Samuel Kerrien

14 papers Misc 1Journal 10Unranked 2
YearRankTypeTitle / Venue / Authors
2023 — conf
Blue Brain Knowledge Graph: Leveraging Semantic Web Technologies for Simulation Neuroscience.
ISWC (Posters/Demos/Industry)
Cristina E. Gonzalez-Espinoza, Anna-Kristin Kaufmann, Eugenia Oshurko, Alejandra Garcia Rojas Martinez, Sarah Mouffok, Konstantinos Platis, Jonathan Lurie, Jayakrishnan Nair, Patrycja Lurie, Silvia Jimenez, Pierre-Alexandre Fonta, Huanxiang Lu, Nabil Alibou, Mohameth-François Sy, Bogdan Roman, Samuel Kerrien, Henry Markram, Sean L. Hill
2023 J jnl
Blue Brain Nexus: An open, secure, scalable system for knowledge graph management and data-driven science.
Semantic Web
Mohameth-François Sy, Bogdan Roman, Samuel Kerrien, Didac Montero Mendez, Henry Genet, Wojciech Wajerowicz, Michaël Dupont, Ian Lavriushev, Julien Machon, Kenneth Pirman, Dhanesh Neela Mana, Natalia Stafeeva, Anna-Kristin Kaufmann, Huanxiang Lu, Jonathan Lurie, Pierre-Alexandre Fonta, Alejandra Garcia Rojas Martinez, Alexander D. Ulbrich, Carolina Lindqvist, Silvia Jimenez, David J. Rotenberg, Henry Markram, Sean L. Hill
2013 J jnl
Capturing cooperative interactions with the PSI-MI format.
Database J. Biol. Databases Curation
Kim Van Roey, Sandra E. Orchard, Samuel Kerrien, Marine Dumousseau, Sylvie Ricard-Blum, Henning Hermjakob, Toby J. Gibson
2013 — conf
The Apoptosis Gene Ontology project and the IntAct-Apoptosis dataset: updating the conceptual representation of apoptosis.
IWBBIO
Pablo Porras, Paola Roncaglia, Emily Dimmer, Jane Lomax, Rachael P. Huntley, Sandra E. Orchard, Marine Dumousseau, Samuel Kerrien, Henning Hermjakob
2012 J jnl
The IntAct molecular interaction database in 2012.
Nucleic Acids Res.
Samuel Kerrien, Bruno Aranda, Lionel Breuza, Alan J. Bridge, Fiona Broackes-Carter, Carol Chen, Margaret J. Duesbury, Marine Dumousseau, Marc Feuermann, Ursula Hinz, Christine Jandrasits, Rafael C. Jiménez, Jyoti Khadake, Usha Mahadevan, Patrick Masson, Ivo Pedruzzi, Eric Pfeiffenberger, Pablo Porras, Arathi Raghunath, Bernd Roechert, Sandra E. Orchard, Henning Hermjakob
2010 — ch.
Molecular Interactions and Data Standardisation.
Proteome Bioinformatics
Sandra E. Orchard, Samuel Kerrien
2010 J jnl
The IntAct molecular interaction database in 2010.
Nucleic Acids Res.
Bruno Aranda, P. Achuthan, Yasmin Alam-Faruque, Irina M. Armean, Alan J. Bridge, C. Derow, Marc Feuermann, A. T. Ghanbarian, Samuel Kerrien, Jyoti Khadake, Jules Kerssemakers, C. Leroy, Michael P. Menden, Magali Michaut, Luisa Montecchi-Palazzi, S. N. Neuhauser, Sandra E. Orchard, V. Perreau, Bernd Roechert, K. van Eijk, Henning Hermjakob
2008 J jnl
InteroPORC: an automated tool to predict highly conserved protein interaction networks.
BMC Bioinform.
Magali Michaut, Samuel Kerrien, Luisa Montecchi-Palazzi, Corinne Cassier-Chauvat, Franck Chauvat, Jean-Christophe Aude, Pierre Legrain, Henning Hermjakob
2008 J jnl
InteroPORC: automated inference of highly conserved protein interaction networks.
Bioinform.
Magali Michaut, Samuel Kerrien, Luisa Montecchi-Palazzi, Franck Chauvat, Corinne Cassier-Chauvat, Jean-Christophe Aude, Pierre Legrain, Henning Hermjakob
2008 J jnl
Rintact: enabling computational analysis of molecular interaction data from the IntAct repository.
Bioinform.
Tony Chiang, Nianhua Li, Sandra E. Orchard, Samuel Kerrien, Henning Hermjakob, Robert Gentleman, Wolfgang Huber
2007 J jnl
IntAct - open source resource for molecular interaction data.
Nucleic Acids Res.
Samuel Kerrien, Yasmin Alam-Faruque, Bruno Aranda, I. Bancarz, Alan J. Bridge, C. Derow, Emily Dimmer, Marc Feuermann, A. Friedrichsen, Rachael P. Huntley, C. Kohler, Jyoti Khadake, C. Leroy, A. Liban, C. Lieftink, Luisa Montecchi-Palazzi, Sandra E. Orchard, Judith E. Risse, Karine Robbe, Bernd Roechert, David Thorneycroft, Y. Zhang, Rolf Apweiler, Henning Hermjakob
2007 J jnl
The Protein Identifier Cross-Referencing (PICR) service: reconciling protein identifiers across multiple source databases.
BMC Bioinform.
Richard G. Côté, Philip Jones, Lennart Martens, Samuel Kerrien, Florian Reisinger, Quan Lin, Rasko Leinonen, Rolf Apweiler, Henning Hermjakob
2006 Misc conf
Development and implementation of the PSI MI standard for molecular interaction.
WSC
Samuel Kerrien, Henning Hermjakob
2004 J jnl
IntAct: an open source molecular interaction database.
Nucleic Acids Res.
Henning Hermjakob, Luisa Montecchi-Palazzi, Chris Lewington, Sugath Mudali, Samuel Kerrien, Sandra E. Orchard, Martin Vingron, Bernd Roechert, Peter Roepstorff, Alfonso Valencia, Hanah Margalit, John Armstrong, Amos Bairoch, Gianni Cesareni, David James Sherman, Rolf Apweiler