Robert Brijder

86 papers A 2B 8C 5Journal 60Unranked 8

Year	Rank	Type	Title / Venue / Authors
2026	J	`jnl`	Algorithm Support for Graph Databases, Done Right. CoRR Daan de Graaf, Robert Brijder, Soham Chakraborty, George Fletcher, Bram Van De Wall, Nikolay Yakovets
2022	J	`jnl`	A characterization of circle graphs in terms of total unimodularity. Eur. J. Comb. Robert Brijder, Lorenzo Traldi
2022	J	`jnl`	On matrices and K-relations. Ann. Math. Artif. Intell. Robert Brijder, Marc Gyssens, Jan Van den Bussche
2021	J	`jnl`	DNAQL: a query language for DNA sticker complexes. Nat. Comput. Robert Brijder, Joris J. M. Gillis, Jan Van den Bussche
2020	J	`jnl`	A Characterization of Circle Graphs in Terms of Multimatroid Representations. Electron. J. Comb. Robert Brijder, Lorenzo Traldi
2020	J	`jnl`	Counterexamples to a conjecture of Las Vergnas. Eur. J. Comb. Robert Brijder, Hendrik Jan Hoogeboom
2020	—	`conf`	On Matrices and K-Relations. FoIKS Robert Brijder, Marc Gyssens, Jan Van den Bussche
2019	J	`jnl`	Computing with chemical reaction networks: a tutorial. Nat. Comput. Robert Brijder
2019	J	`jnl`	MATLANG: Matrix operations and their expressive power. SIGMOD Rec. Robert Brijder, Floris Geerts, Jan Van den Bussche, Timmy Weerwag
2019	J	`jnl`	On matrices and K-relations. CoRR Robert Brijder, Marc Gyssens, Jan Van den Bussche
2019	J	`jnl`	On the Expressive Power of Query Languages for Matrices. ACM Trans. Database Syst. Robert Brijder, Floris Geerts, Jan Van den Bussche, Timmy Weerwag
2018	J	`jnl`	Computing with Chemical Reaction Networks: A Tutorial. CoRR Robert Brijder
2018	J	`jnl`	Democratic, existential, and consensus-based output conventions in stable computation by chemical reaction networks. Nat. Comput. Robert Brijder, David Doty, David Soloveichik
2018	A	`conf`	On the Expressive Power of Query Languages for Matrices. ICDT Robert Brijder, Floris Geerts, Jan Van den Bussche, Timmy Weerwag
2018	J	`jnl`	Orienting transversals and transition polynomials of multimatroids. Adv. Appl. Math. Robert Brijder
2018	J	`jnl`	Preface. Nat. Comput. Robert Brijder, Lulu Qian
2017	B	`ed.`	DNA Computing and Molecular Programming - 23rd International Conference, DNA 2017, Austin, TX, USA, September 24-28, 2017, Proceedings DNA Robert Brijder, Lulu Qian
2017	J	`jnl`	Dominance and deficiency for Petri nets and chemical reaction networks. Nat. Comput. Robert Brijder
2017	J	`jnl`	Isotropic Matroids III: Connectivity. Electron. J. Comb. Robert Brijder, Lorenzo Traldi
2017	J	`jnl`	On the expressive power of query languages for matrices. CoRR Robert Brijder, Floris Geerts, Jan Van den Bussche, Timmy Weerwag
2017	J	`jnl`	Sorting by Reversals and the Theory of 4-Regular Graphs. CoRR Robert Brijder
2017	J	`jnl`	Sorting by reversals and the theory of 4-regular graphs. Theor. Comput. Sci. Robert Brijder
2016	J	`jnl`	Isotropic Matroids I: Multimatroids and Neighborhoods. Electron. J. Comb. Robert Brijder, Lorenzo Traldi
2016	J	`jnl`	Isotropic Matroids II: Circle Graphs. Electron. J. Comb. Robert Brijder, Lorenzo Traldi
2016	J	`jnl`	Minimal output unstable configurations in chemical reaction networks and deciders. Nat. Comput. Robert Brijder
2016	B	`conf`	Robustness of Expressivity in Chemical Reaction Networks. DNA Robert Brijder, David Doty, David Soloveichik
2016	J	`jnl`	Robustness of expressivity in chemical reaction networks. CoRR Robert Brijder, David Doty, David Soloveichik
2015	J	`jnl`	Dominance and Deficiency for Petri Nets and Chemical Reaction Networks. CoRR Robert Brijder
2015	B	`conf`	Dominance and T-Invariants for Petri Nets and Chemical Reaction Networks. DNA Robert Brijder
2015	J	`jnl`	Recombination faults in gene assembly in ciliates modeled using multimatroids. Theor. Comput. Sci. Robert Brijder
2014	C	`conf`	Graph Polynomials Motivated by Gene Rearrangements in Ciliates. CiE Robert Brijder, Hendrik Jan Hoogeboom
2014	J	`jnl`	Interlace polynomials for multimatroids and delta-matroids. Eur. J. Comb. Robert Brijder, Hendrik Jan Hoogeboom
2014	B	`conf`	Output Stability and Semilinear Sets in Chemical Reaction Networks and Deciders. DNA Robert Brijder
2014	J	`jnl`	Output Stability and Semilinear Sets in Chemical Reaction Networks and Deciders. CoRR Robert Brijder
2014	—	`ch.`	The Algebra of Gene Assembly in Ciliates. Discrete and Topological Models in Molecular Biology Robert Brijder, Hendrik Jan Hoogeboom
2013	J	`jnl`	Graph-theoretic formalization of hybridization in DNA sticker complexes. Nat. Comput. Robert Brijder, Joris J. M. Gillis, Jan Van den Bussche
2013	J	`jnl`	Nullity and Loop Complementation for Delta-Matroids. SIAM J. Discret. Math. Robert Brijder, Hendrik Jan Hoogeboom
2013	J	`jnl`	On the inference of non-confluent NLC graph grammars. J. Log. Comput. Robert Brijder, Hendrik Blockeel
2013	J	`jnl`	The Adjacency Matroid of a Graph. Electron. J. Comb. Lorenzo Traldi, Robert Brijder, Hendrik Jan Hoogeboom
2013	A	`conf`	The DNA query language DNAQL. ICDT Robert Brijder, Joris J. M. Gillis, Jan Van den Bussche
2012	B	`conf`	A Type System for DNAQL. DNA Robert Brijder, Joris J. M. Gillis, Jan Van den Bussche
2012	J	`jnl`	A comparison of graph-theoretic DNA hybridization models. Theor. Comput. Sci. Robert Brijder, Joris J. M. Gillis, Jan Van den Bussche
2012	J	`jnl`	Binary Symmetric Matrix Inversion Through Local Complementation. Fundam. Informaticae Robert Brijder, Hendrik Jan Hoogeboom
2012	—	`ch.`	Computational Nature of Gene Assembly in Ciliates. Handbook of Natural Computing Robert Brijder, Mark Daley, Tero Harju, Natasa Jonoska, Ion Petre, Grzegorz Rozenberg
2012	J	`jnl`	Pivots, determinants, and perfect matchings of graphs. Theor. Comput. Sci. Robert Brijder, Tero Harju, Hendrik Jan Hoogeboom
2012	—	`conf`	Representing Reaction Systems by Trees. Computation, Physics and Beyond Robert Brijder, Andrzej Ehrenfeucht, Grzegorz Rozenberg
2011	J	`jnl`	A Tour of reaction Systems. Int. J. Found. Comput. Sci. Robert Brijder, Andrzej Ehrenfeucht, Michael G. Main, Grzegorz Rozenberg
2011	C	`conf`	Characterizing Compressibility of Disjoint Subgraphs with NLC Grammars. LATA Robert Brijder, Hendrik Blockeel
2011	B	`conf`	Graph-Theoretic Formalization of Hybridization in DNA Sticker Complexes. DNA Robert Brijder, Joris J. M. Gillis, Jan Van den Bussche
2011	J	`jnl`	On aggregation in multiset-based self-assembly of graphs. Nat. Comput. Francesco Bernardini, Robert Brijder, Matteo Cavaliere, Giuditta Franco, Hendrik Jan Hoogeboom, Grzegorz Rozenberg
2011	—	`conf`	Reaction Systems with Duration. Computation, Cooperation, and Life Robert Brijder, Andrzej Ehrenfeucht, Grzegorz Rozenberg
2011	J	`jnl`	The group structure of pivot and loop complementation on graphs and set systems. Eur. J. Comb. Robert Brijder, Hendrik Jan Hoogeboom
2010	J	`jnl`	A Note on Causalities in Reaction Systems. Electron. Commun. Eur. Assoc. Softw. Sci. Technol. Robert Brijder, Andrzej Ehrenfeucht, Grzegorz Rozenberg
2010	J	`jnl`	Combining overlap and containment for gene assembly in ciliates. Theor. Comput. Sci. Robert Brijder, Hendrik Jan Hoogeboom
2010	J	`jnl`	Extended strings and graphs for simple gene assembly. Theor. Comput. Sci. Robert Brijder, Miika Langille, Ion Petre
2010	J	`jnl`	Maximal pivots on graphs with an application to gene assembly. Discret. Appl. Math. Robert Brijder, Hendrik Jan Hoogeboom
2010	C	`conf`	Pivot and Loop Complementation on Graphs and Set Systems. TAMC Robert Brijder, Hendrik Jan Hoogeboom
2009	J	`jnl`	Maximal Pivots on Graphs with an Application to Gene Assembly CoRR Robert Brijder, Hendrik Jan Hoogeboom
2009	J	`jnl`	Non-Confluent NLC Graph Grammar Inference by Compressing Disjoint Subgraphs. CoRR Hendrik Blockeel, Robert Brijder
2009	J	`jnl`	Nullity Invariance for Pivot and the Interlace Polynomial CoRR Robert Brijder, Hendrik Jan Hoogeboom
2009	J	`jnl`	Perfectly quilted rectangular snake tilings. Theor. Comput. Sci. Robert Brijder, Hendrik Jan Hoogeboom
2009	—	`conf`	Reality-and-Desire in Ciliates. Algorithmic Bioprocesses Robert Brijder, Hendrik Jan Hoogeboom
2009	J	`jnl`	Reduction Graphs from Overlap Graphs for Gene Assembly in Ciliates. Int. J. Found. Comput. Sci. Robert Brijder, Hendrik Jan Hoogeboom, Grzegorz Rozenberg
2009	J	`jnl`	The Group Structure of Pivot and Loop Complementation on Graphs and Set Systems CoRR Robert Brijder, Hendrik Jan Hoogeboom
2008	C	`conf`	Extending the Overlap Graph for Gene Assembly in Ciliates. LATA Robert Brijder, Hendrik Jan Hoogeboom
2008	J	`jnl`	Membrane systems with proteins embedded in membranes. Theor. Comput. Sci. Robert Brijder, Matteo Cavaliere, Agustin Riscos-Núñez, Grzegorz Rozenberg, Dragos Sburlan
2008	—	`—`	Models of natural computation: gene assembly and membrane systems. Robert Brijder
2008	J	`jnl`	Strategies of loop recombination in ciliates. Discret. Appl. Math. Robert Brijder, Hendrik Jan Hoogeboom, Michael Muskulus
2008	J	`jnl`	The fibers and range of reduction graphs in ciliates. Acta Informatica Robert Brijder, Hendrik Jan Hoogeboom
2007	B	`conf`	A String-Based Model for Simple Gene Assembly. FCT Robert Brijder, Miika Langille, Ion Petre
2007	C	`conf`	Characterizing Reduction Graphs for Gene Assembly in Ciliates. Developments in Language Theory Robert Brijder, Hendrik Jan Hoogeboom
2007	J	`jnl`	Cycles and communicating classes in membrane systems and molecular dynamics. Theor. Comput. Sci. Michael Muskulus, Daniela Besozzi, Robert Brijder, Paolo Cazzaniga, Sanne Houweling, Dario Pescini, Grzegorz Rozenberg
2007	J	`jnl`	Extending the Overlap Graph for Gene Assembly in Ciliates CoRR Robert Brijder, Hendrik Jan Hoogeboom
2007	B	`conf`	From Micro to Macro: How the Overlap Graph Determines the Reduction Graph in Ciliates. FCT Robert Brijder, Hendrik Jan Hoogeboom, Grzegorz Rozenberg
2007	J	`jnl`	How Overlap Determines the Macronuclear Genes in Ciliates CoRR Robert Brijder, Hendrik Jan Hoogeboom, Grzegorz Rozenberg
2007	J	`jnl`	Multiset-Based Self-Assembly of Graphs. Fundam. Informaticae Francesco Bernardini, Robert Brijder, Grzegorz Rozenberg, Claudio Zandron
2007	J	`jnl`	The Fibers and Range of Reduction Graphs in Ciliates CoRR Robert Brijder, Hendrik Jan Hoogeboom
2006	—	`conf`	Applicability of Loop Recombination in Ciliates Using the Breakpoint Graph. CompLife Robert Brijder, Hendrik Jan Hoogeboom, Michael Muskulus
2006	J	`jnl`	Communication Membrane Systems with Active Symports. J. Autom. Lang. Comb. Robert Brijder, Matteo Cavaliere, Agustin Riscos-Núñez, Grzegorz Rozenberg, Dragos Sburlan
2006	J	`jnl`	Complexity of bio-computation: symbolic dynamics in membrane systems. Int. J. Found. Comput. Sci. Michael Muskulus, Robert Brijder
2006	—	`conf`	Membrane Systems with External Control. Workshop on Membrane Computing Robert Brijder, Matteo Cavaliere, Agustin Riscos-Núñez, Grzegorz Rozenberg, Dragos Sburlan
2006	—	`conf`	Membrane Systems with Marked Membranes. MeCBIC@ICALP Robert Brijder, Matteo Cavaliere, Agustin Riscos-Núñez, Grzegorz Rozenberg, Dragos Sburlan
2006	J	`jnl`	Reducibility of Gene Patterns in Ciliates using the Breakpoint Graph CoRR Robert Brijder, Hendrik Jan Hoogeboom, Grzegorz Rozenberg
2006	J	`jnl`	Reducibility of gene patterns in ciliates using the breakpoint graph. Theor. Comput. Sci. Robert Brijder, Hendrik Jan Hoogeboom, Grzegorz Rozenberg
2006	J	`jnl`	Strategies of Loop Recombination in Ciliates CoRR Robert Brijder, Hendrik Jan Hoogeboom, Michael Muskulus
2005	—	`conf`	The Breakpoint Graph in Ciliates. CompLife Robert Brijder, Hendrik Jan Hoogeboom, Grzegorz Rozenberg