Samuel A. Isaacson

14 papers Journal 14

Year	Rank	Type	Title / Venue / Authors
2026	J	`jnl`	A Macroscopically Consistent Reactive Langevin Dynamics Model. SIAM J. Appl. Math. Samuel A. Isaacson, Qianhan Liu, Konstantinos Spiliopoulos, Chen Yao
2025	J	`jnl`	Correction: Catalyst: Fast and flexible modeling of reaction networks. PLoS Comput. Biol. Torkel E. Loman, Yingbo Ma, Vasily Ilin, Shashi Gowda, Niklas Korsbo, Nikhil Yewale, Chris Rackauckas, Samuel A. Isaacson
2024	J	`jnl`	An Unstructured Mesh Reaction-Drift-Diffusion Master Equation with Reversible Reactions. CoRR Samuel A. Isaacson, Ying Zhang
2023	J	`jnl`	Catalyst: Fast and flexible modeling of reaction networks. PLoS Comput. Biol. Torkel E. Loman, Yingbo Ma, Vasily Ilin, Shashi Gowda, Niklas Korsbo, Nikhil Yewale, Chris Rackauckas, Samuel A. Isaacson
2023	J	`jnl`	Extending JumpProcess.jl for fast point process simulation with time-varying intensities. CoRR Guilherme Augusto Zagatti, Samuel A. Isaacson, Christopher Rackauckas, Vasily Ilin, See-Kiong Ng, Stéphane Bressan
2022	J	`jnl`	Mean Field Limits of Particle-Based Stochastic Reaction-Diffusion Models. SIAM J. Math. Anal. Samuel A. Isaacson, Jingwei Ma, Konstantinos Spiliopoulos
2021	J	`jnl`	How Reaction-Diffusion PDEs Approximate the Large-Population Limit of Stochastic Particle Models. SIAM J. Appl. Math. Samuel A. Isaacson, Jingwei Ma, Konstantinos Spiliopoulos
2020	J	`jnl`	Strong intracellular signal inactivation produces sharper and more robust signaling from cell membrane to nucleus. PLoS Comput. Biol. Jingwei Ma, Myan Do, Mark A. Le Gros, Charles S. Peskin, Carolyn A. Larabell, Yoichiro Mori, Samuel A. Isaacson
2018	J	`jnl`	An unstructured mesh convergent reaction-diffusion master equation for reversible reactions. J. Comput. Phys. Samuel A. Isaacson, Ying Zhang
2016	J	`jnl`	Reactive Boundary Conditions as Limits of Interaction Potentials for Brownian and Langevin Dynamics. SIAM J. Appl. Math. S. Jonathan Chapman, Radek Erban, Samuel A. Isaacson
2014	J	`jnl`	A First-Passage Kinetic Monte Carlo method for reaction-drift-diffusion processes. J. Comput. Phys. Ava J. Mauro, Jon Karl Sigurdsson, Justin Shrake, Paul J. Atzberger, Samuel A. Isaacson
2011	J	`jnl`	Numerical solution of linear Volterra integral equations of the second kind with sharp gradients. J. Comput. Appl. Math. Samuel A. Isaacson, Robert M. Kirby
2009	J	`jnl`	The Reaction-Diffusion Master Equation as an Asymptotic Approximation of Diffusion to a Small Target. SIAM J. Appl. Math. Samuel A. Isaacson
2006	J	`jnl`	Incorporating Diffusion in Complex Geometries into Stochastic Chemical Kinetics Simulations. SIAM J. Sci. Comput. Samuel A. Isaacson, Charles S. Peskin