Rui-Fen Cao

11 papers Journal 9Unranked 2
YearRankTypeTitle / Venue / Authors
2026 J jnl
DMDGRN: A data augmentation-based multilayer directed graph convolutional network for gene regulatory network inference.
J. Biomed. Informatics
Pi-Jing Wei, Mingzhu Sun, Zheng Ding, Rui-Fen Cao, Zhen Gao, Chun-Hou Zheng
2025 J jnl
AttentionGRN: a functional and directed graph transformer for gene regulatory network reconstruction from scRNA-seq data.
Briefings Bioinform.
Zhen Gao, Yansen Su, Jin Tang, Huaiwan Jin, Yun Ding, Rui-Fen Cao, Pi-Jing Wei, Chun-Hou Zheng
2025 J jnl
MLGCN-Driver: a cancer driver gene identification method based on multi-layer graph convolutional neural network.
BMC Bioinform.
Pi-Jing Wei, Jingxin Zhou, Rui-Fen Cao, Yun Ding, Zhenyu Yue, Chun-Hou Zheng
2024 J jnl
DeepFGRN: inference of gene regulatory network with regulation type based on directed graph embedding.
Briefings Bioinform.
Zhen Gao, Yansen Su, Junfeng Xia, Rui-Fen Cao, Yun Ding, Chun-Hou Zheng, Pi-Jing Wei
2024 J jnl
Inference of gene regulatory networks based on directed graph convolutional networks.
Briefings Bioinform.
Pi-Jing Wei, Ziqiang Guo, Zhen Gao, Zheng Ding, Rui-Fen Cao, Yansen Su, Chun-Hou Zheng
2024 J jnl
MEFFGRN: Matrix enhancement and feature fusion-based method for reconstructing the gene regulatory network of epithelioma papulosum cyprini cells by spring viremia of carp virus infection.
Comput. Biol. Medicine
Pi-Jing Wei, Jin-Jin Bao, Zhen Gao, Jing-Yun Tan, Rui-Fen Cao, Yansen Su, Chun-Hou Zheng, Li Deng
2023 — conf
Prediction of Cancer Driver Genes Based on Pyramidal Dynamic Mapping Algorithm.
ICIC (3)
Pi-Jing Wei, Shu-Li Zhou, Rui-Fen Cao, Yansen Su, Chun-Hou Zheng
2022 J jnl
Extra Trees Method for Predicting LncRNA-Disease Association Based On Multi-Layer Graph Embedding Aggregation.
IEEE ACM Trans. Comput. Biol. Bioinform.
Qing-Wen Wu, Rui-Fen Cao, Jun-Feng Xia, Jian-Cheng Ni, Chunhou Zheng, Yan-Sen Su
2021 J jnl
Double matrix completion for circRNA-disease association prediction.
BMC Bioinform.
Zong-Lan Zuo, Rui-Fen Cao, Pi-Jing Wei, Jun-Feng Xia, Chun-Hou Zheng
2021 J jnl
Identification of driver genes based on gene mutational effects and network centrality.
BMC Bioinform.
Yun-Yun Tang, Pi-Jing Wei, Jian-ping Zhao, Junfeng Xia, Rui-Fen Cao, Chun-Hou Zheng
2020 — conf
Discovery of Cancer Subtypes Based on Stacked Autoencoder.
ICIC (3)
Bo Zhang, Rui-Fen Cao, Jing Wang, Chunhou Zheng