Robert W. Cottingham

13 papers A* 1A 1Journal 8Unranked 3
YearRankTypeTitle / Venue / Authors
2025 A conf
A Tale from the Trenches: Applying Metamorphic and Differential Testing to Bioinformatics Software.
ICST
Alexis L. Marsh, Myra B. Cohen, Robert W. Cottingham
2023 — conf
CORE: Comparable, Open, Reliable, Extensible Software: An Experience Report of Four Flux Balance Analysis Tools.
BCB
Alexis L. Marsh, Myra B. Cohen, Robert W. Cottingham
2021 J jnl
The ModelSEED Biochemistry Database for the integration of metabolic annotations and the reconstruction, comparison and analysis of metabolic models for plants, fungi and microbes (Corrigendum).
Nucleic Acids Res.
Samuel M. D. Seaver, Filipe Liu, Qizhi Zhang, James G. Jeffryes, José P. Faria, Janaka N. Edirisinghe, Michael B. Mundy, Nicholas Chia, Elad Noor, Moritz Emanuel Beber, Aaron A. Best, Matthew DeJongh, Jeffrey A. Kimbrel, Patrik D'haeseleer, Sean R. McCorkle, Jay R. Bolton, Erik Pearson, Shane Canon, Elisha M. Wood-Charlson, Robert W. Cottingham, Adam P. Arkin, Christopher S. Henry
2021 J jnl
The ModelSEED Biochemistry Database for the integration of metabolic annotations and the reconstruction, comparison and analysis of metabolic models for plants, fungi and microbes.
Nucleic Acids Res.
Samuel M. D. Seaver, Filipe Liu, Qizhi Zhang, James G. Jeffryes, José P. Faria, Janaka N. Edirisinghe, Michael B. Mundy, Nicholas Chia, Elad Noor, Moritz Emanuel Beber, Aaron A. Best, Matthew DeJongh, Jeffrey A. Kimbrel, Patrik D'haeseleer, Sean R. McCorkle, Jay R. Bolton, Erik Pearson, Shane Canon, Elisha M. Wood-Charlson, Robert W. Cottingham, Adam P. Arkin, Christopher S. Henry
2018 A* conf
Navigating the maze: the impact of configurability in bioinformatics software.
ASE
Mikaela Cashman, Myra B. Cohen, Priya Ranjan, Robert W. Cottingham
2015 — conf
The DOE systems biology knowledgebase (KBase): progress towards a system for collaborative and reproducible inference and modeling of biological function.
BCB
Robert W. Cottingham
2014 — conf
The DOE systems biology knowledgebase (KBase): progress towards a system for collaborative and reproducible inference and modeling of biological function.
BCB
Robert W. Cottingham
2011 J jnl
Scenario driven data modelling: a method for integrating diverse sources of data and data streams.
BMC Bioinform.
Shelton D. Griffith, Daniel Quest, Thomas S. Brettin, Robert W. Cottingham
2010 J jnl
Next generation models for storage and representation of microbial biological annotation.
BMC Bioinform.
Daniel Quest, Miriam L. Land, Thomas S. Brettin, Robert W. Cottingham
2000 J jnl
Mouse-human Comparative Map Resources on the Web.
Briefings Bioinform.
Beth K. Gatewood, Robert W. Cottingham
1998 J jnl
GDB: the Human Genome Database.
Nucleic Acids Res.
Stanley Letovsky, Robert W. Cottingham, Christopher J. Porter, Peter W. D. Li
1997 J jnl
The GDB Human Genome Database Anno 1997.
Nucleic Acids Res.
Kenneth H. Fasman, Stanley Letovsky, Peter W. D. Li, Robert W. Cottingham, David T. Kingsbury
1996 J jnl
Improvements to the GDB Human Genome Data Base.
Nucleic Acids Res.
Kenneth H. Fasman, Stanley Letovsky, Robert W. Cottingham, David T. Kingsbury