Robert C. Edgar

14 papers Misc 1Journal 11Unranked 2
YearRankTypeTitle / Venue / Authors
2024 J jnl
Protein structure alignment by Reseek improves sensitivity to remote homologs.
Bioinform.
Robert C. Edgar
2018 J jnl
Updating the 97% identity threshold for 16S ribosomal RNA OTUs.
Bioinform.
Robert C. Edgar
2015 J jnl
Error filtering, pair assembly and error correction for next-generation sequencing reads.
Bioinform.
Robert C. Edgar, Henrik Flyvbjerg
2011 J jnl
UCHIME improves sensitivity and speed of chimera detection.
Bioinform.
Robert C. Edgar, Brian J. Haas, José Carlos Clemente, Christopher Quince, Rob Knight
2010 J jnl
Search and clustering orders of magnitude faster than BLAST.
Bioinform.
Robert C. Edgar
2009 J jnl
Optimizing substitution matrix choice and gap parameters for sequence alignment.
BMC Bioinform.
Robert C. Edgar
2007 J jnl
PILER-CR: Fast and accurate identification of CRISPR repeats.
BMC Bioinform.
Robert C. Edgar
2005 — conf
PILER: identification and classification of genomic repeats.
ISMB (Supplement of Bioinformatics)
Robert C. Edgar, Eugene W. Myers
2004 J jnl
A comparison of scoring functions for protein sequence profile alignment.
Bioinform.
Robert C. Edgar, Kimmen Sjölander
2004 J jnl
COACH: profile-profile alignment of protein families using hidden Markov models.
Bioinform.
Robert C. Edgar, Kimmen Sjölander
2004 — conf
MUSCLE: Multiple Sequence Alignment with Improved Accuracy and Speed.
CSB
Robert C. Edgar
2004 J jnl
MUSCLE: a multiple sequence alignment method with reduced time and space complexity.
BMC Bioinform.
Robert C. Edgar
2003 J jnl
SATCHMO: Sequence Alignment and Tree Construction Using Hidden Markov Models.
Bioinform.
Robert C. Edgar, Kimmen Sjölander
2003 Misc conf
Simultaneous Sequence Alignment and Tree Construction Using Hidden Markov Models.
Pacific Symposium on Biocomputing
Robert C. Edgar, Kimmen Sjölander