Samuel A. Isaacson

14 papers Journal 14
YearRankTypeTitle / Venue / Authors
2026 J jnl
A Macroscopically Consistent Reactive Langevin Dynamics Model.
SIAM J. Appl. Math.
Samuel A. Isaacson, Qianhan Liu, Konstantinos Spiliopoulos, Chen Yao
2025 J jnl
Correction: Catalyst: Fast and flexible modeling of reaction networks.
PLoS Comput. Biol.
Torkel E. Loman, Yingbo Ma, Vasily Ilin, Shashi Gowda, Niklas Korsbo, Nikhil Yewale, Chris Rackauckas, Samuel A. Isaacson
2024 J jnl
An Unstructured Mesh Reaction-Drift-Diffusion Master Equation with Reversible Reactions.
CoRR
Samuel A. Isaacson, Ying Zhang
2023 J jnl
Catalyst: Fast and flexible modeling of reaction networks.
PLoS Comput. Biol.
Torkel E. Loman, Yingbo Ma, Vasily Ilin, Shashi Gowda, Niklas Korsbo, Nikhil Yewale, Chris Rackauckas, Samuel A. Isaacson
2023 J jnl
Extending JumpProcess.jl for fast point process simulation with time-varying intensities.
CoRR
Guilherme Augusto Zagatti, Samuel A. Isaacson, Christopher Rackauckas, Vasily Ilin, See-Kiong Ng, Stéphane Bressan
2022 J jnl
Mean Field Limits of Particle-Based Stochastic Reaction-Diffusion Models.
SIAM J. Math. Anal.
Samuel A. Isaacson, Jingwei Ma, Konstantinos Spiliopoulos
2021 J jnl
How Reaction-Diffusion PDEs Approximate the Large-Population Limit of Stochastic Particle Models.
SIAM J. Appl. Math.
Samuel A. Isaacson, Jingwei Ma, Konstantinos Spiliopoulos
2020 J jnl
Strong intracellular signal inactivation produces sharper and more robust signaling from cell membrane to nucleus.
PLoS Comput. Biol.
Jingwei Ma, Myan Do, Mark A. Le Gros, Charles S. Peskin, Carolyn A. Larabell, Yoichiro Mori, Samuel A. Isaacson
2018 J jnl
An unstructured mesh convergent reaction-diffusion master equation for reversible reactions.
J. Comput. Phys.
Samuel A. Isaacson, Ying Zhang
2016 J jnl
Reactive Boundary Conditions as Limits of Interaction Potentials for Brownian and Langevin Dynamics.
SIAM J. Appl. Math.
S. Jonathan Chapman, Radek Erban, Samuel A. Isaacson
2014 J jnl
A First-Passage Kinetic Monte Carlo method for reaction-drift-diffusion processes.
J. Comput. Phys.
Ava J. Mauro, Jon Karl Sigurdsson, Justin Shrake, Paul J. Atzberger, Samuel A. Isaacson
2011 J jnl
Numerical solution of linear Volterra integral equations of the second kind with sharp gradients.
J. Comput. Appl. Math.
Samuel A. Isaacson, Robert M. Kirby
2009 J jnl
The Reaction-Diffusion Master Equation as an Asymptotic Approximation of Diffusion to a Small Target.
SIAM J. Appl. Math.
Samuel A. Isaacson
2006 J jnl
Incorporating Diffusion in Complex Geometries into Stochastic Chemical Kinetics Simulations.
SIAM J. Sci. Comput.
Samuel A. Isaacson, Charles S. Peskin