S. Chakra Chennubhotla

13 papers Journal 4Unranked 8

Year	Rank	Type	Title / Venue / Authors
2023	J	`jnl`	#COVIDisAirborne: AI-enabled multiscale computational microscopy of delta SARS-CoV-2 in a respiratory aerosol. Int. J. High Perform. Comput. Appl. Abigail C. Dommer, Lorenzo Casalino, Fiona L. Kearns, Mia A. Rosenfeld, Nicholas Wauer, Surl-Hee Ahn, John Russo, A. Sofia F. Oliveira, Clare Morris, Anthony T. Bogetti, Anda Trifan, Alexander Brace, Terra Sztain, Austin Clyde, Heng Ma, S. Chakra Chennubhotla, Hyungro Lee, Matteo Turilli, Syma Khalid, Teresa Tamayo-Mendoza, Matthew Welborn, Anders S. Christensen, Daniel G. A. Smith, Zhuoran Qiao, Sai K. Sirumalla, Michael O'Connor, Frederick R. Manby, Anima Anandkumar, David J. Hardy, James C. Phillips, Abraham C. Stern, Josh Romero, David Clark, Mitchell Dorrell, Tom Maiden, Lei Huang, John D. McCalpin, Christopher J. Woods, Alan Gray, Matt Williams, Bryan Barker, Harinda Rajapaksha, Richard Pitts, Tom Gibbs, John E. Stone, Daniel M. Zuckerman, Adrian J. Mulholland, Thomas F. Miller III, Shantenu Jha, Arvind Ramanathan, Lillian T. Chong, Rommie E. Amaro
2022	J	`jnl`	Intelligent resolution: Integrating Cryo-EM with AI-driven multi-resolution simulations to observe the severe acute respiratory syndrome coronavirus-2 replication-transcription machinery in action. Int. J. High Perform. Comput. Appl. Anda Trifan, Defne Gorgun, Michael Salim, Zongyi Li, Alexander Brace, Maxim Zvyagin, Heng Ma, Austin Clyde, David Clark, David J. Hardy, Tom Burnley, Lei Huang, John D. McCalpin, Murali Emani, Hyenseung Yoo, Junqi Yin, Aristeidis Tsaris, Vishal Subbiah, Tanveer Raza, Jessica Liu, Noah Trebesch, Geoffrey Wells, Venkatesh Mysore, Tom Gibbs, James C. Phillips, S. Chakra Chennubhotla, Ian T. Foster, Rick Stevens, Anima Anandkumar, Venkatram Vishwanath, John E. Stone, Emad Tajkhorshid, Sarah A. Harris, Arvind Ramanathan
2021	—	`conf`	Classification of Diffuse Subcellular Morphologies. SciPy Neelima Pulagam, Marcus Hill, Mojtaba Sedigh Fazli, Rachel Mattson, Meekail Zain, Andrew Durden, Frederick D. Quinn, S. Chakra Chennubhotla, Shannon P. Quinn
2021	—	`conf`	Prototypical Models for Classifying High-Risk Atypical Breast Lesions. MICCAI (8) Akash Parvatikar, Om Choudhary, Arvind Ramanathan, Rebekah Jenkins, Olga Navolotskaia, Gloria Carter, Akif Burak Tosun, Jeffrey L. Fine, S. Chakra Chennubhotla
2020	J	`jnl`	Artificial intelligence techniques for integrative structural biology of intrinsically disordered proteins. CoRR Arvind Ramanathan, Heng Ma, Akash Parvatikar, S. Chakra Chennubhotla
2020	—	`conf`	Classifying Nuclei Shape Heterogeneity in Breast Tumors with Skeletons. ECCV Workshops (1) Brian Falkenstein, Adriana Kovashka, Seong Jae Hwang, S. Chakra Chennubhotla
2020	—	`ch.`	HistoMapr AI and ML for Digital Pathology Akif Burak Tosun, Filippo Pullara, Michael J. Becich, D. Lansing Taylor, S. Chakra Chennubhotla, Jeffrey L. Fine
2020	—	`conf`	Modeling Histological Patterns for Differential Diagnosis of Atypical Breast Lesions. MICCAI (5) Akash Parvatikar, Om Choudhary, Arvind Ramanathan, Olga Navolotskaia, Gloria Carter, Akif Burak Tosun, Jeffrey L. Fine, S. Chakra Chennubhotla
2020	—	`conf`	Spectral Analysis of Mitochondrial Dynamics: A Graph-Theoretic Approach to Understanding Subcellular Pathology. SciPy Marcus Hill, Mojtaba Sedigh Fazli, Rachel Mattson, Meekail Zain, Andrew Durden, Allyson T. Loy, Barbara Reaves, Abigail Courtney, Frederick D. Quinn, S. Chakra Chennubhotla, Shannon P. Quinn
2018	—	`conf`	Dynamic Social Network Modeling of Diffuse Subcellular Morphologies. SciPy Andrew Durden, Allyson T. Loy, Barbara Reaves, Mojtaba Sedigh Fazli, Abigail Courtney, Frederick D. Quinn, S. Chakra Chennubhotla, Shannon P. Quinn
2017	—	`conf`	Architectural patterns for differential diagnosis of proliferative breast lesions from histopathological images. ISBI Luong Nguyen, Akif Burak Tosun, Jeffrey L. Fine, D. Lansing Taylor, S. Chakra Chennubhotla
2017	—	`conf`	Histological Detection of High-Risk Benign Breast Lesions from Whole Slide Images. MICCAI (2) Akif Burak Tosun, Luong Nguyen, Nathan Ong, Olga Navolotskaia, Gloria Carter, Jeffrey L. Fine, D. Lansing Taylor, S. Chakra Chennubhotla
2017	J	`jnl`	Spatial Statistics for Segmenting Histological Structures in H&E Stained Tissue Images. IEEE Trans. Medical Imaging Luong Nguyen, Akif Burak Tosun, Jeffrey L. Fine, Adrian V. Lee, D. Lansing Taylor, S. Chakra Chennubhotla