Rosa Aghdam

13 papers Journal 13
YearRankTypeTitle / Venue / Authors
2026 J jnl
MiNAA-WebApp: A web-based tool for the visualization and analysis of microbiome networks.
SoftwareX
Qiyao Yang, Rosa Aghdam, Reed Nelson, Claudia R. Solís-Lemus
2025 J jnl
HighDimMixedModels.jl: Robust high-dimensional mixed-effects models across omics data.
PLoS Comput. Biol.
Evan Gorstein, Rosa Aghdam, Claudia R. Solís-Lemus
2024 J jnl
AFITbin: a metagenomic contig binning method using aggregate l-mer frequency based on initial and terminal nucleotides.
BMC Bioinform.
Amin Darabi, Sayeh Sobhani, Rosa Aghdam, Changiz Eslahchi
2024 J jnl
GAEM: Genetic Algorithm based Expectation-Maximization for inferring Gene Regulatory Networks from incomplete data.
Comput. Biol. Medicine
Parisa Niloofar, Rosa Aghdam, Changiz Eslahchi
2024 J jnl
Human limits in machine learning: prediction of potato yield and disease using soil microbiome data.
BMC Bioinform.
Rosa Aghdam, Xudong Tang, Shan Shan, Richard Lankau, Claudia R. Solís-Lemus
2024 J jnl
MiNAA: Microbiome Network Alignment Algorithm.
J. Open Source Softw.
Reed Nelson, Rosa Aghdam, Claudia R. Solís-Lemus
2023 J jnl
Human Limits in Machine Learning: Prediction of Plant Phenotypes Using Soil Microbiome Data.
CoRR
Rosa Aghdam, Xudong Tang, Shan Shan, Richard Lankau, Claudia R. Solís-Lemus
2023 J jnl
wpLogicNet: logic gate and structure inference in gene regulatory networks.
Bioinform.
Seyed Amir Malekpour, Maryam Shahdoust, Rosa Aghdam, Mehdi Sadeghi
2021 J jnl
A neural network-based method for polypharmacy side effects prediction.
BMC Bioinform.
Raziyeh Masumshah, Rosa Aghdam, Changiz Eslahchi
2021 J jnl
Using informative features in machine learning based method for COVID-19 drug repurposing.
J. Cheminformatics
Rosa Aghdam, Mahnaz Habibi, Golnaz Taheri
2019 J jnl
Some node ordering methods for the K2 algorithm.
Comput. Intell.
Rosa Aghdam, Vahid Rezaei Tabar, Hamid Pezeshk
2017 J jnl
The Ability of Different Imputation Methods to Preserve the Significant Genes and Pathways in Cancer.
Genom. Proteom. Bioinform.
Rosa Aghdam, Taban Baghfalaki, Pegah Khosravi, Elnaz Saberi Ansari
2013 J jnl
A clustering approach for estimating parameters of a profile hidden Markov model.
Int. J. Data Min. Bioinform.
Rosa Aghdam, Hamid Pezeshk, Seyed Amir Malekpour, Soudabeh Shemehsavar, Changiz Eslahchi