Saikat Chakrabarti

14 papers Journal 14
YearRankTypeTitle / Venue / Authors
2019 J jnl
Connecting signaling and metabolic pathways in EGF receptor-mediated oncogenesis of glioblastoma.
PLoS Comput. Biol.
Arup K. Bag, Sapan Mandloi, Saulius Jarmalavicius, Susmita Mondal, Krishna Kumar, Chhabinath Mandal, Peter Walden, Saikat Chakrabarti, Chitra Mandal
2015 J jnl
A survey on prediction of specificity-determining sites in proteins.
Briefings Bioinform.
Abhijit Chakraborty, Saikat Chakrabarti
2012 J jnl
DBETH: A Database of Bacterial Exotoxins for Human.
Nucleic Acids Res.
Abhijit Chakraborty, Sudeshna Ghosh, Garisha Chowdhary, Ujjwal Maulik, Saikat Chakrabarti
2012 J jnl
SPEER-SERVER: a web server for prediction of protein specificity determining sites.
Nucleic Acids Res.
Abhijit Chakraborty, Sapan Mandloi, Christopher J. Lanczycki, Anna R. Panchenko, Saikat Chakrabarti
2010 J jnl
State of the art: refinement of multiple sequence alignments.
BMC Bioinform.
Saikat Chakrabarti, Christopher J. Lanczycki, Anna R. Panchenko, Teresa M. Przytycka, Paul A. Thiessen, Stephen H. Bryant
2009 J jnl
Ensemble approach to predict specificity determinants: benchmarking and validation.
BMC Bioinform.
Saikat Chakrabarti, Anna R. Panchenko
2009 J jnl
Identification of structurally conserved residues of proteins in absence of structural homologs using neural network ensemble.
Bioinform.
Ganesan Pugalenthi, E. Ke Tang, Ponnuthurai N. Suganthan, Saikat Chakrabarti
2008 J jnl
MegaMotifBase: a database of structural motifs in protein families and superfamilies.
Nucleic Acids Res.
Ganesan Pugalenthi, Ponnuthurai N. Suganthan, Ramanathan Sowdhamini, Saikat Chakrabarti
2007 J jnl
SMotif: a server for structural motifs in proteins.
Bioinform.
Ganesan Pugalenthi, Ponnuthurai N. Suganthan, Ramanathan Sowdhamini, Saikat Chakrabarti
2006 J jnl
Cascade PSI-BLAST web server: a remote homology search tool for relating protein domains.
Nucleic Acids Res.
Rana Bhadra, Sankaran Sandhya, K. R. Abhinandan, Saikat Chakrabarti, Ramanathan Sowdhamini, Narayanaswamy Srinivasan
2006 J jnl
SSToSS - Sequence-Structural Templates of Single-Member Superfamilies.
Silico Biol.
Saikat Chakrabarti, Gowri Manohari, Ganesan Pugalenthi, Ramanathan Sowdhamini
2006 J jnl
State of the art: refinement of multiple sequence alignments.
BMC Bioinform.
Saikat Chakrabarti, Christopher J. Lanczycki, Anna R. Panchenko, Teresa M. Przytycka, Paul A. Thiessen, Stephen H. Bryant
2005 J jnl
SCANMOT: searching for similar sequences using a simultaneous scan of multiple sequence motifs.
Nucleic Acids Res.
Saikat Chakrabarti, Prem A. Anand, Nitin Bhardwaj, Ganesan Pugalenthi, Ramanathan Sowdhamini
2004 J jnl
Improvement of alignment accuracy utilizing sequentially conserved motifs.
BMC Bioinform.
Saikat Chakrabarti, Nitin Bhardwaj, Prem A. Anand, Ramanathan Sowdhamini