Sandra Gesing

126 papers B 7C 4Misc 1Journal 54Unranked 50
YearRankTypeTitle / Venue / Authors
2026 — conf
Introduction to the Minitrack on Impact of AI on Software Engineering.
HICSS
Stefan H. A. Wittek, Sandra Gesing, Peter Salhofer, Ryan Karl
2025 — conf
Introduction to the Minitrack on Impact of AI on Software Engineering.
HICSS
Stefan H. A. Wittek, Sandra Gesing, Peter Salhofer
2025 — conf
RSEs 2035: Surviving or Thriving in the Age of AI.
eScience
Sandra Gesing
2025 J jnl
Report of the 2025 Workshop on Next-Generation Ecosystems for Scientific Computing: Harnessing Community, Software, and AI for Cross-Disciplinary Team Science.
CoRR
Lois Curfman McInnes, Dorian Arnold, Prasanna Balaprakash, Mike Bernhardt, Beth Cerny, Anshu Dubey, Roscoe Giles, Denice Ward Hood, Mary Ann E. Leung, Vanessa Lopez-Marrero, Paul Messina, Olivia B. Newton, Chris Oehmen, Stefan M. Wild, James M. Willenbring, Lou Woodley, Tony Baylis, David E. Bernholdt, Chris Camano, Johanna Cohoon, Charles Ferenbaugh, Stephen M. Fiore, Sandra Gesing, Diego Gómez-Zará, James Howison, Tanzima Z. Islam, David Kepczynski, Charles Lively, Harshitha Menon, Bronson Messer, Marieme Ngom, Umesh Paliath, Michael E. Papka, Irene Qualters, Elaine M. Raybourn, Katherine Riley, Paulina Rodriguez, Damian W. I. Rouson, Michelle Schwalbe, Sudip K. Seal, Ozge Surer, Valerie Taylor, Lingfei Wu
2025 J jnl
Ten simple rules for good model-sharing practices.
PLoS Comput. Biol.
Ismael Kherroubi Garcia, Christopher Erdmann, Sandra Gesing, C. Michael Barton, Lauren Cadwallader, Geerten M. Hengeveld, Christine R. Kirkpatrick, Kathryn Knight, Carsten Lemmen, Rebecca Ringuette, Qing Zhan, Melissa Harrison, Feilim Mac Gabhann, Natalie Meyers, Cailean Osborne, Charlotte Till, Paul R. Brenner, Matt Buys, Min Chen, Allen Lee, Jason A. Papin, Yuhan Rao
2024 — conf
AI and Science Gateways: A Promising Combination for Accelerating Science and Research Computing.
PEARC
Jeanette M. Sperhac, Sandra Gesing, Michael G. Zentner, Claire Stirm, Rob Quick, Joe Stubbs
2024 — conf
Introduction to the Minitrack on Smart Application Development and Data Streaming: IoT, I4.0, Smart Cities and More.
HICSS
Sandra Gesing, Peter Salhofer, Cezary Mazurek, Charlie Catlett
2024 — conf
Introduction to the Minitrack on Software Sustainability: Research on Usability, Maintainability, and Reproducibility Minitrack.
HICSS
Maytal Dahan, Joe Stubbs, Sandra Gesing
2024 J jnl
Unleashing quantum algorithms with Qinterpreter: bridging the gap between theory and practice across leading quantum computing platforms.
PeerJ Comput. Sci.
Wilmer Contreras Sepúlveda, Braulio Misael Villegas-Martínez, Sandra Gesing, José Javier Sánchez-Mondragón, Juan Carlos Sánchez Pérez, Claudia Andrea Vidales-Basurto, J. Jesús Escobedo Alatorre, Ángel David Torres-Palencia, Omar Palillero-Sandoval, Jacob Licea-Rodriguez, Néstor Lozano-Crisóstomo, Julio César García-Melgarejo, Eddie Nelson Palacios-Pérez
2023 J jnl
Hubzero: Community Growth for Four Science Gateways Supporting Open Science.
Comput. Sci. Eng.
Sandra Gesing, Claire Stirm, Gerhard Klimeck, Lynn K. Zentner, Su Wang, Braulio Misael Villegas-Martínez, Hector M. Moya-Cessa, Carrie Diaz Eaton, Samuel S. Donovan, Carol X. Song, Lan Zhao, I Luk Kim, Alejandro Strachan, Michael G. Zentner, Rajesh Kalyanam
2023 — conf
Introduction to the Minitrack on Smart (City) and Data Streaming Application Development: Challenges and Experiences.
HICSS
Charlie Catlett, Peter Salhofer, Cezary Mazurek, Sandra Gesing
2023 — conf
Introduction to the Minitrack on Software Sustainability: Strategies for Long-Lasting and Usable Software.
HICSS
Sandra Gesing, Maytal Dahan, Joe Stubbs
2023 J jnl
Science Gateways and the Humanities: An Exploratory Study of Their Rare Partnership.
Comput. Sci. Eng.
Kerk F. Kee, Cassandra Hayes, Sandra Gesing, Annelie Rugg, Shannon Bradley, Steven R. Brandt, Natalie Meyers, Richard P. Johnson, Quinn Dombrowski
2023 J jnl
Toward a reference architecture based science gateway framework with embedded e-learning support.
Concurr. Comput. Pract. Exp.
Gabriele Pierantoni, Tamás Kiss, Alexander Bolotov, Dimitrios Kagialis, James Deslauriers, Amjad Ullah, Huankai Chen, David Chan You Fee, Hai-Van Dang, József Kovács, Anna Belehaki, Themistocles Herekakis, Ioanna Tsagouri, Sandra Gesing
2023 J jnl
Unleashing quantum algorithms with Qinterpreter: bridging the gap between theory and practice across leading quantum computing platforms.
CoRR
Wilmer Contreras Sepúlveda, Ángel David Torres-Palencia, José Javier Sánchez Mondragón, Braulio Misael Villegas-Martínez, J. Jesús Escobedo Alatorre, Sandra Gesing, Néstor Lozano-Crisóstomo, Julio César García-Melgarejo, Juan Carlos Sánchez Pérez, Eddie Nelson Palacios-Pérez, Omar Palillero-Sandoval
2023 J jnl
VisDict: Improving Communication Via a Visual Dictionary in a Science Gateway.
Comput. Sci. Eng.
Sandra Gesing, Ewa Deelman, Michael D. Hildreth, Ramandeep Makhija, Mary Ann McDowell, Natalie K. Meyers, Douglas Thain
2022 J jnl
A survey of the state of the practice for research software in the United States.
PeerJ Comput. Sci.
Jeffrey C. Carver, Nic Weber, Karthik Ram, Sandra Gesing, Daniel S. Katz
2022 — conf
Introduction to the Minitrack on Smart (City) and Data Streaming Application Development: Challenges and Experiences.
HICSS
Charlie Catlett, Sandra Gesing, Cezary Mazurek, Peter Salhofer
2022 — conf
Introduction to the Minitrack on Software Sustainability: Strategies for Long-Lasting and Usable Research Software.
HICSS
Maytal Dahan, Sandra Gesing, Joe Stubbs
2022 — conf
Open Science via HUBzero: Exploring Five Science Gateways Supporting and Growing their Open Science Communities.
HICSS
Sandra Gesing, Claire Stirm, Gerhard Klimeck, Lynn K. Zentner, Su Wang, Braulio Misael Villegas-Martínez, Carrie Diaz Eaton, Samuel S. Donovan, Lan Zhao, Carol X. Song, I Luk Kim, Alejandro Strachan, Michael G. Zentner, Rajesh Kalyanam
2022 J jnl
The Science Gateway Community Institute's Consulting Services Program: Lessons for Research Software Engineering Organizations.
CoRR
Marlon E. Pierce, Michael G. Zentner, Maytal Dahan, Sandra Gesing, Claire Stirm, Linda Bailey Hayden
2021 — conf
A Vision for Science Gateways: Bridging the Gap and Broadening the Outreach.
PEARC
Sandra Gesing, Steven R. Brandt, Shannon Bradley, Mark Potkewitz, Kerk F. Kee, Noreen Whysel, Mark J. Perri, Sean B. Cleveland, Annelie Rugg, Jack A. Smith
2021 — conf
Addressing Research Software Sustainability via Institutes.
BoKSS@ICSE
Daniel S. Katz, Jeffrey C. Carver, Neil P. Chue Hong, Sandra Gesing, Simon Hettrick, Tom Honeyman, Karthik Ram, Nicholas M. Weber
2021 J jnl
Addressing Research Software Sustainability via Institutes.
CoRR
Daniel S. Katz, Jeffrey C. Carver, Neil P. Chue Hong, Sandra Gesing, Simon Hettrick, Tom Honeyman, Karthik Ram, Nicholas M. Weber
2021 — conf
An Evaluation of Cyberinfrastructure Facilitators Skills Training in the Virtual Residency Program.
PEARC
Henry Neeman, Lorna Rivera, Lizanne DeStefano, Hussein M. Al-Azzawi, Dana Brunson, Patrick J. Clemins, Dirk Colbry, Calvin Frye, Sandra Gesing, Joshua Gyllinsky, Anna Klimaszewski-Patterson, Anchalee Phataralaoha, Todd Price, Mohammed Tanash, Daniel Voss
2021 — conf
Emerging Frameworks for Advancing Scientific Workflows Research, Development, and Education.
WORKS
Henri Casanova, Ewa Deelman, Sandra Gesing, Michael D. Hildreth, Stephen Hudson, William Koch, Jeffrey Larson, Mary Ann McDowell, Natalie Meyers, John-Luke Navarro, George Papadimitriou, Ryan Tanaka, Ian J. Taylor, Douglas Thain, Stefan M. Wild, Rosa Filgueira, Rafael Ferreira da Silva
2021 — conf
Introduction to the Minitrack on Smart (City) Application Development: Challenges and Experiences.
HICSS
Peter Salhofer, Cezary Mazurek, Sandra Gesing
2021 — conf
Introduction to the Minitrack on Software Survivability: Strategies for Long-Lasting and Usable Research Software.
HICSS
Maytal Dahan, Joe Stubbs, Sandra Gesing
2021 J jnl
Measuring success for a future vision: Defining impact in science gateways/virtual research environments.
Concurr. Comput. Pract. Exp.
Prasad Calyam, Nancy Wilkins-Diehr, Mark A. Miller, Emre H. Brookes, Ritu Arora, Amit Chourasia, Douglas M. Jennewein, Viswanath Nandigam, M. Drew LaMar, Sean B. Cleveland, Greg Newman, Shaowen Wang, Ilya Zaslavsky, Michael A. Cianfrocco, Kevin M. Ellett, David Tarboton, Keith G. Jeffery, Zhiming Zhao, Juan González-Aranda, Mark J. Perri, Gregory E. Tucker, Leonardo Candela, Tamás Kiss, Sandra Gesing
2021 — ed.
Proceedings of the 11th International Workshop on Science Gateways, Ljubljana, Slovenia, 12-14 June, 2019.
IWSG
Vlado Stankovski, Sandra Gesing
2021 J jnl
Reproducibility Practice in High-Performance Computing: Community Survey Results.
Comput. Sci. Eng.
Beth A. Plale, Tanu Malik, Line C. Pouchard, Lorena A. Barba, Sandra Gesing
2021 J jnl
Special issue on workflows in support of large-scale science.
Future Gener. Comput. Syst.
Rafael Ferreira da Silva, Sandra Gesing, Rizos Sakellariou, Ian J. Taylor
2021 — conf
Sustaining Research Software via Research Software Engineers and Professional Associations.
BoKSS@ICSE
Jeffrey C. Carver, Ian A. Cosden, Chris Hill, Sandra Gesing, Daniel S. Katz
2021 J jnl
Sustaining Research Software via Research Software Engineers and Professional Associations.
CoRR
Jeffrey C. Carver, Ian A. Cosden, Chris Hill, Sandra Gesing, Daniel S. Katz
2021 J jnl
Toward Long-Term and Archivable Reproducibility.
Comput. Sci. Eng.
Mohammad Akhlaghi, Raúl Infante-Sainz, Boudewijn F. Roukema, Mohammadreza Khellat, David Valls-Gabaud, Roberto Baena Gallé, Lorena A. Barba, Sandra Gesing
2021 J jnl
Workflows Community Summit: Advancing the State-of-the-art of Scientific Workflows Management Systems Research and Development.
CoRR
Rafael Ferreira da Silva, Henri Casanova, Kyle Chard, Tainã Coleman, Dan Laney, Dong H. Ahn, Shantenu Jha, Dorran Howell, Stian Soiland-Reyes, Ilkay Altintas, Douglas Thain, Rosa Filgueira, Yadu N. Babuji, Rosa M. Badia, Bartosz Balis, Silvina Caíno-Lores, Scott Callaghan, Frederik Coppens, Michael R. Crusoe, Kaushik De, Frank Di Natale, Tu Mai Anh Do, Bjoern Enders, Thomas Fahringer, Anne Fouilloux, Grigori Fursin, Alban Gaignard, Alex Ganose, Daniel Garijo, Sandra Gesing, Carole A. Goble, Adil Hasan, Sebastiaan Huber, Daniel S. Katz, Ulf Leser, Douglas Lowe, Bertram Ludäscher, Ketan Maheshwari, Maciej Malawski, Rajiv Mayani, Kshitij Mehta, André Merzky, Todd S. Munson, Jonathan Ozik, Loïc Pottier, Sashko Ristov, Mehdi Roozmeh, Renan Souza, Frédéric Suter, Benjamín Tovar, Matteo Turilli, Karan Vahi, Alvaro Vidal-Torreira, Wendy R. Whitcup, Michael Wilde, Alan R. Williams, Matthew Wolf, Justin M. Wozniak
2020 — conf
Cyberinfrastructure Facilitation Skills Training via the Virtual Residency Program.
PEARC
Henry Neeman, David Akin, Hussein M. Al-Azzawi, Kevin L. Brandt, Jamene Brooks Kieffer, Dana Brunson, Dirk Colbry, Sandra Gesing, Anna Klimaszewski-Patterson, Claire Mizumoto, Joy A. Pine-Thomas, Anita Z. Schwartz, Horst Severini, Mohammed Tanash, Daniel Voss
2020 J jnl
International Science Gateways 2017 Special issue.
Future Gener. Comput. Syst.
Maytal Dahan, Rebecca Pirzl, Sandra Gesing
2020 — conf
Introduction to the Minitrack on Smart (City) Application Development: Challenges and Experiences.
HICSS
Sandra Gesing, Peter Salhofer, Charlie Catlett
2020 — conf
SGCI Incubator and its Role in Workforce Development: Lessons Learned from Training, Consultancy, and Building a Community of Community-Builders for Science Gateways.
PEARC
Paul Parsons, Sandra Gesing, Claire Stirm, Michael G. Zentner
2020 J jnl
The ICTBioMed NCIP Hub: Cancer research in a science gateway consortium.
Future Gener. Comput. Syst.
Amit Saxena, Rajendra Joshi, Hemant Darbari, Cezary Mazurek, Amar Bhat, Anil Srivastava, Kevin Wojkovich, Ken Buetow, Sandra Gesing
2020 J jnl
The challenges of theory-software translation.
F1000Research
Caroline Jay, Robert Haines, Daniel S. Katz, Jeffrey C. Carver, Sandra Gesing, Steven R. Brandt, James Howison, Anshu Dubey, James C. Phillips, Hui Wan, Matthew J. Turk
2019 J jnl
Community Organizations: Changing the Culture in Which Research Software Is Developed and Sustained.
Comput. Sci. Eng.
Daniel S. Katz, Lois Curfman McInnes, David E. Bernholdt, Abigail Cabunoc Mayes, Neil P. Chue Hong, Jonah Duckles, Sandra Gesing, Michael A. Heroux, Simon Hettrick, Rafael C. Jiménez, Marlon E. Pierce, Belinda Weaver, Nancy Wilkins-Diehr
2019 — conf
Cultivating the Cyberinfrastructure Workforce via an Intermediate/Advanced Virtual Residency Workshop.
PEARC
Henry Neeman, Hussein M. Al-Azzawi, Dana Brunson, William Burke, Dirk Colbry, Jeff T. Falgout, James W. Ferguson, Sandra Gesing, Joshua Gyllinsky, Christopher S. Simmons, Jason L. Simms, Mohammed Tanash, Daniel Voss, Jason Wells, Scott Yockel
2019 — conf
HUBzero's Variations of Sustainability: From Simulation/Modeling Tools to Communities.
IWSG
Claire Stirm, Sandra Gesing, Michael G. Zentner, Gerhard Klimeck, Lynn K. Zentner, Carly C. Dearborn, HUBzero Team
2019 — conf
HUBzero© Goes OneSciencePlace: The Next Community-Driven Steps for Providing Software-as-a-Service.
eScience
David Benham, Sandra Gesing
2019 — conf
HUBzero®: Novel Concepts Applied to Established Computing Infrastructures to Address Communities' Needs.
PEARC
Sandra Gesing, Michael G. Zentner, Steve Clark, Claire Stirm, Ben Haley
2019 — conf
Introduction to the Minitrack on Smart (City) Application Development: Challenges and Experiences.
HICSS
Peter Salhofer, Sandra Gesing, Charlie Catlett
2019 — ed.
Proceedings of the 10th International Workshop on Science Gateways, Edinburgh, Scotland, UK, 13-15 June, 2018
IWSG
Malcolm P. Atkinson, Sandra Gesing
2019 — ed.
Proceedings of the 9th International Workshop on Science Gateways, Poznań, Poland, 19-21 June, 2017.
IWSG
Sandra Gesing, Krzysztof Kurowski, Tamás Kiss
2019 J jnl
REMEDI central - expanding and sustaining a medical device community.
Future Gener. Comput. Syst.
Claire Stirm, Rich Zink, Sandra Gesing, Michael G. Zentner, Damion Junk
2019 J jnl
Science gateways: Sustainability via on-campus teams.
Future Gener. Comput. Syst.
Sandra Gesing, Katherine A. Lawrence, Maytal Dahan, Marlon E. Pierce, Nancy Wilkins-Diehr, Michael G. Zentner
2019 J jnl
Sustaining Research Software: an SC18 Panel.
CoRR
Daniel S. Katz, Patrick Aerts, Neil P. Chue Hong, Anshu Dubey, Sandra Gesing, Henry Neeman, David E. Pearah
2019 J jnl
The Science Gateways Community Institute: Collaborations and efforts on international scale.
Future Gener. Comput. Syst.
Sandra Gesing, Maytal Dahan, Michael G. Zentner, Nancy Wilkins-Diehr, Katherine A. Lawrence
2019 J jnl
The global impact of science gateways, virtual research environments and virtual laboratories.
Future Gener. Comput. Syst.
Michelle Barker, Sílvia Delgado Olabarriaga, Nancy Wilkins-Diehr, Sandra Gesing, Daniel S. Katz, Shayan Shahand, Scott Henwood, Tristan Glatard, Keith G. Jeffery, Brian Corrie, Andrew E. Treloar, Helen M. Glaves, Lesley Wyborn, Neil P. Chue Hong, Alessandro Costa
2019 J jnl
Theory-Software Translation: Research Challenges and Future Directions.
CoRR
Caroline Jay, Robert Haines, Daniel S. Katz, Jeffrey C. Carver, James C. Phillips, Anshu Dubey, Sandra Gesing, Matthew Turk, Hui Wan, Hubertus Van Dam, James Howison, Vitali A. Morozov, Steven R. Brandt
2018 B ed.
18th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing, CCGRID 2018, Washington, DC, USA, May 1-4, 2018
CCGRID
Esam El-Araby, Dhabaleswar K. Panda, Sandra Gesing, Amy W. Apon, Volodymyr V. Kindratenko, Massimo Cafaro, Alfredo Cuzzocrea
2018 J jnl
Community Organizations: Changing the Culture in Which Research Software Is Developed and Sustained.
CoRR
Daniel S. Katz, Lois Curfman McInnes, David E. Bernholdt, Abigail Cabunoc Mayes, Neil P. Chue Hong, Jonah Duckles, Sandra Gesing, Michael A. Heroux, Simon Hettrick, Rafael C. Jiménez, Marlon E. Pierce, Belinda Weaver, Nancy Wilkins-Diehr
2018 J jnl
Conceptualization of a US Research Software Sustainability Institute (URSSI).
Comput. Sci. Eng.
Jeffrey C. Carver, Sandra Gesing, Daniel S. Katz, Karthik Ram, Nic Weber
2018 J jnl
Gathering requirements for advancing simulations in HPC infrastructures via science gateways.
Future Gener. Comput. Syst.
Sandra Gesing, Rion Dooley, Marlon E. Pierce, Jens Krüger, Richard Grunzke, Sonja Herres-Pawlis, Alexander Hoffmann
2018 — conf
Introduction to the Minitrack on Turning Smart: Challenges and Experiences in Smart Application Development.
HICSS
Peter Salhofer, Sandra Gesing, Charlie Catlett
2018 — conf
Progress Update on the Development and Implementation of the Advanced Cyberinfrastructure Research & Education Facilitators Virtual Residency Program.
PEARC
Henry Neeman, Hussein M. Al-Azzawi, Aaron Bergstrom, Zoe K. Braiterman, Dana Brunson, Dirk Colbry, Eduardo Colmenares, Akilah N. Fuller, Sandra Gesing, Maria Kalyvaki, Claire Mizumoto, Jeho Park, Anita Z. Schwartz, Jason L. Simms, Rustomji Vania
2018 — conf
REMEDI - Tactics of Expanding a Science Gateway Community.
IWSG
Claire Stirm, Rich Zink, Sandra Gesing
2018 — ch.
Science Gateways in HPC: Usability Meets Efficiency and Effectiveness.
Modeling and Simulation in HPC and Cloud Systems
Sandra Gesing
2018 — conf
Towards a Science Gateway Reference Architecture.
IWSG
Marlon E. Pierce, Mark A. Miller, Emre H. Brookes, Mona Wong, Yan Liu, Enis Afgan, Sandra Gesing, Maytal Dahan, Suresh Marru, Tony Walker
2017 J jnl
Boosting analyses in the life sciences via clusters, grids and clouds.
Future Gener. Comput. Syst.
Sandra Gesing, Jesús Carretero, Francisco Javier García Blas, Johan Montagnat
2017 — conf
Introduction to Science Gateways and Portals Minitrack.
HICSS
Sandra Gesing, Nancy Wilkins-Diehr, Michelle Barker
2017 — ed.
Proceedings of the 11th Workshop on Workflows in Support of Large-Scale Science co-located with The International Conference for High Performance Computing, Networking, Storage and Analysis (SC 2016), Salt Lake City, Utah, USA, November 14, 2016.
WORKS@SC
Sandra Gesing, Rizos Sakellariou
2017 — ed.
Proceedings of the 12th Workshop on Workflows in Support of Large-Scale Science, WORKS@SC 2017, Denver, CO, USA, November 12 - 17, 2017
WORKS@SC
Johan Montagnat, Ian J. Taylor, Sandra Gesing, Rizos Sakellariou
2017 — ed.
Proceedings of the 8th International Workshop on Science Gateways, IWSG 2016, Rome, Italy, June 8-10, 2016
IWSG
Sandra Gesing, Jens Krüger
2017 J jnl
Report on the Fourth Workshop on Sustainable Software for Science: Practice and Experiences (WSSSPE4).
CoRR
Daniel S. Katz, Kyle E. Niemeyer, Sandra Gesing, Lorraine J. Hwang, Wolfgang Bangerth, Simon Hettrick, Ray Idaszak, Jean Salac, Neil P. Chue Hong, Santiago Núñez-Corrales, Alice Allen, R. Stuart Geiger, Jonah Miller, Emily Chen, Anshu Dubey, Patricia Lago
2017 — conf
Science Gateways Incubator: Software Sustainability Meets Community Needs.
eScience
Sandra Gesing, Michael G. Zentner, Juliana Casavan, Betsy Hillery, Mihaela Vorvoreanu, Randy W. Heiland, Suresh Marru, Marlon E. Pierce, Nayiri Mullinix, Nancy Maron
2017 — conf
Science Gateways: The Long Road to the Birth of an Institute.
HICSS
Sandra Gesing, Nancy Wilkins-Diehr, Maytal Dahan, Katherine A. Lawrence, Michael G. Zentner, Marlon E. Pierce, Linda B. Hayden, Suresh Marru
2017 J jnl
Scientific workflows: Past, present and future.
Future Gener. Comput. Syst.
Malcolm P. Atkinson, Sandra Gesing, Johan Montagnat, Ian J. Taylor
2017 — conf
The Science Gateways Community Institute: Going Beyond Borders.
IWSG
Sandra Gesing, Maytal Dahan, Michael G. Zentner, Nancy Wilkins-Diehr, Katherine A. Lawrence
2016 — conf
A Model for Information and Action Flows Connecting Science Gateways to Distributed Computing Infrastructures.
IWSG
Gabriele Pierantoni, Dermot Frost, Sandra Gesing, Sílvia Delgado Olabarriaga, Mohammad Mahdi Jaghoori, Gábor Terstyánszky, Junaid Arshad
2016 J jnl
From the desktop to the grid: scalable bioinformatics via workflow conversion.
BMC Bioinform.
Luis de la Garza, Johannes Veit, András Szolek, Marc Röttig, Stephan Aiche, Sandra Gesing, Knut Reinert, Oliver Kohlbacher
2016 — conf
Measuring Usability in Decision Tools Supporting Collaborations for Environmental Disaster Response.
HICSS
Holly T. Ferguson, Sandra Gesing, Jarek Nabrzyski
2016 J jnl
Multi-level meta-workflows: new concept for regularly occurring tasks in quantum chemistry.
J. Cheminformatics
Junaid Arshad, Alexander Hoffmann, Sandra Gesing, Richard Grunzke, Jens Krüger, Tamás Kiss, Sonja Herres-Pawlis, Gábor Terstyánszky
2016 J jnl
Report on the Third Workshop on Sustainable Software for Science: Practice and Experiences (WSSSPE3).
CoRR
Daniel S. Katz, Sou-Cheng T. Choi, Kyle E. Niemeyer, James Hetherington, Frank Löffler, Dan Gunter, Ray Idaszak, Steven R. Brandt, Mark A. Miller, Sandra Gesing, Nick D. Jones, Nic Weber, Suresh Marru, Gabrielle Allen, Birgit Penzenstadler, Colin C. Venters, Ethan Davis, Lorraine J. Hwang, Ilian T. Todorov, Abani K. Patra, Miguel de Val-Borro
2016 J jnl
Science Gateway Workshops 2015 Special Issue Conference Publications.
J. Grid Comput.
Sandra Gesing, Nancy Wilkins-Diehr, Michelle Barker, Gabriele Pierantoni
2016 J jnl
Using Science Gateways for Bridging the Differences between Research Infrastructures.
J. Grid Comput.
Sandra Gesing, Jens Krüger, Richard Grunzke, Sonja Herres-Pawlis, Alexander Hoffmann
2015 C conf
Balancing Thread-Level and Task-Level Parallelism for Data-Intensive Workloads on Clusters and Clouds.
CLUSTER
Olivia Choudhury, Dinesh Rajan, Nicholas L. Hazekamp, Sandra Gesing, Douglas Thain, Scott J. Emrich
2015 J jnl
Developing science gateways for drug discovery in a grid environment.
PeerJ Prepr.
Horacio Pérez Sánchez, Vahid Rezaei Tabar, Vitaliy Mezhuyev, Duhu Man, Jorge Peña-García, Helena den-Haan, Sandra Gesing
2015 B conf
Enhanced Usability of Managing Workflows in an Industrial Data Gateway.
e-Science
Gary A. McGilvary, Malcolm P. Atkinson, Sandra Gesing, Alvaro Aguilera, Richard Grunzke, Eva Sciacca
2015 J jnl
Enhanced Usability of Managing Workflows in an Industrial Data Gateway.
CoRR
Gary A. McGilvary, Malcolm P. Atkinson, Sandra Gesing, Alvaro Aguilera, Richard Grunzke, Eva Sciacca
2015 Misc conf
Enhancing the Usability and Utilization of Accelerated Architectures via Docker.
UCC
Nicholas Haydel, Sandra Gesing, Ian J. Taylor, Gregory R. Madey, Abdul Dakkak, Simon Garcia De Gonzalo, Wen-mei W. Hwu
2015 J jnl
Genomics and Biological Big Data: Facing Current and Future Challenges around Data and Software Sharing and Reproducibility.
CoRR
Sandra Gesing, Thomas Richard Connor, Ian J. Taylor
2015 J jnl
Introduction to the Special Issue on Cloud for Health.
Scalable Comput. Pract. Exp.
Jesús Carretero, Javier García Blas, Sandra Gesing
2015 B conf
Managing Complexity in Distributed Data Life Cycles Enhancing Scientific Discovery.
e-Science
Richard Grunzke, Alvaro Aguilera, Wolfgang E. Nagel, Jens Krüger, Sonja Herres-Pawlis, Alexander Hoffmann, Sandra Gesing
2015 — conf
Overview of XSEDE-PRACE collaborative projects in 2014.
XSEDE
Tabitha K. Samuel, Shunzhou Wan, Peter V. Coveney, Morris Riedel, M. Shahbaz Memon, Sandra Gesing, Nancy Wilkins-Diehr
2015 J jnl
Quantum chemical meta-workflows in MoSGrid.
Concurr. Comput. Pract. Exp.
Sonja Herres-Pawlis, Alexander Hoffmann, Ákos Balaskó, Péter Kacsuk, Georg Birkenheuer, André Brinkmann, Luis de la Garza, Jens Krüger, Sandra Gesing, Richard Grunzke, Gábor Terstyánszky, Noam Weingarten
2015 B conf
Scaling Up Bioinformatics Workflows with Dynamic Job Expansion: A Case Study Using Galaxy and Makeflow.
e-Science
Nicholas L. Hazekamp, Joseph Sarro, Olivia Choudhury, Sandra Gesing, Scott J. Emrich, Douglas Thain
2015 J jnl
Science gateway workshops 2013 special issue conference publications.
Concurr. Comput. Pract. Exp.
Nancy Wilkins-Diehr, Sandra Gesing, Tamás Kiss
2015 J jnl
Science gateway workshops 2014 special issue conference publications.
Concurr. Comput. Pract. Exp.
Sandra Gesing, Nancy Wilkins-Diehr
2015 — conf
Science gateways - leveraging modeling and simulations in HPC infrastructures via increased usability.
HPCS
Sandra Gesing, Rion Dooley, Marlon E. Pierce, Jens Krüger, Richard Grunzke, Sonja Herres-Pawlis, Alexander Hoffmann
2015 J jnl
VectorBase: an updated bioinformatics resource for invertebrate vectors and other organisms related with human diseases.
Nucleic Acids Res.
Gloria I. Giraldo-Calderón, Scott J. Emrich, Robert M. MacCallum, Gareth Maslen, Emmanuel Dialynas, Pantelis Topalis, Nicholas Ho, Sandra Gesing, Gregory R. Madey, Frank H. Collins, Daniel Lawson
2014 — conf
Agriculture Data for All - Integrated Tools for Agriculture Data Integration, Analytics, and Sharing.
BigData Congress
Jarek Nabrzyski, Cheng Liu, Charles Vardeman, Sandra Gesing, Milan Budhatoki
2014 C conf
Device-Driven Metadata Management Solutions for Scientific Big Data Use Cases.
PDP
Richard Grunzke, Jürgen Hesser, Jürgen Starek, Nick Kepper, Sandra Gesing, Marcus Hardt, Volker Hartmann, Stephan Kindermann, Jan Potthoff, Michael Hausmann, Ralph Müller-Pfefferkorn, René Jäkel
2014 B conf
Expanding Tasks of Logical Workflows Into Independent Workflows for Improved Scalability.
CCGRID
Nicholas L. Hazekamp, Olivia Choudhury, Sandra Gesing, Scott J. Emrich, Douglas Thain
2014 — conf
Federated clouds for biomedical research: Integrating OpenStack for ICTBioMed.
CloudNet
Cezary Mazurek, Juliusz Pukacki, Michal Kosiedowski, Szymon Trocha, Michael Sullivan, Hemant Darbari, Amit Saxena, Rajendra Joshi, Devdatt P. Dubhashi, Subazini Thankaswamy, Paul R. Brenner, Sandra Gesing, Jarek Nabrzyski, Anil Srivastava
2014 — conf
Gateways to high-perfomance and distributed computing resources for global health challenges.
IHTC
Sandra Gesing, Jarek Nabrzyski, Shantenu Jha
2014 J jnl
Latest advances in distributed, parallel, and graphic processing unit accelerated approaches to computational biology.
Concurr. Comput. Pract. Exp.
Ivan Merelli, Horacio Emilio Pérez Sánchez, Sandra Gesing, Daniele D'Agostino
2014 — conf
Meta-Metaworkflows for Combining Quantum Chemistry and Molecular Dynamics in the MoSGrid Science Gateway.
IWSG
Sonja Herres-Pawlis, Alexander Hoffmann, Luis de la Garza, Jens Krüger, Sandra Gesing, Richard Grunzke, Wolfgang E. Nagel, Gábor Terstyánszky, Noam Weingarten
2014 — ch.
Molecular Simulation Grid (MosGrid): A Science Gateway Tailored to the Molecular Simulation Community.
Science Gateways for Distributed Computing Infrastructures
Sandra Gesing, Jens Krüger, Richard Grunzke, Luis de la Garza, Sonja Herres-Pawlis, Alexander Hoffmann
2014 — conf
SAMPO: an agent-based mosquito point model in OpenCL.
SpringSim (ADS)
Klaus Kofler, Gregory J. Davis, Sandra Gesing
2014 J jnl
Standards-based metadata management for molecular simulations.
Concurr. Comput. Pract. Exp.
Richard Grunzke, Sebastian Breuers, Sandra Gesing, Sonja Herres-Pawlis, Martin Kruse, Dirk Blunk, Luis de la Garza, Lars Packschies, Patrick Schäfer, Charlotta Schärfe, Tobias Schlemmer, Thomas Steinke, Bernd Schuller, Ralph Müller-Pfefferkorn, René Jäkel, Wolfgang E. Nagel, Malcolm P. Atkinson, Jens Krüger
2014 B conf
Towards Generic Metadata Management in Distributed Science Gateway Infrastructures.
CCGRID
Richard Grunzke, René Jäkel, Wolfgang E. Nagel, Sandra Gesing
2014 — conf
Workflows in a dashboard: a new generation of usability.
WORKS@SC
Sandra Gesing, Malcolm P. Atkinson, Rosa Filgueira, Ian J. Taylor, Andrew Jones, Vlado Stankovski, Chee Sun Liew, Alessandro Spinuso, Gábor Terstyánszky, Péter Kacsuk
2013 J jnl
The MoSGrid - e-science gateway: molecular simulations in a distributed computing environment.
J. Cheminformatics
Lars Packschies, Georg Birkenheuer, Dirk Blunk, Sebastian Breuers, André Brinkmann, Ines dos Santos Vieira, Gregor Fels, Sandra Gesing, Richard Grunzke, Sonja Herres-Pawlis, Oliver Kohlbacher, Jens Krüger, Martin Kruse, Ulrich Lang, Ralph Müller-Pfefferkorn, Patrick Schäfer, Tobias Schlemmer, Thomas Steinke, Klaus-Dieter Warzecha, Andreas Zink
2013 — conf
The demand for consistent web-based workflow editors.
WORKS@SC
Sandra Gesing, Malcolm P. Atkinson, Iraklis A. Klampanos, Michelle Galea, Michael R. Berthold, Roberto Barbera, Diego Scardaci, Gábor Terstyánszky, Tamás Kiss, Péter Kacsuk
2013 — conf
User-Friendly Workflows in Quantum Chemistry.
IWSG
Sonja Herres-Pawlis, Alexander Hoffmann, Sandra Gesing, Jens Krüger, Ákos Balaskó, Péter Kacsuk, Richard Grunzke, Georg Birkenheuer, Lars Packschies
2013 C conf
User-friendly metaworkflows in quantum chemistry.
CLUSTER
Sonja Herres-Pawlis, Alexander Hoffmann, Sandra Gesing, Luis de la Garza, Jens Krüger, Richard Grunzke
2012 J jnl
A Single Sign-On Infrastructure for Science Gateways on a Use Case for Structural Bioinformatics.
J. Grid Comput.
Sandra Gesing, Richard Grunzke, Jens Krüger, Georg Birkenheuer, Martin Wewior, Patrick Schäfer, Bernd Schuller, Johannes Schuster, Sonja Herres-Pawlis, Sebastian Breuers, Ákos Balaskó, Miklos Kozlovszky, Anna Szikszay Fabri, Lars Packschies, Péter Kacsuk, Dirk Blunk, Thomas Steinke, André Brinkmann, Gregor Fels, Ralph Müller-Pfefferkorn, René Jäkel, Oliver Kohlbacher
2012 — ed.
HealthGrid Applications and Technologies Meet Science Gateways for Life Sciences, Proceedings of HealthGrid 2012, Amsterdam, The Netherlands, 21-23 May 2012.
HealthGrid
Sandra Gesing, Tristan Glatard, Jens Krüger, Sílvia Delgado Olabarriaga, Tony Solomonides, Jonathan C. Silverstein, Johan Montagnat, Alban Gaignard, Dagmar Krefting
2012 J jnl
MoSGrid: efficient data management and a standardized data exchange format for molecular simulations in a grid environment.
J. Cheminformatics
Georg Birkenheuer, Dirk Blunk, Sebastian Breuers, André Brinkmann, Ines dos Santos Vieira, Gregor Fels, Sandra Gesing, Richard Grunzke, Sonja Herres-Pawlis, Oliver Kohlbacher, Jens Krüger, Ulrich Lang, Lars Packschies, Ralph Müller-Pfefferkorn, Patrick Schäfer, Thomas Steinke, Klaus-Dieter Warzecha, Martin Wewior
2012 — conf
Workflow-enhanced conformational analysis of guanidine zinc complexes via a science gateway.
HealthGrid
Sonja Herres-Pawlis, Georg Birkenheuer, André Brinkmann, Sandra Gesing, Richard Grunzke, René Jäkel, Oliver Kohlbacher, Jens Krüger, Ines dos Santos Vieira
2012 — conf
Workshop Series IWSG-Life.
HealthGrid
Sandra Gesing, Jens Krüger
2011 — conf
Granular Security for a Science Gateway in Structural Bioinformatics.
IWSG-Life
Sandra Gesing, Richard Grunzke, Ákos Balaskó, Georg Birkenheuer, Dirk Blunk, Sebastian Breuers, André Brinkmann, Gregor Fels, Sonja Herres-Pawlis, Péter Kacsuk, Miklos Kozlovszky, Jens Krüger, Lars Packschies, Patrick Schäfer, Bernd Schuller, Johannes Schuster, Thomas Steinke, Anna Szikszay Fabri, Martin Wewior, Ralph Müller-Pfefferkorn, Oliver Kohlbacher
2011 J jnl
MoSGrid - a molecular simulation grid as a new tool in computational chemistry, biology and material science.
J. Cheminformatics
Georg Birkenheuer, Dirk Blunk, Sebastian Breuers, André Brinkmann, Ines dos Santos Vieira, Gregor Fels, Sandra Gesing, Richard Grunzke, Sonja Herres-Pawlis, Oliver Kohlbacher, Nico Kruber, Jens Krüger, Ulrich Lang, Lars Packschies, Ralph Müller-Pfefferkorn, Patrick Schäfer, Hans-Günther Schmalz, Thomas Steinke, Klaus-Dieter Warzecha, Martin Wewior
2011 J jnl
Molecular simulation grid.
J. Cheminformatics
Jens Krüger, Georg Birkenheuer, Dirk Blunk, Sebastian Breuers, André Brinkmann, Gregor Fels, Sandra Gesing, Richard Grunzke, Oliver Kohlbacher, Nico Kruber, Ulrich Lang, Lars Packschies, Ralph Müller-Pfefferkorn, Sonja Herres-Pawlis, Patrick Schäfer, Hans-Günther Schmalz, Thomas Steinke, Klaus-Dieter Warzecha, Martin Wewior
2011 J jnl
Special Issue: Portals for life sciences - Providing intuitive access to bioinformatic tools.
Concurr. Comput. Pract. Exp.
Sandra Gesing, Jano I. van Hemert, Péter Kacsuk, Oliver Kohlbacher
2010 C conf
Grid-Workflows in Molecular Science.
Software Engineering (Workshops)
Georg Birkenheuer, Sebastian Breuers, André Brinkmann, Dirk Blunk, Gregor Fels, Sandra Gesing, Sonja Herres-Pawlis, Oliver Kohlbacher, Jens Krüger, Lars Packschies
2010 B conf
TOPP goes Rapid The OpenMS Proteomics Pipeline in a Grid-Enabled Web Portal.
CCGRID
Sandra Gesing, Jano I. van Hemert, Jos Koetsier, Andreas Bertsch, Oliver Kohlbacher
2009 — conf
Portals for Life Sciences - a Brief Introduction.
IWPLS
Sandra Gesing, Oliver Kohlbacher, Jano I. van Hemert
2009 — ed.
Proceedings of the International Workshop on Portals for Life Sciences, IWPLS 2009, Edinburgh, UK, September 14-15, 2009
IWPLS
Sandra Gesing, Jano I. van Hemert