
Joseph B. Leader, Sarah A. Pendergrass, Anurag Verma, David J. Carey, Dustin N. Hartzel, Marylyn D. Ritchie, H. Lester Kirchner
2015 Misc conf
Session Introduction.
Pacific Symposium on Biocomputing
Molly A. Hall, Shefali S. Verma, Dennis P. Wall, Jason H. Moore, Brendan Keating, Daniel B. Campbell, Gregory Gibson, Folkert W. Asselbergs, Sarah A. Pendergrass
2015 J jnl
Towards a phenome-wide catalog of human clinical traits impacted by genetic ancestry.
BioData Min.
Logan Dumitrescu, Nicole A. Restrepo, Robert J. Goodloe, Jonathan Boston, Eric Farber-Eger, Sarah A. Pendergrass, William S. Bush, Dana C. Crawford
2014 J jnl
ATHENA: the analysis tool for heritable and environmental network associations.
Bioinform.
Emily Rose Holzinger, Scott M. Dudek, Alex T. Frase, Sarah A. Pendergrass, Marylyn D. Ritchie
2014 J jnl
Diverse convergent evidence in the genetic analysis of complex disease: coordinating omic, informatic, and experimental evidence to better identify and validate risk factors.
BioData Min.
Timothy H. Ciesielski, Sarah A. Pendergrass, Marquitta J. White, Nuri Kodaman, Rafal S. Sobota, Minjun Huang, Jacquelaine Bartlett, Jing Li, Qinxin Pan, Jiang Gui, Scott B. Selleck, Christopher I. Amos, Marylyn D. Ritchie, Jason H. Moore, Scott M. Williams
2014 J jnl
Investigating the relationship between mitochondrial genetic variation and cardiovascular-related traits to develop a framework for mitochondrial phenome-wide association studies.
BioData Min.
Sabrina L. Mitchell, Jacob B. Hall, Robert J. Goodloe, Jonathan Boston, Eric Farber-Eger, Sarah A. Pendergrass, William S. Bush, Dana C. Crawford
2014 J jnl
Knowledge-driven genomic interactions: an application in ovarian cancer.
BioData Min.
Do Kyoon Kim, Ruowang Li, Scott M. Dudek, Alex T. Frase, Sarah A. Pendergrass, Marylyn D. Ritchie
2014 Misc conf
Session introduction.
Pacific Symposium on Biocomputing
Anna L. Tyler, Dana C. Crawford, Sarah A. Pendergrass
2014 Misc conf
Uncovering the Etiology of Autism Spectrum Disorders: Genomics, Bioinformatics, Environment, Data Collection and Exploration, and Future Possibilities.
Pacific Symposium on Biocomputing
Sarah A. Pendergrass, Santhosh Girirajan, Scott B. Selleck
2013 J jnl
Genomic analyses with biofilter 2.0: knowledge driven filtering, annotation, and model development.
BioData Min.
Sarah A. Pendergrass, Alex T. Frase, John R. Wallace, Daniel Wolfe, Neerja Katiyar, Carrie Moore, Marylyn D. Ritchie
2013 Misc conf
Next-Generation Analysis of Cataracts: Determining Knowledge Driven Gene-Gene Interactions Using Biofilter, and Gene-Environment Interactions Using the PhenX Toolkit.
Pacific Symposium on Biocomputing
Sarah A. Pendergrass, Shefali S. Verma, Emily Rose Holzinger, Carrie Moore, John R. Wallace, Scott M. Dudek, Wayne Huggins, Terrie E. Kitchner, Carol Waudby, Richard L. Berg, Catherine A. McCarty, Marylyn D. Ritchie
2013 Misc conf
Using BioBin to Explore Rare Variant Population Stratification.
Pacific Symposium on Biocomputing
Carrie Moore, John R. Wallace, Alex T. Frase, Sarah A. Pendergrass, Marylyn D. Ritchie
2013 J jnl
Visualizing genomic information across chromosomes with PhenoGram.
BioData Min.
Daniel Wolfe, Scott M. Dudek, Marylyn D. Ritchie, Sarah A. Pendergrass
2012 — conf
A Biologically Informed Method for Detecting Associations with Rare Variants.
EvoBIO
Carrie C. Buchanan, John R. Wallace, Alex T. Frase, Eric Torstenson, Sarah A. Pendergrass, Marylyn D. Ritchie
2012 J jnl
Visually integrating and exploring high throughput Phenome-Wide Association Study (PheWAS) results using PheWAS-View.
BioData Min.
Sarah A. Pendergrass, Scott M. Dudek, Dana C. Crawford, Marylyn D. Ritchie
2011 — conf
Learning Phenotype Mapping for Integrating Large Genetic Data.
BioNLP@ACL
Chun-Nan Hsu, Cheng-Ju Kuo, Congxing Cai, Sarah A. Pendergrass, Marylyn D. Ritchie, José Luis Ambite
2011 Misc conf
Visual Integration of Results from a Large Dna Biobank (Biovu) Using Synthesis-View.
Pacific Symposium on Biocomputing
Sarah A. Pendergrass, Scott M. Dudek, Dan M. Roden, Dana C. Crawford, Marylyn D. Ritchie
2010 J jnl
Synthesis-View: visualization and interpretation of SNP association results for multi-cohort, multi-phenotype data and meta-analysis.
BioData Min.
Sarah A. Pendergrass, Scott M. Dudek, Dana C. Crawford, Marylyn D. Ritchie
2004 — conf
Microwave Breast Imaging with an Under-Determined Reconstruction Parameter Mesh.
ISBI
Paul M. Meaney, Qianqian Fang, Margaret Fanning, Sarah A. Pendergrass, Timothy Raynolds, Colleen Fox, Keith D. Paulsen
2002 — conf
Spectrum analysis of microwave breast examination data and reconstructed images.
ISBI
Dun Li, Paul M. Meaney, Margaret Fanning, Qianqian Fang, Sarah A. Pendergrass, Timothy Raynolds