Salvador Ventura

14 papers Journal 14
YearRankTypeTitle / Venue / Authors
2023 J jnl
aSynPEP-DB: a database of biogenic peptides for inhibiting α-synuclein aggregation.
Database J. Biol. Databases Curation
Carlos Pintado-Grima, Oriol Bárcenas, Valentín Iglesias, Jaime Santos, Zoe Manglano-Artuñedo, Irantzu Pallarès, Michal Burdukiewicz, Salvador Ventura
2022 J jnl
A3D database: structure-based predictions of protein aggregation for the human proteome.
Bioinform.
Aleksandra E. Badaczewska-Dawid, Javier Garcia-Pardo, Aleksander Kuriata, Jordi Pujols, Salvador Ventura, Sebastian Kmiecik
2022 J jnl
DisProt in 2022: improved quality and accessibility of protein intrinsic disorder annotation.
Nucleic Acids Res.
Federica Quaglia, Bálint Mészáros, Edoardo Salladini, András Hatos, Rita Pancsa, Lucía B. Chemes, Mátyás Pajkos, Tamas Lazar, Samuel Peña-Díaz, Jaime Santos, Veronika Ács, Nazanin Farahi, Erzsébet Fichó, Maria Cristina Aspromonte, Claudio Bassot, Anastasia Chasapi, Norman E. Davey, Radoslav Davidovic, Laszlo Dobson, Arne Elofsson, Gábor Erdös, Pascale Gaudet, Michelle G. Giglio, Juliana Glavina, Javier Iserte, Valentín Iglesias, Zsófia L. Kálmán, Matteo Lambrughi, Emanuela Leonardi, Sonia Longhi, Sandra Macedo-Ribeiro, Emiliano Maiani, Julia Marchetti, Cristina Marino Buslje, Attila Meszaros, Alexander Miguel Monzon, Giovanni Minervini, Suvarna Nadendla, Juliet F. Nilsson, Marián Novotný, Christos A. Ouzounis, Nicolas Palopoli, Elena Papaleo, Pedro J. Barbosa Pereira, Gabriele Pozzati, Vasilis J. Promponas, Jordi Pujols, Alma Carolina Sanchez Rocha, Martin Salas, Luciana Rodriguez Sawicki, Éva Schád, Aditi Shenoy, Tamás Szaniszló, Konstantinos D. Tsirigos, Nevena Veljkovic, Gustavo D. Parisi, Salvador Ventura, Zsuzsanna Dosztányi, Peter Tompa, Silvio C. E. Tosatto, Damiano Piovesan
2021 J jnl
SolupHred: a server to predict the pH-dependent aggregation of intrinsically disordered proteins.
Bioinform.
Carlos Pintado, Jaime Santos, Valentín Iglesias, Salvador Ventura
2020 J jnl
DisProt: intrinsic protein disorder annotation in 2020.
Nucleic Acids Res.
András Hatos, Borbála Hajdu-Soltész, Alexander Miguel Monzon, Nicolas Palopoli, Lucía Álvarez, Burcu Aykaç Fas, Claudio Bassot, Guillermo I. Benítez, Martina Bevilacqua, Anastasia Chasapi, Lucía B. Chemes, Norman E. Davey, Radoslav Davidovic, A. Keith Dunker, Arne Elofsson, Julien Gobeill, Nicolás S. González Foutel, Govindarajan Sudha, Mainak Guharoy, Tamás Horváth, Valentin Iglesias, Andrey V. Kajava, Orsolya P. Kovács, John Lamb, Matteo Lambrughi, Tamas Lazar, Jeremy Y. Leclercq, Emanuela Leonardi, Sandra Macedo-Ribeiro, Mauricio Macossay-Castillo, Emiliano Maiani, José A. Manso, Cristina Marino Buslje, Elizabeth Martínez-Pérez, Bálint Mészáros, Ivan Micetic, Giovanni Minervini, Nikoletta Murvai, Marco Necci, Christos A. Ouzounis, Mátyás Pajkos, Lisanna Paladin, Rita Pancsa, Elena Papaleo, Gustavo D. Parisi, Emilie Pasche, Pedro J. Barbosa Pereira, Vasilis J. Promponas, Jordi Pujols, Federica Quaglia, Patrick Ruch, Marco Salvatore, Éva Schád, Beáta Szabó, Tamás Szaniszló, Stella Tamana, Ágnes Tantos, Nevena Veljkovic, Salvador Ventura, Wim F. Vranken, Zsuzsanna Dosztányi, Peter Tompa, Silvio C. E. Tosatto, Damiano Piovesan
2019 J jnl
AMYCO: evaluation of mutational impact on prion-like proteins aggregation propensity.
BMC Bioinform.
Valentin Iglesias, Oscar Conchillo-Solé, Cristina Batlle, Salvador Ventura
2019 J jnl
Aggrescan3D (A3D) 2.0: prediction and engineering of protein solubility.
Nucleic Acids Res.
Aleksander Kuriata, Valentin Iglesias, Jordi Pujols, Mateusz Kurcinski, Sebastian Kmiecik, Salvador Ventura
2019 J jnl
Aggrescan3D standalone package for structure-based prediction of protein aggregation properties.
Bioinform.
Aleksander Kuriata, Valentin Iglesias, Mateusz Kurcinski, Salvador Ventura, Sebastian Kmiecik
2017 J jnl
DisProt 7.0: a major update of the database of disordered proteins.
Nucleic Acids Res.
Damiano Piovesan, Francesco Tabaro, Ivan Micetic, Marco Necci, Federica Quaglia, Christopher J. Oldfield, Maria Cristina Aspromonte, Norman E. Davey, Radoslav Davidovic, Zsuzsanna Dosztányi, Arne Elofsson, Alessandra Gasparini, András Hatos, Andrey V. Kajava, Lajos Kalmár, Emanuela Leonardi, Tamas Lazar, Sandra Macedo-Ribeiro, Mauricio Macossay-Castillo, Attila Meszaros, Giovanni Minervini, Nikoletta Murvai, Jordi Pujols, Daniel B. Roche, Edoardo Salladini, Éva Schád, Antoine Schramm, Beáta Szabó, Ágnes Tantos, Fiorella Tonello, Konstantinos D. Tsirigos, Nevena Veljkovic, Salvador Ventura, Wim F. Vranken, Per Warholm, Vladimir N. Uversky, A. Keith Dunker, Sonia Longhi, Peter Tompa, Silvio C. E. Tosatto
2015 J jnl
AGGRESCAN3D (A3D): server for prediction of aggregation properties of protein structures.
Nucleic Acids Res.
Rafael Zambrano, Michal Jamróz, Agata Szczasiuk, Jordi Pujols, Sebastian Kmiecik, Salvador Ventura
2015 J jnl
PrionW: a server to identify proteins containing glutamine/asparagine rich prion-like domains and their amyloid cores.
Nucleic Acids Res.
Rafael Zambrano, Oscar Conchillo-Solé, Valentin Iglesias, Ricard Illa, Frederic Rousseau, Joost Schymkowitz, Raimon Sabate, Xavier Daura, Salvador Ventura
2015 J jnl
What Makes a Protein Sequence a Prion?
PLoS Comput. Biol.
Raimon Sabate, Frederic Rousseau, Joost Schymkowitz, Salvador Ventura
2009 J jnl
Amyloidogenic Regions and Interaction Surfaces Overlap in Globular Proteins Related to Conformational Diseases.
PLoS Comput. Biol.
Virginia Castillo, Salvador Ventura
2007 J jnl
AGGRESCAN: a server for the prediction and evaluation of "hot spots" of aggregation in polypeptides.
BMC Bioinform.
Oscar Conchillo-Solé, Natalia Sanchez de Groot, Francesc X. Avilés, Josep Vendrell, Xavier Daura, Salvador Ventura