Sangseon Lee

25 papers A* 4Journal 17Unranked 4
YearRankTypeTitle / Venue / Authors
2025 A* conf
BounDr.E: Predicting Drug-likeness via Biomedical Knowledge Alignment and EM-like One-Class Boundary Optimization.
ICML
Dongmin Bang, Inyoung Sung, Yinhua Piao, Sangseon Lee, Sun Kim
2025 A* conf
CheapNet: Cross-attention on Hierarchical representations for Efficient protein-ligand binding Affinity Prediction.
ICLR
Hyukjun Lim, Sun Kim, Sangseon Lee
2025 J jnl
Dual Representation Learning for Predicting Drug-Side Effect Frequency Using Protein Target Information.
IEEE J. Biomed. Health Informatics
Sungjoon Park, Sangseon Lee, Minwoo Pak, Sun Kim
2025 J jnl
SubDyve: Subgraph-Driven Dynamic Propagation for Virtual Screening Enhancement Controlling False Positive.
CoRR
Jungseob Yi, Seoyoung Choi, Sun Kim, Sangseon Lee
2025 J jnl
Transcriptome Transformer: improving patient survival prediction via multitask learning of transcriptomic and clinical features.
Briefings Bioinform.
Bonil Koo, Inyoung Sung, Sangseon Lee, Sun Kim
2024 A* conf
Improving Out-of-Distribution Generalization in Graphs via Hierarchical Semantic Environments.
CVPR
Yinhua Piao, Sangseon Lee, Yijingxiu Lu, Sun Kim
2024 J jnl
Improving out-of-distribution generalization in graphs via hierarchical semantic environments.
CoRR
Yinhua Piao, Sangseon Lee, Yijingxiu Lu, Sun Kim
2023 J jnl
A model-agnostic framework to enhance knowledge graph-based drug combination prediction with drug-drug interaction data and supervised contrastive learning.
Briefings Bioinform.
Jeonghyeon Gu, Dongmin Bang, Jungseob Yi, Sangseon Lee, Dong Kyu Kim, Sun Kim
2023 J jnl
Improved drug response prediction by drug target data integration via network-based profiling.
Briefings Bioinform.
Minwoo Pak, Sangseon Lee, Inyoung Sung, Bonil Koo, Sun Kim
2022 J jnl
AutoCoV: tracking the early spread of COVID-19 in terms of the spatial and temporal patterns from embedding space by K-mer based deep learning.
BMC Bioinform.
Inyoung Sung, Sangseon Lee, Minwoo Pak, Yunyol Shin, Sun Kim
2022 — conf
Embedding of FDA Approved Drugs in Chemical Space Using Cascade Autoencoder with Metric Learning.
BigComp
Jungwoo Kim, Sangsoo Lim, Sangseon Lee, Changyun Cho, Sun Kim
2022 J jnl
MLDEG: A Machine Learning Approach to Identify Differentially Expressed Genes Using Network Property and Network Propagation.
IEEE ACM Trans. Comput. Biol. Bioinform.
Ji Hwan Moon, Sangseon Lee, Minwoo Pak, Benjamin Hur, Sun Kim
2022 J jnl
SPGP: Structure Prototype Guided Graph Pooling.
CoRR
Sangseon Lee, Dohoon Lee, Yinhua Piao, Sun Kim
2022 A* conf
Sparse Structure Learning via Graph Neural Networks for Inductive Document Classification.
AAAI
Yinhua Piao, Sangseon Lee, Dohoon Lee, Sun Kim
2021 — conf
A probabilistic model for pathway-guided gene set selection.
BIBM
Inyoung Kim, Sangseon Lee, Youngkuk Kim, Hugh Namkoong, Sun Kim
2021 J jnl
Ranked k-Spectrum Kernel for Comparative and Evolutionary Comparison of Exons, Introns, and CpG Islands.
IEEE ACM Trans. Comput. Biol. Bioinform.
Sangseon Lee, Taeheon Lee, Yung-Kyun Noh, Sun Kim
2021 J jnl
Sparse Structure Learning via Graph Neural Networks for Inductive Document Classification.
CoRR
Yinhua Piao, Sangseon Lee, Dohoon Lee, Sun Kim
2020 J jnl
Cancer subtype classification and modeling by pathway attention and propagation.
Bioinform.
Sangseon Lee, Sangsoo Lim, Taeheon Lee, Inyoung Sung, Sun Kim
2020 J jnl
Comprehensive and critical evaluation of individualized pathway activity measurement tools on pan-cancer data.
Briefings Bioinform.
Sangsoo Lim, Sangseon Lee, Inuk Jung, SungMin Rhee, Sun Kim
2019 J jnl
PRISM: methylation pattern-based, reference-free inference of subclonal makeup.
Bioinform.
Do-Hoon Lee, Sangseon Lee, Sun Kim
2019 J jnl
Venn-diaNet : venn diagram based network propagation analysis framework for comparing multiple biological experiments.
BMC Bioinform.
Benjamin Hur, Dongwon Kang, Sangseon Lee, Ji Hwan Moon, Gung Lee, Sun Kim
2018 — conf
Identifying stress-related genes and predicting stress types in Arabidopsis using logical correlation layer and CMCL loss through time-series data.
BIBM
Dongwon Kang, Hongryul Ahn, Sangseon Lee, Chai-Jin Lee, Jihye Hur, Woosuk Jung, Sun Kim
2017 — conf
Flow maximization analysis of cell cycle pathway activation status in breast cancer subtypes.
BigComp
Sangseon Lee, Ji Hwan Moon, Youngjune Park, Sun Kim
2017 J jnl
PINTnet: construction of condition-specific pathway interaction network by computing shortest paths on weighted PPI.
BMC Syst. Biol.
Ji Hwan Moon, Sangsoo Lim, Kyuri Jo, Sangseon Lee, Seokjun Seo, Sun Kim
2016 J jnl
Subtype-specific CpG island shore methylation and mutation patterns in 30 breast cancer cell lines.
BMC Syst. Biol.
Heejoon Chae, Sangseon Lee, Kenneth P. Nephew, Sun Kim