Ruixin Zhu

21 papers A* 1Journal 20
YearRankTypeTitle / Venue / Authors
2024 J jnl
CyclicPepedia: a knowledge base of natural and synthetic cyclic peptides.
Briefings Bioinform.
Lei Liu, Liu Yang, Suqi Cao, Zhigang Gao, Bin Yang, Guoqing Zhang, Ruixin Zhu, Dingfeng Wu
2024 J jnl
NAFLDkb: A Knowledge Base and Platform for Drug Development against Nonalcoholic Fatty Liver Disease.
J. Chem. Inf. Model.
Tingjun Xu, Wenxing Gao, Lixin Zhu, Wanning Chen, Chaoqun Niu, Wenjing Yin, Liangxiao Ma, Xinyue Zhu, Yunchao Ling, Sheng Gao, Lei Liu, Na Jiao, Weiming Chen, Guoqing Zhang, Ruixin Zhu, Dingfeng Wu
2021 J jnl
Dr AFC: drug repositioning through anti-fibrosis characteristic.
Briefings Bioinform.
Dingfeng Wu, Wenxing Gao, Xiaoyi Li, Chuan Tian, Na Jiao, Sa Fang, Jing Xiao, Zhifeng Xu, Lixin Zhu, Guoqing Zhang, Ruixin Zhu
2017 J jnl
The recent progress in proteochemometric modelling: focusing on target descriptors, cross-term descriptors and application scope.
Briefings Bioinform.
Tianyi Qiu, Jingxuan Qiu, Jun Feng, Dingfeng Wu, Yiyan Yang, Kailin Tang, Zhiwei Cao, Ruixin Zhu
2016 J jnl
Connection Map for Compounds (CMC): A Server for Combinatorial Drug Toxicity and Efficacy Analysis.
J. Chem. Inf. Model.
Lei Liu, Maria Tsompana, Yong Wang, Dingfeng Wu, Lixin Zhu, Ruixin Zhu
2016 J jnl
bSiteFinder, an improved protein-binding sites prediction server based on structural alignment: more accurate and less time-consuming.
J. Cheminformatics
Jun Gao, Qingchen Zhang, Min Liu, Lixin Zhu, Dingfeng Wu, Zhiwei Cao, Ruixin Zhu
2015 J jnl
When drug discovery meets web search: Learning to Rank for ligand-based virtual screening.
J. Cheminformatics
Wei Zhang, Lijuan Ji, Yanan Chen, Kailin Tang, Haiping Wang, Ruixin Zhu, Wei Jia, Zhiwei Cao, Qi Liu
2014 J jnl
Reconsideration of
Briefings Bioinform.
Qi Liu, Han Zhou, Ruixin Zhu, Ying Xu, Zhiwei Cao
2014 J jnl
SEPPA 2.0 - more refined server to predict spatial epitope considering species of immune host and subcellular localization of protein antigen.
Nucleic Acids Res.
Tao Qi, Tianyi Qiu, Qingchen Zhang, Kailin Tang, Yangyang Fan, Jingxuan Qiu, Dingfeng Wu, Wei Zhang, Yanan Chen, Jun Gao, Ruixin Zhu, Zhiwei Cao
2014 J jnl
iPEAP: integrating multiple omics and genetic data for pathway enrichment analysis.
Bioinform.
Haoqi Sun, Haiping Wang, Ruixin Zhu, Kailin Tang, Qin Gong, Juan Cui, Zhiwei Cao, Qi Liu
2013 J jnl
HIM-herbal ingredients in-vivo metabolism database.
J. Cheminformatics
Hong Kang, Kailin Tang, Qi Liu, Yi Sun, Qi Huang, Ruixin Zhu, Jun Gao, Duanfeng Zhang, Chenggang Huang, Zhiwei Cao
2013 J jnl
Towards a bioinformatics analysis of anti-Alzheimer's herbal medicines from a target network perspective.
Briefings Bioinform.
Yi Sun, Ruixin Zhu, Hao Ye, Kailin Tang, Jing Zhao, Yujia Chen, Qi Liu, Zhiwei Cao
2012 J jnl
Integrated QSAR study for inhibitors of hedgehog signal pathway against multiple cell lines: a collaborative filtering method.
BMC Bioinform.
Jun Gao, Dongsheng Che, Vincent Wenchen Zheng, Ruixin Zhu, Qi Liu
2012 J jnl
Quantitatively integrating molecular structure and bioactivity profile evidence into drug-target relationship analysis.
BMC Bioinform.
Tianlei Xu, Ruixin Zhu, Qi Liu, Zhi-Wei Cao
2012 J jnl
Screening of selective histone deacetylase inhibitors by proteochemometric modeling.
BMC Bioinform.
Dingfeng Wu, Qi Huang, Yida Zhang, Qingchen Zhang, Qi Liu, Jun Gao, Zhi-Wei Cao, Ruixin Zhu
2012 J jnl
Virtual Drug Screen Schema Based on Multiview Similarity Integration and Ranking Aggregation.
J. Chem. Inf. Model.
Hong Kang, Zhen Sheng, Ruixin Zhu, Qi Huang, Qi Liu, Zhiwei Cao
2011 J jnl
A new protein-ligand binding sites prediction method based on the integration of protein sequence conservation information.
BMC Bioinform.
Tianli Dai, Qi Liu, Jun Gao, Zhiwei Cao, Ruixin Zhu
2011 J jnl
Discrimination of Approved Drugs from Experimental Drugs by Learning Methods.
BMC Bioinform.
Kailin Tang, Ruixin Zhu, Yixue Li, Zhi-Wei Cao
2011 J jnl
HIT: linking herbal active ingredients to targets.
Nucleic Acids Res.
Hao Ye, Li Ye, Hong Kang, Duanfeng Zhang, Lin Tao, Kailin Tang, Xueping Liu, Ruixin Zhu, Qi Liu, Yuzong Chen, Yixue Li, Zhi-Wei Cao
2011 J jnl
Multi-target QSAR Modelling in the Analysis and Design of HIV-HCV Co-Inhibitors : An In-silico Study.
BMC Bioinform.
Qi Liu, Han Zhou, Lin Liu, Xi Chen, Ruixin Zhu, Zhi-Wei Cao
2010 A* conf
Transfer Learning on Heterogenous Feature Spaces via Spectral Transformation.
ICDM
Xiaoxiao Shi, Qi Liu, Wei Fan, Philip S. Yu, Ruixin Zhu