Santiago Garcia-Vallvé

13 papers Journal 13
YearRankTypeTitle / Venue / Authors
2025 J jnl
SARS-CoV-2 main protease (M-pro) mutational profiling: An insight into mutation coldspots.
Comput. Biol. Medicine
Pol Garcia-Segura, Ariadna Llop-Peiró, Nil Novau-Ferré, Júlia Mestres-Truyol, Bryan Saldivar-Espinoza, Gerard Pujadas, Santiago Garcia-Vallvé
2024 J jnl
Challenges in distinguishing functional proteins from polyproteins in databases: implications for drug discovery.
Briefings Bioinform.
Ariadna Llop-Peiró, Gerard Pujadas, Santiago Garcia-Vallvé
2024 J jnl
Correction: DecoyFinder, a tool for finding decoy molecules.
J. Cheminformatics
Adrià Cereto-Massagué, Santiago Garcia-Vallvé, Gerard Pujadas
2013 J jnl
The good, the bad and the dubious: VHELIBS, a validation helper for ligands and binding sites.
J. Cheminformatics
Adrià Cereto-Massagué, María José Ojeda, Robbie P. Joosten, Cristina Valls, Miquel Mulero, M. Josepa Salvado, Anna Arola-Arnal, Lluís Arola, Santiago Garcia-Vallvé, Gerard Pujadas
2012 J jnl
DecoyFinder, a tool for finding decoy molecules.
J. Cheminformatics
Adrià Cereto-Massagué, Santiago Garcia-Vallvé, Gerard Pujadas
2012 J jnl
DecoyFinder: an easy-to-use python GUI application for building target-specific decoy sets.
Bioinform.
Adrià Cereto-Massagué, Laura Guasch, Cristina Valls, Miquel Mulero, Gerard Pujadas, Santiago Garcia-Vallvé
2011 J jnl
Structural insights for the design of new PPARgamma partial agonists with high binding affinity and low transactivation activity.
J. Comput. Aided Mol. Des.
Laura Guasch, Esther Sala, Cristina Valls, Mayte Blay, Miquel Mulero, Lluís Arola, Gerard Pujadas, Santiago Garcia-Vallvé
2008 J jnl
E-CAI: a novel server to estimate an expected value of Codon Adaptation Index (eCAI).
BMC Bioinform.
Pere Puigbò, Ignacio G. Bravo, Santiago Garcia-Vallvé
2008 J jnl
HEG-DB: a database of predicted highly expressed genes in prokaryotic complete genomes under translational selection.
Nucleic Acids Res.
Pere Puigbò, Antoni Romeu, Santiago Garcia-Vallvé
2007 J jnl
OPTIMIZER: a web server for optimizing the codon usage of DNA sequences.
Nucleic Acids Res.
Pere Puigbò, Eduard Guzmán, Antoni Romeu, Santiago Garcia-Vallvé
2007 J jnl
TOPD/FMTS: a new software to compare phylogenetic trees.
Bioinform.
Pere Puigbò, Santiago Garcia-Vallvé, James O. McInerney
2006 J jnl
Use of a multi-way method to analyze the amino acid composition of a conserved group of orthologous proteins in prokaryotes.
BMC Bioinform.
Alberto Pasamontes, Santiago Garcia-Vallvé
2003 J jnl
HGT-DB: a database of putative horizontally transferred genes in prokaryotic complete genomes.
Nucleic Acids Res.
Santiago Garcia-Vallvé, Eduard Guzmán, M. A. Montero, Antoni Romeu