Robert Preissner

66 papers Journal 60Unranked 6
YearRankTypeTitle / Venue / Authors
2024 J jnl
An exploration into CTEPH medications: Combining natural language processing, embedding learning, in vitro models, and real-world evidence for drug repurposing.
PLoS Comput. Biol.
Daniel Steiert, Corey Wittig, Priyanka Banerjee, Robert Preissner, Robert Szulcek
2023 J jnl
SuperNatural 3.0 - a database of natural products and natural product-based derivatives.
Nucleic Acids Res.
Kathleen Gallo, Emanuel Kemmler, Andrean Goede, Finnja Becker, Mathias Dunkel, Robert Preissner, Priyanka Banerjee
2022 J jnl
SuperPred 3.0: drug classification and target prediction - a machine learning approach.
Nucleic Acids Res.
Kathleen Gallo, Andrean Goede, Robert Preissner, Björn-Oliver Gohlke
2021 J jnl
PROMISCUOUS 2.0: a resource for drug-repositioning.
Nucleic Acids Res.
Kathleen Gallo, Andrean Goede, Andreas Eckert, Barbara Moahamed, Robert Preissner, Björn-Oliver Gohlke
2021 J jnl
Translational suppression of SARS-COV-2 ORF8 protein mRNA as a Viable therapeutic target against COVID-19: Computational studies on potential roles of isolated compounds from
Comput. Biol. Medicine
Ochuko L. Erukainure, Olubunmi Atolani, Aliyu Muhammad, Rahul Ravichandran, Musa M. Abarshi, Sanusi B. Katsayal, Chika I. Chukwuma, Robert Preissner, Priyanka Banerjee, M. Ahmed Mesaik
2021 J jnl
VirtualTaste: a web server for the prediction of organoleptic properties of chemical compounds.
Nucleic Acids Res.
Franziska Fritz, Robert Preissner, Priyanka Banerjee
2021 J jnl
Voronoia 4-ever.
Nucleic Acids Res.
René Staritzbichler, Nikola Ristic, Andrean Goede, Robert Preissner, Peter Werner Hildebrand
2020 J jnl
SuperCYPsPred - a web server for the prediction of cytochrome activity.
Nucleic Acids Res.
Priyanka Banerjee, Mathias Dunkel, Emanuel Kemmler, Robert Preissner
2018 J jnl
Exploring Activity Profiles of PAINS and Their Structural Context in Target-Ligand Complexes.
J. Chem. Inf. Model.
Vishal B. Siramshetty, Robert Preissner, Björn-Oliver Gohlke
2018 J jnl
ProTox-II: a webserver for the prediction of toxicity of chemicals.
Nucleic Acids Res.
Priyanka Banerjee, Andreas Eckert, Anna K. Schrey, Robert Preissner
2018 J jnl
SuperDRUG2: a one stop resource for approved/marketed drugs.
Nucleic Acids Res.
Vishal B. Siramshetty, Andreas Eckert, Björn-Oliver Gohlke, Andrean Goede, Qiaofeng Chen, Prashanth Devarakonda, Saskia Preissner, Robert Preissner
2018 J jnl
The Catch-22 of Predicting hERG Blockade Using Publicly Accessible Bioactivity Data.
J. Chem. Inf. Model.
Vishal B. Siramshetty, Qiaofeng Chen, Prashanth Devarakonda, Robert Preissner
2018 J jnl
mVOC 2.0: a database of microbial volatiles.
Nucleic Acids Res.
Marie Chantal Lemfack, Björn-Oliver Gohlke, Serge M. T. Toguem, Saskia Preissner, Birgit Piechulla, Robert Preissner
2016 J jnl
CancerResource - updated database of cancer-relevant proteins, mutations and interacting drugs.
Nucleic Acids Res.
Björn-Oliver Gohlke, Janette Nickel, Raik Otto, Mathias Dunkel, Robert Preissner
2016 J jnl
Computational methods for prediction of in vitro effects of new chemical structures.
J. Cheminformatics
Priyanka Banerjee, Vishal B. Siramshetty, Malgorzata N. Drwal, Robert Preissner
2016 J jnl
SL2: an interactive webtool for modeling of missing segments in proteins.
Nucleic Acids Res.
Jochen Ismer, Alexander S. Rose, Johanna K. S. Tiemann, Andrean Goede, Robert Preissner, Peter W. Hildebrand
2016 J jnl
WITHDRAWN - a resource for withdrawn and discontinued drugs.
Nucleic Acids Res.
Vishal B. Siramshetty, Janette Nickel, Christian Omieczynski, Björn-Oliver Gohlke, Malgorzata N. Drwal, Robert Preissner
2015 J jnl
2D and 3D similarity landscape analysis identifies PARP as a novel off-target for the drug Vatalanib.
BMC Bioinform.
Björn-Oliver Gohlke, Tim Overkamp, Anja Richter, Antje Richter, Peter T. Daniel, Bernd Gillissen, Robert Preissner
2015 J jnl
Super Natural II - a database of natural products.
Nucleic Acids Res.
Priyanka Banerjee, Jevgeni Erehman, Björn-Oliver Gohlke, Thomas Wilhelm, Robert Preissner, Mathias Dunkel
2014 J jnl
ProTox: a web server for the
Nucleic Acids Res.
Malgorzata N. Drwal, Priyanka Banerjee, Mathias Dunkel, Martin R. Wettig, Robert Preissner
2014 J jnl
SuperPain - a resource on pain-relieving compounds targeting ion channels.
Nucleic Acids Res.
Björn O. Gohlke, Robert Preissner, Saskia Preissner
2014 J jnl
SuperPred: update on drug classification and target prediction.
Nucleic Acids Res.
Janette Nickel, Björn-Oliver Gohlke, Jevgeni Erehman, Priyanka Banerjee, Wen Wei Rong, Andrean Goede, Mathias Dunkel, Robert Preissner
2014 J jnl
The Transformer database: biotransformation of xenobiotics.
Nucleic Acids Res.
Michael F. Hoffmann, Sarah C. Preissner, Janette Nickel, Mathias Dunkel, Robert Preissner, Saskia Preissner
2014 J jnl
mVOC: a database of microbial volatiles.
Nucleic Acids Res.
Marie Chantal Lemfack, Janette Nickel, Mathias Dunkel, Robert Preissner, Birgit Piechulla
2013 J jnl
SynSysNet: integration of experimental data on synaptic protein-protein interactions with drug-target relations.
Nucleic Acids Res.
Joachim von Eichborn, Mathias Dunkel, Björn O. Gohlke, Sarah C. Preissner, Michael F. Hoffmann, Jakob M. J. Bauer, J. Douglas Armstrong, Martin H. Schaefer, Miguel A. Andrade-Navarro, Nicolas Le Novère, Michael D. R. Croning, Seth G. N. Grant, Pim van Nierop, August B. Smit, Robert Preissner
2013 J jnl
VaccImm: simulating peptide vaccination in cancer therapy.
BMC Bioinform.
Joachim von Eichborn, Anna Lena Woelke, Filippo Castiglione, Robert Preissner
2012 J jnl
SuperTarget goes quantitative: update on drug-target interactions.
Nucleic Acids Res.
Nikolai Hecker, Jessica Ahmed, Joachim von Eichborn, Mathias Dunkel, Karel Macha, Andreas Eckert, Michael K. Gilson, Philip E. Bourne, Robert Preissner
2011 J jnl
CancerResource: a comprehensive database of cancer-relevant proteins and compound interactions supported by experimental knowledge.
Nucleic Acids Res.
Jessica Ahmed, Thomas Meinel, Mathias Dunkel, Manuela S. Murgueitio, Robert Adams, Corinna Blasse, Andreas Eckert, Saskia Preissner, Robert Preissner
2011 J jnl
Cobweb: a Java applet for network exploration and visualisation.
Bioinform.
Joachim von Eichborn, Philip E. Bourne, Robert Preissner
2011 J jnl
FragmentStore - a comprehensive database of fragments linking metabolites, toxic molecules and drugs.
Nucleic Acids Res.
Jessica Ahmed, Catherine L. Worth, Paul Florian Thaben, Christian Matzig, Corinna Blasse, Mathias Dunkel, Robert Preissner
2011 J jnl
PROMISCUOUS: a database for network-based drug-repositioning.
Nucleic Acids Res.
Joachim von Eichborn, Manuela S. Murgueitio, Mathias Dunkel, Soeren Koerner, Philip E. Bourne, Robert Preissner
2011 J jnl
SDM - a server for predicting effects of mutations on protein stability and malfunction.
Nucleic Acids Res.
Catherine L. Worth, Robert Preissner, Tom L. Blundell
2011 J jnl
SuperSweet - a resource on natural and artificial sweetening agents.
Nucleic Acids Res.
Jessica Ahmed, Saskia Preissner, Mathias Dunkel, Catherine L. Worth, Andreas Eckert, Robert Preissner
2010 J jnl
SuperCYP: a comprehensive database on Cytochrome P450 enzymes including a tool for analysis of CYP-drug interactions.
Nucleic Acids Res.
Saskia Preissner, Katharina Kroll, Mathias Dunkel, Christian Senger, Gady Goldsobel, Daniel Kuzman, Stefan Günther, Rainer Winnenburg, Michael Schroeder, Robert Preissner
2009 J jnl
Computer-assisted identification of small-molecule Bcl-2 modulators.
Comput. Biol. Chem.
Melanie Füllbeck, Nina Gebhardt, Julia Hossbach, Peter T. Daniel, Robert Preissner
2009 J jnl
Fast Structural Alignment of Biomolecules Using a Hash Table, N-Grams and String Descriptors.
Algorithms
Raphael André Bauer, Kristian Rother, Peter Moor, Knut Reinert, Thomas Steinke, Janusz M. Bujnicki, Robert Preissner
2009 J jnl
JAIL: a structure-based interface library for macromolecules.
Nucleic Acids Res.
Stefan Günther, Joachim von Eichborn, Patrick May, Robert Preissner
2009 J jnl
SuperLooper - a prediction server for the modeling of loops in globular and membrane proteins.
Nucleic Acids Res.
Peter Werner Hildebrand, Andrean Goede, Raphael A. Bauer, Björn A. Grüning, Jochen Ismer, Elke Michalsky, Robert Preissner
2009 J jnl
SuperScent - a database of flavors and scents.
Nucleic Acids Res.
Mathias Dunkel, Ulrike Schmidt, Swantje Struck, Lena Berger, Björn A. Grüning, Julia Hossbach, Ines S. Jaeger, Uta Effmert, Birgit Piechulla, Roger Eriksson, Jette Knudsen, Robert Preissner
2009 J jnl
SuperSite: dictionary of metabolite and drug binding sites in proteins.
Nucleic Acids Res.
Raphael André Bauer, Stefan Günther, Dominic Jansen, Carolin Heeger, Paul Florian Thaben, Robert Preissner
2009 J jnl
SuperToxic: a comprehensive database of toxic compounds.
Nucleic Acids Res.
Ulrike Schmidt, Swantje Struck, Björn A. Grüning, Julia Hossbach, Ines S. Jaeger, Roza Parol, Ulrike Lindequist, Eberhard Teuscher, Robert Preissner
2009 J jnl
Voronoia: analyzing packing in protein structures.
Nucleic Acids Res.
Kristian Rother, Peter Werner Hildebrand, Andrean Goede, Björn A. Grüning, Robert Preissner
2008 J jnl
SuperPred: drug classification and target prediction.
Nucleic Acids Res.
Mathias Dunkel, Stefan Günther, Jessica Ahmed, Burghardt Wittig, Robert Preissner
2008 J jnl
SuperTarget and Matador: resources for exploring drug-target relationships.
Nucleic Acids Res.
Stefan Günther, Michael Kuhn, Mathias Dunkel, Monica Campillos, Christian Senger, Evangelia Petsalaki, Jessica Ahmed, Eduardo Garcia Urdiales, Andreas Gewiess, Lars Juhl Jensen, Reinhard Schneider, Roman Skoblo, Robert B. Russell, Philip E. Bourne, Peer Bork, Robert Preissner
2008 J jnl
Superimposé: a 3D structural superposition server.
Nucleic Acids Res.
Raphael A. Bauer, Philip E. Bourne, Arno Formella, Cornelius Frömmel, Christoph Gille, Andrean Goede, Aysam Guerler, Andreas Hoppe, Ernst-Walter Knapp, Thorsten Pöschel, Burghardt Wittig, Valentin Ziegler, Robert Preissner
2007 — conf
Cellular Fingerprints: A Novel Concept for the Integration of Experimental Data and Compound-Target-Pathway Relations (Extended Abstract).
BSB
Stefan Günther, Stefanie Neumann, Jessica Ahmed, Robert Preissner
2007 J jnl
SuperHapten: a comprehensive database for small immunogenic compounds.
Nucleic Acids Res.
Stefan Günther, Dorothea Hempel, Mathias Dunkel, Kristian Rother, Robert Preissner
2006 J jnl
A structural keystone for drug design.
J. Integr. Bioinform.
Kristian Rother, Mathias Dunkel, Elke Michalsky, Silke Trißl, Andrean Goede, Ulf Leser, Robert Preissner
2006 J jnl
Representation of target-bound drugs by computed conformers: implications for conformational libraries.
BMC Bioinform.
Stefan Günther, Christian Senger, Elke Michalsky, Andrean Goede, Robert Preissner
2006 J jnl
SuperMimic - Fitting peptide mimetics into protein structures.
BMC Bioinform.
Andrean Goede, Elke Michalsky, Ulrike Schmidt, Robert Preissner
2006 J jnl
SuperNatural: a searchable database of available natural compounds.
Nucleic Acids Res.
Mathias Dunkel, Melanie Füllbeck, Stefanie Neumann, Robert Preissner
2005 J jnl
Columba: an integrated database of proteins, structures, and annotations.
BMC Bioinform.
Silke Trißl, Kristian Rother, Heiko Müller, Thomas Steinke, Ina Koch, Robert Preissner, Cornelius Frömmel, Ulf Leser
2005 J jnl
SUPERFICIAL - Surface mapping of proteins via structure-based peptide library design.
BMC Bioinform.
Andrean Goede, Ines S. Jaeger, Robert Preissner
2005 J jnl
SuperDrug: a conformational drug database.
Bioinform.
Andrean Goede, Mathias Dunkel, Nina Mester, Cornelius Frömmel, Robert Preissner
2005 J jnl
SuperLigands - a database of ligand structures derived from the Protein Data Bank.
BMC Bioinform.
Elke Michalsky, Mathias Dunkel, Andrean Goede, Robert Preissner
2004 — conf
Columba: Multidimensional Data Integration of Protein Annotations.
DILS
Kristian Rother, Heiko Müller, Silke Trißl, Ina Koch, Thomas Steinke, Robert Preissner, Cornelius Frömmel, Ulf Leser
2004 J jnl
Comparison of 2
J. Chem. Inf. Model.
Martin Thimm, Andrean Goede, Stefan Hougardy, Robert Preissner
2003 J jnl
Accelerating screening of 3D protein data with a graph theoretical approach.
Bioinform.
Cornelius Frömmel, Christoph Gille, Andrean Goede, Clemens Gröpl, Stefan Hougardy, Till Nierhoff, Robert Preissner, Martin Thimm
2003 J jnl
Inhomogeneous molecular density: reference packing densities and distribution of cavities within proteins.
Bioinform.
Kristian Rother, Robert Preissner, Andrean Goede, Cornelius Frömmel
2001 J jnl
Matching organic libraries with protein-substructures.
J. Comput. Aided Mol. Des.
Robert Preissner, Andrean Goede, Kristian Rother, F. Osterkamp, U. Koert, Cornelius Frömmel
1999 J jnl
Homonyms and synonyms in the Dictionary of Interfaces in Proteins (DIP).
Bioinform.
Robert Preissner, Andrean Goede, Cornelius Frömmel
1999 — conf
Interfaces of Secondary Structural Elements in Proteins - Evolution of Atomic Substructures -.
German Conference on Bioinformatics
Christoph Gille, Andrean Goede, Kristian Rother, Robert Preissner, Cornelius Frömmel
1998 — conf
A procedure for superposition of two arbitrary atomic arrangements.
German Conference on Bioinformatics
Andrean Goede, Robert Preissner, Cornelius Frömmel
1998 — conf
Atomic patch similarity as a criterion of evolutionary relationship between proteins.
German Conference on Bioinformatics
Christoph Gille, Andrean Goede, Robert Preissner, Cornelius Frömmel
1998 — conf
Dictionary of Interfaces in Proteins (DIP). Data Bank of complementary molecular surface patches.
German Conference on Bioinformatics
Robert Preissner, Andrean Goede, Cornelius Frömmel
1997 J jnl
Voronoi cell: New method for allocation of space among atoms: Elimination of avoidable errors in calculation of atomic volume and density.
J. Comput. Chem.
Andrean Goede, Robert Preissner, Cornelius Frömmel