Ruslan N. Sharipov

11 papers Journal 11
YearRankTypeTitle / Venue / Authors
2022 J jnl
BioUML - towards a universal research platform.
Nucleic Acids Res.
Fedor A. Kolpakov, Ilya R. Akberdin, Ilya Kiselev, Semyon Kolmykov, Yury V. Kondrakhin, Mikhail Kulyashov, Elena Kutumova, Sergey S. Pintus, Anna Ryabova, Ruslan N. Sharipov, Ivan S. Yevshin, Sergey Zhatchenko, Alexander E. Kel
2021 J jnl
GTRD: an integrated view of transcription regulation.
Nucleic Acids Res.
Semyon Kolmykov, Ivan S. Yevshin, Mikhail Kulyashov, Ruslan N. Sharipov, Yury V. Kondrakhin, Vsevolod J. Makeev, Ivan V. Kulakovskiy, Alexander E. Kel, Fedor A. Kolpakov
2019 J jnl
BioUML: an integrated environment for systems biology and collaborative analysis of biomedical data.
Nucleic Acids Res.
Fedor A. Kolpakov, Ilya R. Akberdin, Timur A. Kashapov, llya Kiselev, Semyon Kolmykov, Yury V. Kondrakhin, Elena Kutumova, Nikita Mandrik, Sergey S. Pintus, Anna Ryabova, Ruslan N. Sharipov, Ivan S. Yevshin, Alexander E. Kel
2019 J jnl
GTRD: a database on gene transcription regulation - 2019 update.
Nucleic Acids Res.
Ivan S. Yevshin, Ruslan N. Sharipov, Semyon Kolmykov, Yury V. Kondrakhin, Fedor A. Kolpakov
2018 J jnl
Comparative analysis of protein-coding and long non-coding transcripts based on RNA sequence features.
J. Bioinform. Comput. Biol.
Oxana A. Volkova, Yury V. Kondrakhin, Timur A. Kashapov, Ruslan N. Sharipov
2018 J jnl
HOCOMOCO: towards a complete collection of transcription factor binding models for human and mouse via large-scale ChIP-Seq analysis.
Nucleic Acids Res.
Ivan V. Kulakovskiy, Ilya E. Vorontsov, Ivan S. Yevshin, Ruslan N. Sharipov, Alla D. Fedorova, Eugene I. Rumynskiy, Yulia A. Medvedeva, Arturo Magana-Mora, Vladimir B. Bajic, Dmitri A. Papatsenko, Fedor A. Kolpakov, Vsevolod J. Makeev
2017 J jnl
GTRD: a database of transcription factor binding sites identified by ChIP-seq experiments.
Nucleic Acids Res.
Ivan S. Yevshin, Ruslan N. Sharipov, Tagir F. Valeev, Alexander E. Kel, Fedor A. Kolpakov
2016 J jnl
Assessment of translational importance of mammalian mRNA sequence features based on Ribo-Seq and mRNA-Seq data.
J. Bioinform. Comput. Biol.
Oxana A. Volkova, Yury V. Kondrakhin, Ivan S. Yevshin, Tagir F. Valeev, Ruslan N. Sharipov
2013 J jnl
Model composition through model reduction: a combined model of CD95 and NF-κ.
BMC Syst. Biol.
Elena Kutumova, Andrei Yu. Zinovyev, Ruslan N. Sharipov, Fedor A. Kolpakov
2008 J jnl
Identification of Differentially Expressed Genes by Meta-Analysis of Microarray Data on Breast Cancer.
Silico Biol.
Yury V. Kondrakhin, Ruslan N. Sharipov, Alexander E. Kel, Fedor A. Kolpakov
2007 J jnl
CYCLONET - an integrated database on cell cycle regulation and carcinogenesis.
Nucleic Acids Res.
Fedor A. Kolpakov, Vladimir Poroikov, Ruslan N. Sharipov, Yury V. Kondrakhin, Alexey V. Zakharov, Alexey Lagunin, Luciano Milanesi, Alexander E. Kel