Salvador Eugenio C. Caoili

15 papers Journal 2Unranked 13
YearRankTypeTitle / Venue / Authors
2023 — conf
Capturing Solvent-System Effects in B-Cell Epitope Prediction with the HAPTIC3/HEPTAD2 User Toolkit (HUT2).
BCB
Salvador Eugenio C. Caoili
2022 — conf
B-cell epitope prediction for antipeptide paratopes with the HAPTIC2/HEPTAD user toolkit (HUT).
BCB
Salvador Eugenio C. Caoili
2020 — conf
Beyond B-Cell Epitopes: Curating Positive Data on Antipeptide Paratope Binding to Support Development of Computational Tools for Vaccine Design and Other Translational Applications.
BCB
Salvador Eugenio C. Caoili
2019 — conf
Toward a Sequence-Based Physicochemical Approach to Variable-Length B-Cell Epitope Prediction for Antipeptide Paratopes Recognizing Flexibly Disordered Targets: Insights Drawn from Protein Folding Modeled as Polymer Collapse.
BCB
Salvador Eugenio C. Caoili
2018 — conf
Interpreting Negative Data on Antipeptide Paratope Binding to Support Development of B-Cell Epitope Prediction for Vaccine Design and Other Translational Applications.
BCB
Salvador Eugenio C. Caoili
2017 — conf
Development of a Polymer-Theoretic Approach to Describing Constraints on Reactions Between Antipeptide Antibodies and Intrinsically Disordered Peptide Antigens: Implications for B-Cell Epitope Prediction.
BCB
Salvador Eugenio C. Caoili
2016 J jnl
Expressing Redundancy among Linear-Epitope Sequence Data Based on Residue-Level Physicochemical Similarity in the Context of Antigenic Cross-Reaction.
Adv. Bioinformatics
Salvador Eugenio C. Caoili
2016 — conf
Kinetic and Affinity Constraints on Reactions Between Antihapten Antibodies and Nonpeptidic B-Cell Epitopes: Implications for Predicting Antibody-Mediated Modulation of Pharmacokinetics and Pharmacodynamics.
BCB
Salvador Eugenio C. Caoili
2015 — conf
Analogy-based entropic similarity between observations and/or predictions (AESOP): an entropically weighted information-theoretic measure for benchmarking computational accuracy.
BCB
Salvador Eugenio C. Caoili
2014 — conf
An integrative framework for structure-based prediction of biological effects mediated by antipeptide antibodies.
BCB
Salvador Eugenio C. Caoili
2013 — conf
Defining Functional Redundancy of Epitope Data as Potential Antigenic Cross-Reactivity.
BCB
Salvador Eugenio C. Caoili
2012 J jnl
On the Meaning of Affinity Limits in B-Cell Epitope Prediction for Antipeptide Antibody-Mediated Immunity.
Adv. Bioinformatics
Salvador Eugenio C. Caoili
2012 — conf
Using quantitative dose-response data to benchmark B-cell epitope prediction for antipeptide antibodies.
BCB
Salvador Eugenio C. Caoili
2011 — conf
Affinity limits in B-cell epitope prediction for immunity mediated by antipeptide antibodies.
BCB
Salvador Eugenio C. Caoili
2010 — conf
B-cell epitope prediction for peptide-based vaccine design: towards a paradigm of biological outcomes.
BCB
Salvador Eugenio C. Caoili