Ron Henkel

37 papers Journal 16Unranked 19
YearRankTypeTitle / Venue / Authors
2026 J jnl
FAIR Data Workflow Implementation and Assessment for Ion-Exchange Chromatography in Plasma Science.
Data Sci. J.
Robert Wagner, Ron Henkel, Markus M. Becker, Kristina Yordanova, Dagmar Waltemath
2025 — conf
A Knowledge Graph for Enhanced Study Discovery and Semantic Exploration.
SWAT4HCLS
Lea Gütebier, Dagmar Waltemath, Ron Henkel
2025 — conf
Demonstrating Study Discovery and Exploration Through a Knowledge Graph.
SWAT4HCLS
Lea Gütebier, Dagmar Waltemath, Ron Henkel
2025 — conf
Demonstration: The MeDaX-KG on FHIR.
SWAT4HCLS
Ilya Mazein, Tom Gebhardt, Sebastian Berthe, Kai Fitzer, Ron Henkel, Markus Mandalka, Seyed Reza Mazlooman, Lea Michaelis, Dagmar Waltemath, Benjamin Winter, Judith A. H. Wodke
2024 J jnl
Graph databases in systems biology: a systematic review.
Briefings Bioinform.
Ilya Mazein, Adrien Rougny, Alexander Mazein, Ron Henkel, Lea Gütebier, Lea Michaelis, Marek Ostaszewski, Reinhard Schneider, Venkata P. Satagopam, Lars Juhl Jensen, Dagmar Waltemath, Judith A. H. Wodke, Irina Balaur
2024 — conf
MeDaX Prototype v0.2.
SWAT4HCLS
Ilya Mazein, Sarah Braun, Tom Gebhardt, Ron Henkel, Lea Michaelis, Dagmar Waltemath, Judith A. H. Wodke
2024 — conf
MeDaX: A Knowledge Graph on FHIR.
MIE
Ilya Mazein, Tom Gebhardt, Lea Michaelis, Dagmar Waltemath, Ron Henkel
2023 — conf
Contributions to the reuse and reproducibility of computational biology models.
SWAT4HCLS
Ron Henkel, Dagmar Waltemath
2023 — conf
Exploring New Possibilities for Research Data Exploration Using the Example of the German Core Data Set.
MIE
Felix Menzel, Dagmar Waltemath, Ron Henkel
2023 — conf
Exploring Use Cases for CovidGraph.
MIE
Lea Gütebier, Ron Henkel, Christian Niklas, Dagmar Waltemath
2023 — conf
MeDaX project plan: How to sustainably improve biomedical (research) data management.
SWAT4HCLS
Judith A. H. Wodke, Ron Henkel, Dagmar Waltemath
2023 — conf
TAPP: Defining standard provenance information for clinical research data and workflows - Obstacles and opportunities.
WWW (Companion Volume)
Kerstin Gierend, Judith A. H. Wodke, Sascha Genehr, Robert Gött, Ron Henkel, Frank Krüger, Markus Mandalka, Lea Michaelis, Alexander Scheuerlein, Max Schröder, Atinkut Zeleke, Dagmar Waltemath
2023 — conf
The MeDaX Knowledge Graph Prototype.
MIE
Judith A. H. Wodke, Lea Michaelis, Ron Henkel
2022 — —
Contributions to the reuse and reproducibility of computational biology models
Ron Henkel
2022 — conf
CovidGraph: Integrating COVID-19 Data.
MIE
Ron Henkel, Lea Gütebier, Dagmar Waltemath
2022 J jnl
CovidGraph: a graph to fight COVID-19.
Bioinform.
Lea Gütebier, Tim Bleimehl, Ron Henkel, Jamie Munro, Sebastian Müller, Axel Morgner, Jakob Laenge, Anke Pachauer, Alexander Erdl, Jens Weimar, Kirsten Walther Langendorf, Vincent Vialard, Thorsten Liebig, Martin Preusse, Dagmar Waltemath, Alexander Jarasch
2021 — conf
COVIDGraph: Connecting Biomedical COVID-19 Resources and Computational Biology Models.
SEA-Data@VLDB
Martin Preusse, Alexander Jarasch, Tim Bleimehl, Sebastian Müller, Jamie Munro, Lea Gütebier, Ron Henkel, Dagmar Waltemath
2018 J jnl
Identifying frequent patterns in biochemical reaction networks - a workflow.
PeerJ Prepr.
Fabienne Lambusch, Dagmar Waltemath, Olaf Wolkenhauer, Kurt Sandkuhl, Christian Rosenke, Ron Henkel
2018 J jnl
Identifying frequent patterns in biochemical reaction networks: a workflow.
Database J. Biol. Databases Curation
Fabienne Lambusch, Dagmar Waltemath, Olaf Wolkenhauer, Kurt Sandkuhl, Christian Rosenke, Ron Henkel
2018 J jnl
Notions of similarity for systems biology models.
Briefings Bioinform.
Ron Henkel, Robert Hoehndorf, Tim Kacprowski, Christian Knüpfer, Wolfram Liebermeister, Dagmar Waltemath
2017 J jnl
Identifying frequent patterns in biochemical reaction networks - a workflow.
PeerJ Prepr.
Fabienne Lambusch, Dagmar Waltemath, Olaf Wolkenhauer, Kurt Sandkuhl, Christian Rosenke, Ron Henkel
2017 J jnl
Notions of similarity for systems biology models.
Briefings Bioinform.
Ron Henkel, Robert Hoehndorf, Tim Kacprowski, Christian Knüpfer, Wolfram Liebermeister, Dagmar Waltemath
2016 J jnl
Finding patterns in biochemical reaction networks.
PeerJ Prepr.
Ron Henkel, Fabienne Lambusch, Olaf Wolkenhauer, Kurt Sandkuhl, Christian Rosenke, Dagmar Waltemath
2016 J jnl
STON: exploring biological pathways using the SBGN standard and graph databases.
BMC Bioinform.
Vasundra Touré, Alexander Mazein, Dagmar Waltemath, Irina Balaur, Mansoor A. S. Saqi, Ron Henkel, Johann Pellet, Charles Auffray
2015 J jnl
Annotation-based feature extraction from sets of SBML models.
J. Biomed. Semant.
Rebekka Alm, Dagmar Waltemath, Markus Wolfien, Olaf Wolkenhauer, Ron Henkel
2015 J jnl
Combining computational models, semantic annotations and simulation experiments in a graph database.
Database J. Biol. Databases Curation
Ron Henkel, Olaf Wolkenhauer, Dagmar Waltemath
2015 J jnl
Finding pattern in biochemical reaction networks - a sub-graph mining approach.
PeerJ Prepr.
Ron Henkel, Fabienne Lambusch, Dagmar Waltemath
2015 — conf
Supporting situation awareness of dementia patients in outdoor environments.
PervasiveHealth
Philipp Koldrack, Ron Henkel, Frank Krüger, Stefan J. Teipel, Thomas Kirste
2014 — conf
Annotation-Based Feature Extraction from Sets of SBML Models.
DILS
Rebekka Alm, Dagmar Waltemath, Olaf Wolkenhauer, Ron Henkel
2014 — ch.
Information Retrieval in Life Sciences: A Programmatic Survey.
Approaches in Integrative Bioinformatics
Matthias Lange, Ron Henkel, Wolfgang Müller, Dagmar Waltemath, Stephan Weise
2014 — conf
MaSyMoS: Finding Hidden Treasures in Model Repositories.
SWAT4LS
Ron Henkel, Dagmar Waltemath
2013 J jnl
Improving the reuse of computational models through version control.
Bioinform.
Dagmar Waltemath, Ron Henkel, Robert Hälke, Martin Scharm, Olaf Wolkenhauer
2012 — conf
Considerations of graph-based concepts to manage of computational biology models and associated simulations.
GI-Jahrestagung
Ron Henkel, Nicolas Le Novère, Olaf Wolkenhauer, Dagmar Waltemath
2011 J jnl
Das Sombi-Framework zum Ermitteln geeigneter Suchfunktionen für biologische Modelldatenbasen.
Datenbank-Spektrum
Dagmar Waltemath, Ron Henkel, Holger Meyer, Andreas Heuer
2010 — conf
Distributed Information Retrieval of Computational Biological Models.
AlgoSyn
Ron Henkel
2010 J jnl
Ranked retrieval of Computational Biology models.
BMC Bioinform.
Ron Henkel, Lukas Endler, André Peters, Nicolas Le Novère, Dagmar Waltemath
2009 — conf
Towards Enhanced Retrieval of Biological Models through Annotation-Based Ranking.
DILS
Dagmar Köhn, Carsten Maus, Ron Henkel, Martin Kolbe