Robert S. Chapkin

12 papers A* 1A 1Journal 8Unranked 2
YearRankTypeTitle / Venue / Authors
2025 J jnl
A Quantum Generative Framework for Modeling Single-Cell Transcriptomes with Gene-Gene and Cell-Cell Interactions.
CoRR
Selim Romero, Vignesh Kumar, Robert S. Chapkin, James J. Cai
2025 J jnl
Quantum annealing for enhanced feature selection in single-cell RNA sequencing data analysis.
Quantum Mach. Intell.
Selim Romero, Shreyan Gupta, Victoria Gatlin, Robert S. Chapkin, James J. Cai
2024 J jnl
Graphical Dirichlet Process for Clustering Non-Exchangeable Grouped Data.
J. Mach. Learn. Res.
Arhit Chakrabarti, Yang Ni, Ellen Ruth A. Morris, Michael L. Salinas, Robert S. Chapkin, Bani K. Mallick
2024 J jnl
Quantum Annealing for Enhanced Feature Selection in Single-Cell RNA Sequencing Data Analysis.
CoRR
Selim Romero, Shreyan Gupta, Victoria Gatlin, Robert S. Chapkin, James J. Cai
2022 J jnl
scTenifoldKnk: An efficient virtual knockout tool for gene function predictions via single-cell gene regulatory network perturbation.
Patterns
Daniel Osório, Yan Zhong, Guanxun Li, Qian Xu, Yongjian Yang, Yanan Tian, Robert S. Chapkin, Jianhua Z. Huang, James J. Cai
2020 A* conf
Bayesian Causal Structural Learning with Zero-Inflated Poisson Bayesian Networks.
NeurIPS
Junsouk Choi, Robert S. Chapkin, Yang Ni
2018 J jnl
Detecting Multivariate Gene Interactions in RNA-Seq Data Using Optimal Bayesian Classification.
IEEE ACM Trans. Comput. Biol. Bioinform.
Jason M. Knight, Ivan Ivanov, Karen Triff, Robert S. Chapkin, Edward R. Dougherty
2016 — conf
Model-based study of the Effectiveness of Reporting Lists of Small Feature Sets using RNA-Seq Data.
BCB
Eunji Kim, Ivan Ivanov, Jianping Hua, Robert S. Chapkin, Edward R. Dougherty
2012 A conf
Feature Selection for High-dimensional Integrated Data.
SDM
Charles Zheng, Scott Schwartz, Robert S. Chapkin, Raymond J. Carroll, Ivan Ivanov
2010 — conf
Conditioning-based model for the regulatory activities of microRNAs in specific dietary contexts.
GENSiPS
Chen Zhao, Ivan Ivanov, Manasvi Shah, Laurie A. Davidson, Robert S. Chapkin, Edward R. Dougherty
2010 J jnl
Evaluation of fecal mRNA reproducibility via a marginal transformed mixture modeling approach.
BMC Bioinform.
Nysia I. George, Joanne R. Lupton, Nancy D. Turner, Robert S. Chapkin, Laurie A. Davidson, Naisyin Wang
2005 J jnl
A two-stage normalization method for partially degraded mRNA microarray data.
Bioinform.
Li-Yu Daisy Liu, Naisyin Wang, Joanne R. Lupton, Nancy D. Turner, Robert S. Chapkin, Laurie A. Davidson